RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 ZYG11AQ6WRX3 759 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 C17orf107Q6ZR85 190 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 RNF165Q6ZSG1 346 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 FRMD7Q6ZUT3 714 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 MDP1Q86V88 176 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 KRTAP19-1Q8IUB9 90 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 EPHX4Q8IUS5 362 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 CMIPQ8IY22 773 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 GPR137CQ8N3F9 429 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 OR5AK3PQ8NH89 298 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 ST7LQ8TDW4 575 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 ACMSDQ8TDX5 336 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 TMIGD2Q96BF3 282 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 COQ8BQ96D53 544 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 ZG16BQ96DA0 208 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 SLC35G5Q96KT7 338 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 PPP3R2Q96LZ3 170 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 DUX5Q96PT3 197 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 ALKBH3Q96Q83 286 aaPredicted RBP4.43□□□□□ -1.7
SPG11-208ENST00000558155 CCT8L2Q96SF2 557 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 PKP2Q99959 881 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 SYT3Q9BQG1 590 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 DUSP26Q9BV47 211 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 C1QTNF5Q9BXJ0 243 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 MMP27Q9H306 513 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 NELFAQ9H3P2 528 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 DENND2DQ9H6A0 471 aaPredicted RBP4.43□□□□□ -1.7
SPG11-208ENST00000558155 BEX1Q9HBH7 125 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 GPR35Q9HC97 309 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 HINT3Q9NQE9 182 aaKnown RBP4.43□□□□□ -1.7
SPG11-208ENST00000558155 ZDHHC18Q9NUE0 388 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 DECR2Q9NUI1 292 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 ADPRHL2Q9NX46 363 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 PLEK2Q9NYT0 353 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 OPN4Q9UHM6 478 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 FIS1Q9Y3D6 152 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 MMP24Q9Y5R2 645 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 TENM1Q9UKZ4 2725 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 CENPVL1A0A0U1RR11 272 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 EXOC1LA0A1B0GW35 172 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 SLC22A23A1A5C7 686 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 CFAP73A6NFT4 308 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 DNAJC9-AS1A6NH13 148 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 C17orf100A8MU93 164 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 ZNF99A8MXY4 864 aaPredicted RBP4.42□□□□□ -1.7
SPG11-208ENST00000558155 CLDN25C9JDP6 229 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 G3V2L1 256 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 AP3D1O14617 1153 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 AKAP8O43823 692 aaKnown RBP4.42□□□□□ -1.7
SPG11-208ENST00000558155 ZNF500O60304 480 aaPredicted RBP4.42□□□□□ -1.7
SPG11-208ENST00000558155 BCAS1O75363 584 aaPredicted RBP4.42□□□□□ -1.7
SPG11-208ENST00000558155 DEAF1O75398 565 aaPredicted RBP4.42□□□□□ -1.7
SPG11-208ENST00000558155 FOXH1O75593 365 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 KNG1P01042 644 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 FSHBP01225 129 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 IGHV2-5P01817 119 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 CRYBA1P05813 215 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 CHRM4P08173 479 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 TFPTP0C1Z6 253 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 CD79AP11912 226 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 IL7RP16871 459 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 PCGF2P35227 344 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 MAGEB1P43366 347 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 CCT5P48643 541 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 COPZ1P61923 177 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 HPCAP84074 193 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 PIGFQ07326 219 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 SLC3A1Q07837 685 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 C1DQ13901 141 aaKnown RBP4.42□□□□□ -1.7
SPG11-208ENST00000558155 MAD2L1BPQ15013 274 aaPredicted RBP4.42□□□□□ -1.7
SPG11-208ENST00000558155 NKPD1Q17RQ9 610 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 MSMPQ1L6U9 139 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 GSG1Q2KHT4 349 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 CEACAM16Q2WEN9 425 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 HFEQ30201 348 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 PGS1Q32NB8 556 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 CCDC153Q494R4 210 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 ARMCX4Q5H9R4 360 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 FAM209AQ5JX71 171 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 RGS7BPQ6MZT1 257 aaPredicted RBP4.42□□□□□ -1.7
SPG11-208ENST00000558155 LEG1Q6P5S2 330 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 LINGO2Q7L985 606 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 OLIG3Q7RTU3 272 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 MYPOPQ86VE0 399 aaPredicted RBP4.42□□□□□ -1.7
SPG11-208ENST00000558155 LRP11Q86VZ4 500 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 SNX32Q86XE0 403 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 DDIASQ8IXT1 998 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 ZNF440Q8IYI8 595 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 CCDC63Q8NA47 563 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 GLB1L3Q8NCI6 653 aaPredicted RBP4.42□□□□□ -1.7
SPG11-208ENST00000558155 PIK3C3Q8NEB9 887 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 VPS37AQ8NEZ2 397 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 OR2T11Q8NH01 316 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 MIPOL1Q8TD10 442 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 SNX33Q8WV41 574 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 CNOT9Q92600 299 aaKnown RBP4.42□□□□□ -1.7
SPG11-208ENST00000558155 UBE2FQ969M7 185 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 ROPN1LQ96C74 230 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 OXGR1Q96P68 337 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 DPY30Q9C005 99 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms