RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 B4DXG7 233 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 H3BN98 237 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 GOLGA8MH3BSY2 632 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 SULT2B1O00204 365 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 DCTN6O00399 190 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 CCL21O00585 134 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 TYROBPO43914 113 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 CHST1O43916 411 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 EFNA2O43921 213 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 PCDH7O60245 1069 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 MGRN1O60291 552 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 CDC40O60508 579 aaKnown RBP eCLIP1.75□□□□□ -2.13
RTF1-207ENST00000561076 EIF4E2O60573 245 aaKnown RBP1.75□□□□□ -2.13
RTF1-207ENST00000561076 MAGEC1O60732 1142 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 RAMP1O60894 148 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 CNOT3O75175 753 aaKnown RBP1.75□□□□□ -2.13
RTF1-207ENST00000561076 PROP1O75360 226 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 TRMUO75648 421 aaKnown RBP1.75□□□□□ -2.13
RTF1-207ENST00000561076 SC5DO75845 299 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 TRAPPC6AO75865 159 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 VAPBO95292 243 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 HPP00738 406 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 OAS1P00973 400 aaKnown RBP1.75□□□□□ -2.13
RTF1-207ENST00000561076 IGHV4-59P01825 116 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 HBE1P02100 147 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 GCP02774 474 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 SP1P08047 785 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 HOXB7P09629 217 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 TRIM49P0CI25 452 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 TRIM49CP0CI26 452 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 IGHV4-38-2P0DP08 117 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 NPR2P20594 1047 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 IL32P24001 234 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 IVDP26440 423 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 CFPP27918 469 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 HOXA9P31269 272 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 P2RY2P41231 377 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 ACTR1BP42025 376 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 YAP1P46937 504 aaKnown RBP1.75□□□□□ -2.13
RTF1-207ENST00000561076 RGS6P49758 472 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 HLCSP50747 726 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 ATP4BP51164 291 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 XKP51811 444 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 EFNA3P52797 238 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 CRYBA2P53672 197 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 MFAP2P55001 183 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 PAX9P55771 341 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 CLDN6P56747 220 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 FBXW4P57775 412 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 OR2B6P58173 313 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 GPX6P59796 221 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 OR2B8PP59922 312 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 RAB14P61106 215 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 RND3P61587 244 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 ACTA2P62736 377 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 RPS27AP62979 156 aaKnown RBP1.75□□□□□ -2.13
RTF1-207ENST00000561076 ACTG2P63267 376 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 ACTC1P68032 377 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 ACTA1P68133 377 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 SLC35B1P78383 322 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 KDSRQ06136 332 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 BCL2L1Q07817 233 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 ST3GAL3Q11203 375 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 TWF1Q12792 350 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 STX4Q12846 297 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 FOXE3Q13461 319 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 KIAA0141Q14154 515 aaPredicted RBP1.75□□□□□ -2.13
RTF1-207ENST00000561076 ARL6IP1Q15041 203 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 TAB1Q15750 504 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 CD226Q15762 336 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 ZIC1Q15915 447 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 GABRA6Q16445 453 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 SRSF7Q16629 238 aaKnown RBP eCLIP1.75□□□□□ -2.13
RTF1-207ENST00000561076 POU2AF1Q16633 256 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 KCTD19Q17RG1 926 aaPredicted RBP1.75□□□□□ -2.13
RTF1-207ENST00000561076 ISXQ2M1V0 245 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 TRMT5Q32P41 509 aaKnown RBP1.75□□□□□ -2.13
RTF1-207ENST00000561076 Q4G0T1 1027 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 DNAL1Q4LDG9 190 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 PDZD11Q5EBL8 140 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 TMEM31Q5JXX7 168 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 MUC21Q5SSG8 566 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 CEP85LQ5SZL2 805 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 C1orf220Q5T0J3 134 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 MARCH8Q5T0T0 291 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 C10orf25Q5T742 122 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 ZNF658Q5TYW1 1059 aaPredicted RBP1.75□□□□□ -2.13
RTF1-207ENST00000561076 UBE2UQ5VVX9 321 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 MFSD14CQ5VZR4 134 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 LPCAT4Q643R3 524 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 ANKRD26P1Q6NSI1 321 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 CLEC18BQ6UXF7 455 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 TFAP2EQ6VUC0 442 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 ABHD13Q7L211 337 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 ZNF571Q7Z3V5 609 aaPredicted RBP1.75□□□□□ -2.13
RTF1-207ENST00000561076 NUFIP2Q7Z417 695 aaKnown RBP1.75□□□□□ -2.13
RTF1-207ENST00000561076 SLC47A2Q86VL8 602 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 HOGA1Q86XE5 327 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 ITPRIPQ8IWB1 547 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 PRR22Q8IZ63 422 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms