RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 C11orf98E9PRG8 122 aa22.62■■□□□ 1.21
SMAD6-202ENST00000557916 KRT36O76013 467 aa22.62■■□□□ 1.21
SMAD6-202ENST00000557916 SAGP10523 405 aaPredicted RBP22.62■■□□□ 1.21
SMAD6-202ENST00000557916 HLA-DOBP13765 273 aa22.62■■□□□ 1.21
SMAD6-202ENST00000557916 POU2F1P14859 743 aa22.62■■□□□ 1.21
SMAD6-202ENST00000557916 MAKP20794 623 aa22.62■■□□□ 1.21
SMAD6-202ENST00000557916 POU3F1Q03052 451 aaPredicted RBP22.62■■□□□ 1.21
SMAD6-202ENST00000557916 FAM27E3Q08E93 113 aa22.62■■□□□ 1.21
SMAD6-202ENST00000557916 ZP4Q12836 540 aa22.62■■□□□ 1.21
SMAD6-202ENST00000557916 PXKQ7Z7A4 578 aa22.62■■□□□ 1.21
SMAD6-202ENST00000557916 OR4K5Q8NGD3 323 aa22.62■■□□□ 1.21
SMAD6-202ENST00000557916 ALPK1Q96QP1 1244 aa22.62■■□□□ 1.21
SMAD6-202ENST00000557916 ENKD1Q9H0I2 346 aa22.62■■□□□ 1.21
SMAD6-202ENST00000557916 FANCFQ9NPI8 374 aa22.62■■□□□ 1.21
SMAD6-202ENST00000557916 TMCC3Q9ULS5 477 aa22.62■■□□□ 1.21
SMAD6-202ENST00000557916 TMEM5Q9Y2B1 443 aa22.62■■□□□ 1.21
SMAD6-202ENST00000557916 SH3PXD2BA1X283 911 aa22.61■■□□□ 1.21
SMAD6-202ENST00000557916 EFCAB9A8MZ26 197 aa22.61■■□□□ 1.21
SMAD6-202ENST00000557916 RNF13O43567 381 aa22.61■■□□□ 1.21
SMAD6-202ENST00000557916 CLDN17P56750 224 aa22.61■■□□□ 1.21
SMAD6-202ENST00000557916 TMPRSS11FQ6ZWK6 438 aa22.61■■□□□ 1.21
SMAD6-202ENST00000557916 RSRC1Q96IZ7 334 aaKnown RBP22.61■■□□□ 1.21
SMAD6-202ENST00000557916 TNFRSF11BO00300 401 aa22.6■■□□□ 1.21
SMAD6-202ENST00000557916 TRAF3IP2O43734 574 aaPredicted RBP22.6■■□□□ 1.21
SMAD6-202ENST00000557916 SERPINI2O75830 405 aa22.6■■□□□ 1.21
SMAD6-202ENST00000557916 IGHV3-9P01782 118 aa22.6■■□□□ 1.21
SMAD6-202ENST00000557916 IGFBP2P18065 325 aa22.6■■□□□ 1.21
SMAD6-202ENST00000557916 GPR4P46093 362 aa22.6■■□□□ 1.21
SMAD6-202ENST00000557916 PCYT1AP49585 367 aa22.6■■□□□ 1.21
SMAD6-202ENST00000557916 GABPB1Q06547 395 aaPredicted RBP22.6■■□□□ 1.21
SMAD6-202ENST00000557916 SNTB1Q13884 538 aaKnown RBP22.6■■□□□ 1.21
SMAD6-202ENST00000557916 FBXW9Q5XUX1 488 aa22.6■■□□□ 1.21
SMAD6-202ENST00000557916 OR2T5Q6IEZ7 315 aa22.6■■□□□ 1.21
SMAD6-202ENST00000557916 NIPAL3Q6P499 406 aa22.6■■□□□ 1.21
SMAD6-202ENST00000557916 MEX3BQ6ZN04 569 aaKnown RBP22.6■■□□□ 1.21
SMAD6-202ENST00000557916 Q6ZT83 130 aa22.6■■□□□ 1.21
SMAD6-202ENST00000557916 YTHDF3Q7Z739 585 aaKnown RBP22.6■■□□□ 1.21
SMAD6-202ENST00000557916 GABRG1Q8N1C3 465 aa22.6■■□□□ 1.21
SMAD6-202ENST00000557916 UBE2J2Q8N2K1 259 aa22.6■■□□□ 1.21
SMAD6-202ENST00000557916 ACBD4Q8NC06 268 aa22.6■■□□□ 1.21
SMAD6-202ENST00000557916 OR2T29Q8NH02 315 aa22.6■■□□□ 1.21
SMAD6-202ENST00000557916 FAM46AQ96IP4 442 aaKnown RBP22.6■■□□□ 1.21
SMAD6-202ENST00000557916 KRCC1Q9NPI7 259 aaPredicted RBP22.6■■□□□ 1.21
SMAD6-202ENST00000557916 LYVE1Q9Y5Y7 322 aa22.6■■□□□ 1.21
SMAD6-202ENST00000557916 CNOT4O95628 575 aaKnown RBP22.59■■□□□ 1.21
SMAD6-202ENST00000557916 SELENOPP49908 381 aa22.59■■□□□ 1.21
SMAD6-202ENST00000557916 HMGA2P52926 109 aa22.59■■□□□ 1.21
SMAD6-202ENST00000557916 SORDQ00796 357 aa22.59■■□□□ 1.21
SMAD6-202ENST00000557916 RPL18Q07020 188 aaKnown RBP22.59■■□□□ 1.21
SMAD6-202ENST00000557916 HIST2H2BCQ6DN03 193 aa22.59■■□□□ 1.21
SMAD6-202ENST00000557916 DMRTC2Q8IXT2 367 aaPredicted RBP22.59■■□□□ 1.21
SMAD6-202ENST00000557916 ANKK1Q8NFD2 765 aa22.59■■□□□ 1.21
SMAD6-202ENST00000557916 SPOCK3Q9BQ16 436 aa22.59■■□□□ 1.21
SMAD6-202ENST00000557916 YY1AP1Q9H869 796 aa22.59■■□□□ 1.21
SMAD6-202ENST00000557916 CCM2LQ9NUG4 571 aaPredicted RBP22.59■■□□□ 1.21
SMAD6-202ENST00000557916 RCE1Q9Y256 329 aa22.59■■□□□ 1.21
SMAD6-202ENST00000557916 AKAP8O43823 692 aaKnown RBP22.58■■□□□ 1.21
SMAD6-202ENST00000557916 ADAP00813 363 aa22.58■■□□□ 1.21
SMAD6-202ENST00000557916 CST1P01037 141 aa22.58■■□□□ 1.21
SMAD6-202ENST00000557916 TSPAN19P0C672 248 aa22.58■■□□□ 1.21
SMAD6-202ENST00000557916 PEX19P40855 299 aa22.58■■□□□ 1.21
SMAD6-202ENST00000557916 AQP2P41181 271 aa22.58■■□□□ 1.21
SMAD6-202ENST00000557916 LIMS1P48059 325 aa22.58■■□□□ 1.21
SMAD6-202ENST00000557916 SLC9A3P48764 834 aa22.58■■□□□ 1.21
SMAD6-202ENST00000557916 TSPO2Q5TGU0 170 aa22.58■■□□□ 1.21
SMAD6-202ENST00000557916 NHLRC1Q6VVB1 395 aa22.58■■□□□ 1.21
SMAD6-202ENST00000557916 OAFQ86UD1 273 aa22.58■■□□□ 1.21
SMAD6-202ENST00000557916 SLCO4A1Q96BD0 722 aa22.58■■□□□ 1.21
SMAD6-202ENST00000557916 TXNDC15Q96J42 360 aa22.58■■□□□ 1.21
SMAD6-202ENST00000557916 REEP1Q9H902 201 aa22.58■■□□□ 1.21
SMAD6-202ENST00000557916 MED29Q9NX70 200 aa22.58■■□□□ 1.21
SMAD6-202ENST00000557916 UPB1Q9UBR1 384 aa22.58■■□□□ 1.21
SMAD6-202ENST00000557916 FREM1Q5H8C1 2179 aa22.57■■□□□ 1.2
SMAD6-202ENST00000557916 C16orf97H3BN30 126 aa22.57■■□□□ 1.2
SMAD6-202ENST00000557916 CDC42EP2O14613 210 aa22.57■■□□□ 1.2
SMAD6-202ENST00000557916 OR10H3O60404 316 aa22.57■■□□□ 1.2
SMAD6-202ENST00000557916 FKBP6O75344 327 aa22.57■■□□□ 1.2
SMAD6-202ENST00000557916 UGT2B10P36537 528 aa22.57■■□□□ 1.2
SMAD6-202ENST00000557916 OMPP47874 163 aa22.57■■□□□ 1.2
SMAD6-202ENST00000557916 PPP1R8Q12972 351 aaKnown RBP22.57■■□□□ 1.2
SMAD6-202ENST00000557916 CCNIQ14094 377 aa22.57■■□□□ 1.2
SMAD6-202ENST00000557916 LAPTM4AQ15012 233 aa22.57■■□□□ 1.2
SMAD6-202ENST00000557916 P2RY6Q15077 328 aa22.57■■□□□ 1.2
SMAD6-202ENST00000557916 STAC2Q6ZMT1 411 aa22.57■■□□□ 1.2
SMAD6-202ENST00000557916 CXorf67Q86X51 503 aaPredicted RBP22.57■■□□□ 1.2
SMAD6-202ENST00000557916 PAPD5Q8NDF8 572 aaKnown RBP22.57■■□□□ 1.2
SMAD6-202ENST00000557916 OR13C2Q8NGS9 318 aa22.57■■□□□ 1.2
SMAD6-202ENST00000557916 OR51A7Q8NH64 312 aa22.57■■□□□ 1.2
SMAD6-202ENST00000557916 MOSPD2Q8NHP6 518 aa22.57■■□□□ 1.2
SMAD6-202ENST00000557916 TNFRSF13CQ96RJ3 184 aa22.57■■□□□ 1.2
SMAD6-202ENST00000557916 SLCO5A1Q9H2Y9 848 aa22.57■■□□□ 1.2
SMAD6-202ENST00000557916 SLC7A10Q9NS82 523 aa22.57■■□□□ 1.2
SMAD6-202ENST00000557916 HIF3AQ9Y2N7 669 aa22.57■■□□□ 1.2
SMAD6-202ENST00000557916 TRAV27A0A087WT01 109 aa22.57■■□□□ 1.2
SMAD6-202ENST00000557916 ZNF432O94892 652 aa22.57■■□□□ 1.2
SMAD6-202ENST00000557916 F13BP05160 661 aa22.57■■□□□ 1.2
SMAD6-202ENST00000557916 COX6B1P14854 86 aa22.57■■□□□ 1.2
SMAD6-202ENST00000557916 IFNGR1P15260 489 aa22.57■■□□□ 1.2
SMAD6-202ENST00000557916 RPS4XP62701 263 aaKnown RBP22.57■■□□□ 1.2
SMAD6-202ENST00000557916 ANKDD1AQ495B1 522 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms