RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 UPK3AO75631 287 aa8.07□□□□□ -1.12
HERC1-210ENST00000560897 RSL1D1O76021 490 aaKnown RBP8.07□□□□□ -1.12
HERC1-210ENST00000560897 RAB36O95755 333 aa8.07□□□□□ -1.12
HERC1-210ENST00000560897 HMGN2P05204 90 aaKnown RBP8.07□□□□□ -1.12
HERC1-210ENST00000560897 GPIP06744 558 aa8.07□□□□□ -1.12
HERC1-210ENST00000560897 CD79AP11912 226 aa8.07□□□□□ -1.12
HERC1-210ENST00000560897 RYKP34925 604 aa8.07□□□□□ -1.12
HERC1-210ENST00000560897 HTR3AP46098 478 aa8.07□□□□□ -1.12
HERC1-210ENST00000560897 CCT5P48643 541 aa8.07□□□□□ -1.12
HERC1-210ENST00000560897 SERPINB8P50452 374 aa8.07□□□□□ -1.12
HERC1-210ENST00000560897 KLF3P57682 345 aaPredicted RBP8.07□□□□□ -1.12
HERC1-210ENST00000560897 ARF1P84077 181 aaKnown RBP8.07□□□□□ -1.12
HERC1-210ENST00000560897 TSTQ16762 297 aaKnown RBP8.07□□□□□ -1.12
HERC1-210ENST00000560897 GSG1Q2KHT4 349 aa8.07□□□□□ -1.12
HERC1-210ENST00000560897 NRN1LQ496H8 165 aa8.07□□□□□ -1.12
HERC1-210ENST00000560897 ATP6AP1LQ52LC2 224 aa8.07□□□□□ -1.12
HERC1-210ENST00000560897 HSP90B2PQ58FF3 399 aa8.07□□□□□ -1.12
HERC1-210ENST00000560897 OXLD1Q5BKU9 147 aa8.07□□□□□ -1.12
HERC1-210ENST00000560897 Q6ZTK2 550 aa8.07□□□□□ -1.12
HERC1-210ENST00000560897 EIF3MQ7L2H7 374 aaKnown RBP8.07□□□□□ -1.12
HERC1-210ENST00000560897 KLHL36Q8N4N3 616 aa8.07□□□□□ -1.12
HERC1-210ENST00000560897 MREGQ8N565 214 aa8.07□□□□□ -1.12
HERC1-210ENST00000560897 CPEB3Q8NE35 698 aaKnown RBP8.07□□□□□ -1.12
HERC1-210ENST00000560897 ZNF483Q8TF39 744 aaPredicted RBP8.07□□□□□ -1.12
HERC1-210ENST00000560897 DYRK2Q92630 601 aa8.07□□□□□ -1.12
HERC1-210ENST00000560897 CIDECQ96AQ7 238 aaPredicted RBP8.07□□□□□ -1.12
HERC1-210ENST00000560897 FAM71F1Q96KD3 344 aaPredicted RBP8.07□□□□□ -1.12
HERC1-210ENST00000560897 ACTRT3Q9BYD9 372 aa8.07□□□□□ -1.12
HERC1-210ENST00000560897 SIRT3Q9NTG7 399 aaPredicted RBP8.07□□□□□ -1.12
HERC1-210ENST00000560897 SIRT5Q9NXA8 310 aa8.07□□□□□ -1.12
HERC1-210ENST00000560897 NKIRAS2Q9NYR9 191 aa8.07□□□□□ -1.12
HERC1-210ENST00000560897 SLC7A8Q9UHI5 535 aa8.07□□□□□ -1.12
HERC1-210ENST00000560897 ZNF180Q9UJW8 692 aa8.07□□□□□ -1.12
HERC1-210ENST00000560897 TRAPPC2LH3BP13 241 aa8.06□□□□□ -1.12
HERC1-210ENST00000560897 ZNF208O43345 1280 aa8.06□□□□□ -1.12
HERC1-210ENST00000560897 DNAJA2O60884 412 aa8.06□□□□□ -1.12
HERC1-210ENST00000560897 AKR7A3O95154 331 aa8.06□□□□□ -1.12
HERC1-210ENST00000560897 TGDSO95455 350 aa8.06□□□□□ -1.12
HERC1-210ENST00000560897 PLATP00750 562 aa8.06□□□□□ -1.12
HERC1-210ENST00000560897 SFTPBP07988 381 aa8.06□□□□□ -1.12
HERC1-210ENST00000560897 PPIAL4GP0DN37 164 aa8.06□□□□□ -1.12
HERC1-210ENST00000560897 IMPDH2P12268 514 aa8.06□□□□□ -1.12
HERC1-210ENST00000560897 DRD4P21917 467 aa8.06□□□□□ -1.12
HERC1-210ENST00000560897 FUT4P22083 530 aa8.06□□□□□ -1.12
HERC1-210ENST00000560897 CLCQ05315 142 aa8.06□□□□□ -1.12
HERC1-210ENST00000560897 BST1Q10588 318 aa8.06□□□□□ -1.12
HERC1-210ENST00000560897 LARS2Q15031 903 aaKnown RBP8.06□□□□□ -1.12
HERC1-210ENST00000560897 OR7A5Q15622 319 aa8.06□□□□□ -1.12
HERC1-210ENST00000560897 GPR68Q15743 365 aa8.06□□□□□ -1.12
HERC1-210ENST00000560897 MOGQ16653 247 aa8.06□□□□□ -1.12
HERC1-210ENST00000560897 ESCO2Q56NI9 601 aa8.06□□□□□ -1.12
HERC1-210ENST00000560897 DEFB121Q5J5C9 76 aa8.06□□□□□ -1.12
HERC1-210ENST00000560897 FAM209AQ5JX71 171 aa8.06□□□□□ -1.12
HERC1-210ENST00000560897 BEND6Q5SZJ8 279 aaPredicted RBP8.06□□□□□ -1.12
HERC1-210ENST00000560897 GPR157Q5UAW9 335 aa8.06□□□□□ -1.12
HERC1-210ENST00000560897 PRAMEF8Q5VWM4 474 aa8.06□□□□□ -1.12
HERC1-210ENST00000560897 PRAMEF7Q5VXH5 474 aa8.06□□□□□ -1.12
HERC1-210ENST00000560897 FAM219BQ5XKK7 198 aa8.06□□□□□ -1.12
HERC1-210ENST00000560897 ANKRD26P1Q6NSI1 321 aa8.06□□□□□ -1.12
HERC1-210ENST00000560897 NOXRED1Q6NXP6 359 aa8.06□□□□□ -1.12
HERC1-210ENST00000560897 LRRN1Q6UXK5 716 aa8.06□□□□□ -1.12
HERC1-210ENST00000560897 Q6YL49 198 aa8.06□□□□□ -1.12
HERC1-210ENST00000560897 GPRIN3Q6ZVF9 776 aa8.06□□□□□ -1.12
HERC1-210ENST00000560897 GPR137CQ8N3F9 429 aa8.06□□□□□ -1.12
HERC1-210ENST00000560897 TMEM99Q8N816 258 aa8.06□□□□□ -1.12
HERC1-210ENST00000560897 ZIC4Q8N9L1 334 aa8.06□□□□□ -1.12
HERC1-210ENST00000560897 CCDC63Q8NA47 563 aa8.06□□□□□ -1.12
HERC1-210ENST00000560897 ANKK1Q8NFD2 765 aa8.06□□□□□ -1.12
HERC1-210ENST00000560897 OR10S1Q8NGN2 331 aa8.06□□□□□ -1.12
HERC1-210ENST00000560897 TBC1D15Q8TC07 691 aa8.06□□□□□ -1.12
HERC1-210ENST00000560897 SSMEM1Q8WWF3 244 aa8.06□□□□□ -1.12
HERC1-210ENST00000560897 PPCDCQ96CD2 204 aa8.06□□□□□ -1.12
HERC1-210ENST00000560897 TAPBPLQ9BX59 468 aa8.06□□□□□ -1.12
HERC1-210ENST00000560897 FUT8Q9BYC5 575 aa8.06□□□□□ -1.12
HERC1-210ENST00000560897 LINC00470Q9BZP3 86 aa8.06□□□□□ -1.12
HERC1-210ENST00000560897 SH3BP4Q9P0V3 963 aa8.06□□□□□ -1.12
HERC1-210ENST00000560897 IL20RAQ9UHF4 553 aa8.06□□□□□ -1.12
HERC1-210ENST00000560897 POLR3KQ9Y2Y1 108 aaPredicted RBP8.06□□□□□ -1.12
HERC1-210ENST00000560897 CACNG2Q9Y698 323 aa8.06□□□□□ -1.12
HERC1-210ENST00000560897 TMED7-TICAM2A0A0A6YYA0 188 aa8.05□□□□□ -1.12
HERC1-210ENST00000560897 AQP7P3A6NL99 342 aa8.05□□□□□ -1.12
HERC1-210ENST00000560897 NPIPB9F8W1W9 429 aa8.05□□□□□ -1.12
HERC1-210ENST00000560897 C3orf84H3BNL1 204 aa8.05□□□□□ -1.12
HERC1-210ENST00000560897 DYNC1I1O14576 645 aa8.05□□□□□ -1.12
HERC1-210ENST00000560897 SCN2BO60939 215 aa8.05□□□□□ -1.12
HERC1-210ENST00000560897 VAMP5O95183 116 aa8.05□□□□□ -1.12
HERC1-210ENST00000560897 NEFHP12036 1026 aa8.05□□□□□ -1.12
HERC1-210ENST00000560897 ZNF35P13682 527 aa8.05□□□□□ -1.12
HERC1-210ENST00000560897 PTDSS1P48651 473 aaKnown RBP8.05□□□□□ -1.12
HERC1-210ENST00000560897 HTR6P50406 440 aa8.05□□□□□ -1.12
HERC1-210ENST00000560897 POLR2HP52434 150 aaKnown RBP8.05□□□□□ -1.12
HERC1-210ENST00000560897 PAX8Q06710 450 aa8.05□□□□□ -1.12
HERC1-210ENST00000560897 LCP2Q13094 533 aa8.05□□□□□ -1.12
HERC1-210ENST00000560897 TP53BP2Q13625 1128 aa8.05□□□□□ -1.12
HERC1-210ENST00000560897 CASP8Q14790 479 aa8.05□□□□□ -1.12
HERC1-210ENST00000560897 FXNQ16595 210 aa8.05□□□□□ -1.12
HERC1-210ENST00000560897 SPDYE7PQ495Y7 208 aa8.05□□□□□ -1.12
HERC1-210ENST00000560897 TTMPQ5BVD1 217 aa8.05□□□□□ -1.12
HERC1-210ENST00000560897 BRD3OSQ6XYD6 125 aa8.05□□□□□ -1.12
HERC1-210ENST00000560897 LINGO2Q7L985 606 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms