RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 CHST11Q9NPF2 352 aa15.43■□□□□ 0.06
HDDC3-206ENST00000561036 ZNF346Q9UL40 294 aaKnown RBP15.43■□□□□ 0.06
HDDC3-206ENST00000561036 TRAPPC4Q9Y296 219 aa15.43■□□□□ 0.06
HDDC3-206ENST00000561036 PCDHGB7Q9Y5F8 929 aa15.43■□□□□ 0.06
HDDC3-206ENST00000561036 MPDZO75970 2070 aa15.43■□□□□ 0.06
HDDC3-206ENST00000561036 WDR87Q6ZQQ6 2873 aa15.42■□□□□ 0.06
HDDC3-206ENST00000561036 A0A1W2PRG6 482 aa15.42■□□□□ 0.06
HDDC3-206ENST00000561036 AIREO43918 545 aa15.42■□□□□ 0.06
HDDC3-206ENST00000561036 ZIC3O60481 467 aa15.42■□□□□ 0.06
HDDC3-206ENST00000561036 GLCEO94923 617 aa15.42■□□□□ 0.06
HDDC3-206ENST00000561036 CLUP10909 449 aa15.42■□□□□ 0.06
HDDC3-206ENST00000561036 IMPDH2P12268 514 aa15.42■□□□□ 0.06
HDDC3-206ENST00000561036 CPEP16870 476 aa15.42■□□□□ 0.06
HDDC3-206ENST00000561036 CNR1P21554 472 aa15.42■□□□□ 0.06
HDDC3-206ENST00000561036 ITGA3P26006 1051 aa15.42■□□□□ 0.06
HDDC3-206ENST00000561036 SRD5A2P31213 254 aa15.42■□□□□ 0.06
HDDC3-206ENST00000561036 SOX8P57073 446 aa15.42■□□□□ 0.06
HDDC3-206ENST00000561036 PUDPQ08623 228 aa15.42■□□□□ 0.06
HDDC3-206ENST00000561036 MYBPHQ13203 477 aa15.42■□□□□ 0.06
HDDC3-206ENST00000561036 RTP5Q14D33 572 aa15.42■□□□□ 0.06
HDDC3-206ENST00000561036 OR7A5Q15622 319 aa15.42■□□□□ 0.06
HDDC3-206ENST00000561036 FAM205BPQ63HN1 556 aa15.42■□□□□ 0.06
HDDC3-206ENST00000561036 PAQR6Q6TCH4 344 aa15.42■□□□□ 0.06
HDDC3-206ENST00000561036 SHFQ7M4L6 423 aa15.42■□□□□ 0.06
HDDC3-206ENST00000561036 ZNF227Q86WZ6 799 aa15.42■□□□□ 0.06
HDDC3-206ENST00000561036 OR2T4Q8NH00 348 aa15.42■□□□□ 0.06
HDDC3-206ENST00000561036 ZNF519Q8TB69 540 aa15.42■□□□□ 0.06
HDDC3-206ENST00000561036 NXPE2Q96DL1 559 aa15.42■□□□□ 0.06
HDDC3-206ENST00000561036 MYCBPQ99417 103 aaPredicted RBP15.42■□□□□ 0.06
HDDC3-206ENST00000561036 UTP23Q9BRU9 249 aaKnown RBP15.42■□□□□ 0.06
HDDC3-206ENST00000561036 DLL3Q9NYJ7 618 aa15.42■□□□□ 0.06
HDDC3-206ENST00000561036 DKKL1Q9UK85 242 aa15.42■□□□□ 0.06
HDDC3-206ENST00000561036 NOX1Q9Y5S8 564 aa15.42■□□□□ 0.06
HDDC3-206ENST00000561036 A0A1W2PNV4 684 aa15.41■□□□□ 0.06
HDDC3-206ENST00000561036 A0A1W2PPW3 197 aa15.41■□□□□ 0.06
HDDC3-206ENST00000561036 DAPL1A0PJW8 107 aa15.41■□□□□ 0.06
HDDC3-206ENST00000561036 A6NIZ1 184 aa15.41■□□□□ 0.06
HDDC3-206ENST00000561036 C12orf71A8MTZ7 269 aa15.41■□□□□ 0.06
HDDC3-206ENST00000561036 SHISA8B8ZZ34 492 aa15.41■□□□□ 0.06
HDDC3-206ENST00000561036 MS4A18H0YCH9 400 aa15.41■□□□□ 0.06
HDDC3-206ENST00000561036 XKRYO14609 159 aa15.41■□□□□ 0.06
HDDC3-206ENST00000561036 SEC14L5O43304 696 aa15.41■□□□□ 0.06
HDDC3-206ENST00000561036 BCL10O95999 233 aa15.41■□□□□ 0.06
HDDC3-206ENST00000561036 IL11P20809 199 aa15.41■□□□□ 0.06
HDDC3-206ENST00000561036 GADD45AP24522 165 aa15.41■□□□□ 0.06
HDDC3-206ENST00000561036 CD96P40200 585 aa15.41■□□□□ 0.06
HDDC3-206ENST00000561036 CENPAP49450 140 aa15.41■□□□□ 0.06
HDDC3-206ENST00000561036 DAP3P51398 398 aaKnown RBP15.41■□□□□ 0.06
HDDC3-206ENST00000561036 RAP1BP61224 184 aa15.41■□□□□ 0.06
HDDC3-206ENST00000561036 RAP1AP62834 184 aa15.41■□□□□ 0.06
HDDC3-206ENST00000561036 BDH1Q02338 343 aa15.41■□□□□ 0.06
HDDC3-206ENST00000561036 OC90Q02509 493 aaPredicted RBP15.41■□□□□ 0.06
HDDC3-206ENST00000561036 AQP6Q13520 282 aa15.41■□□□□ 0.06
HDDC3-206ENST00000561036 TPBGQ13641 420 aa15.41■□□□□ 0.06
HDDC3-206ENST00000561036 GALEQ14376 348 aa15.41■□□□□ 0.06
HDDC3-206ENST00000561036 ACKR1Q16570 336 aa15.41■□□□□ 0.06
HDDC3-206ENST00000561036 ZNF239Q16600 458 aaKnown RBP15.41■□□□□ 0.06
HDDC3-206ENST00000561036 MS4A18Q3C1V0 323 aa15.41■□□□□ 0.06
HDDC3-206ENST00000561036 MESTQ5EB52 335 aa15.41■□□□□ 0.06
HDDC3-206ENST00000561036 GDPGP1Q6ZNW5 385 aa15.41■□□□□ 0.06
HDDC3-206ENST00000561036 LHFPL3Q86UP9 236 aa15.41■□□□□ 0.06
HDDC3-206ENST00000561036 ATCAYQ86WG3 371 aa15.41■□□□□ 0.06
HDDC3-206ENST00000561036 ATP6V1C2Q8NEY4 427 aa15.41■□□□□ 0.06
HDDC3-206ENST00000561036 SMPDL3BQ92485 455 aa15.41■□□□□ 0.06
HDDC3-206ENST00000561036 MRPL48Q96GC5 212 aaKnown RBP15.41■□□□□ 0.06
HDDC3-206ENST00000561036 GNRHR2Q96P88 292 aa15.41■□□□□ 0.06
HDDC3-206ENST00000561036 CNN2Q99439 309 aaKnown RBP15.41■□□□□ 0.06
HDDC3-206ENST00000561036 ARHGAP9Q9BRR9 750 aa15.41■□□□□ 0.06
HDDC3-206ENST00000561036 ASB6Q9NWX5 421 aa15.41■□□□□ 0.06
HDDC3-206ENST00000561036 LRFN1Q9P244 771 aa15.41■□□□□ 0.06
HDDC3-206ENST00000561036 SEC14L4Q9UDX3 406 aa15.41■□□□□ 0.06
HDDC3-206ENST00000561036 CPAMD8Q8IZJ3 1885 aa15.41■□□□□ 0.06
HDDC3-206ENST00000561036 PTPRBP23467 1997 aa15.4■□□□□ 0.06
HDDC3-206ENST00000561036 C11orf98E9PRG8 122 aa15.4■□□□□ 0.06
HDDC3-206ENST00000561036 H3BML4 177 aa15.4■□□□□ 0.06
HDDC3-206ENST00000561036 AKAP8O43823 692 aaKnown RBP15.4■□□□□ 0.06
HDDC3-206ENST00000561036 AHCYL1O43865 530 aa15.4■□□□□ 0.06
HDDC3-206ENST00000561036 GYPBP06028 91 aa15.4■□□□□ 0.06
HDDC3-206ENST00000561036 OR2T7P0C7T2 308 aa15.4■□□□□ 0.06
HDDC3-206ENST00000561036 AHCYP23526 432 aa15.4■□□□□ 0.06
HDDC3-206ENST00000561036 UGT2B10P36537 528 aa15.4■□□□□ 0.06
HDDC3-206ENST00000561036 DNASE1L1P49184 302 aa15.4■□□□□ 0.06
HDDC3-206ENST00000561036 SLC35A1P78382 337 aa15.4■□□□□ 0.06
HDDC3-206ENST00000561036 HSF2Q03933 536 aa15.4■□□□□ 0.06
HDDC3-206ENST00000561036 TLE3Q04726 772 aa15.4■□□□□ 0.06
HDDC3-206ENST00000561036 SPCS2Q15005 226 aa15.4■□□□□ 0.06
HDDC3-206ENST00000561036 SSX1Q16384 188 aa15.4■□□□□ 0.06
HDDC3-206ENST00000561036 TUBA3EQ6PEY2 450 aa15.4■□□□□ 0.06
HDDC3-206ENST00000561036 ZNF322Q6U7Q0 402 aaPredicted RBP15.4■□□□□ 0.06
HDDC3-206ENST00000561036 PXKQ7Z7A4 578 aa15.4■□□□□ 0.06
HDDC3-206ENST00000561036 EGFL6Q8IUX8 553 aa15.4■□□□□ 0.06
HDDC3-206ENST00000561036 TMEM99Q8N816 258 aa15.4■□□□□ 0.06
HDDC3-206ENST00000561036 OR10H4Q8NGA5 316 aa15.4■□□□□ 0.06
HDDC3-206ENST00000561036 OR2T27Q8NH04 317 aa15.4■□□□□ 0.06
HDDC3-206ENST00000561036 JSRP1Q96MG2 331 aaPredicted RBP15.4■□□□□ 0.06
HDDC3-206ENST00000561036 PIGQQ9BRB3 760 aa15.4■□□□□ 0.06
HDDC3-206ENST00000561036 NDUFB11Q9NX14 153 aa15.4■□□□□ 0.06
HDDC3-206ENST00000561036 ANKRD10Q9NXR5 420 aa15.4■□□□□ 0.06
HDDC3-206ENST00000561036 VSX1Q9NZR4 365 aaPredicted RBP15.4■□□□□ 0.06
HDDC3-206ENST00000561036 EP300Q09472 2414 aaPredicted RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms