RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 SRSF1Q07955 248 aaKnown RBP eCLIP13.58□□□□□ -0.24
NEDD1-213ENST00000557644 GK3PQ14409 553 aa13.58□□□□□ -0.24
NEDD1-213ENST00000557644 FAM214BQ7L5A3 538 aa13.58□□□□□ -0.24
NEDD1-213ENST00000557644 NUFIP2Q7Z417 695 aaKnown RBP13.58□□□□□ -0.24
NEDD1-213ENST00000557644 IGFN1Q86VF2 1251 aa13.58□□□□□ -0.24
NEDD1-213ENST00000557644 EPHX4Q8IUS5 362 aa13.58□□□□□ -0.24
NEDD1-213ENST00000557644 LINC00471Q8N535 108 aa13.58□□□□□ -0.24
NEDD1-213ENST00000557644 ZIC4Q8N9L1 334 aa13.58□□□□□ -0.24
NEDD1-213ENST00000557644 GNPDA2Q8TDQ7 276 aa13.58□□□□□ -0.24
NEDD1-213ENST00000557644 OXGR1Q96P68 337 aa13.58□□□□□ -0.24
NEDD1-213ENST00000557644 SIGLEC7Q9Y286 467 aa13.58□□□□□ -0.24
NEDD1-213ENST00000557644 IGKV3D-15A0A087WSY6 115 aa13.58□□□□□ -0.24
NEDD1-213ENST00000557644 UNC119BA6NIH7 251 aa13.58□□□□□ -0.24
NEDD1-213ENST00000557644 YES1P07947 543 aa13.58□□□□□ -0.24
NEDD1-213ENST00000557644 BMP5P22003 454 aa13.58□□□□□ -0.24
NEDD1-213ENST00000557644 ARHGDIAP52565 204 aa13.58□□□□□ -0.24
NEDD1-213ENST00000557644 POU3F1Q03052 451 aaPredicted RBP13.58□□□□□ -0.24
NEDD1-213ENST00000557644 TSPAN31Q12999 210 aa13.58□□□□□ -0.24
NEDD1-213ENST00000557644 CDSNQ15517 529 aa13.58□□□□□ -0.24
NEDD1-213ENST00000557644 ZBED5Q49AG3 693 aa13.58□□□□□ -0.24
NEDD1-213ENST00000557644 CREB3L2Q70SY1 520 aa13.58□□□□□ -0.24
NEDD1-213ENST00000557644 WDFY1Q8IWB7 410 aa13.58□□□□□ -0.24
NEDD1-213ENST00000557644 SF3B5Q9BWJ5 86 aaKnown RBP13.58□□□□□ -0.24
NEDD1-213ENST00000557644 C12orf49Q9H741 205 aa13.58□□□□□ -0.24
NEDD1-213ENST00000557644 H0YHG0 523 aa13.57□□□□□ -0.24
NEDD1-213ENST00000557644 PTP4A3O75365 173 aa13.57□□□□□ -0.24
NEDD1-213ENST00000557644 VAMP5O95183 116 aa13.57□□□□□ -0.24
NEDD1-213ENST00000557644 ZNF43P17038 809 aa13.57□□□□□ -0.24
NEDD1-213ENST00000557644 CTSSP25774 331 aa13.57□□□□□ -0.24
NEDD1-213ENST00000557644 SLC9A3P48764 834 aa13.57□□□□□ -0.24
NEDD1-213ENST00000557644 EEF1A1P5Q5VTE0 462 aa13.57□□□□□ -0.24
NEDD1-213ENST00000557644 NHLRC1Q6VVB1 395 aa13.57□□□□□ -0.24
NEDD1-213ENST00000557644 THSD4Q6ZMP0 1018 aa13.57□□□□□ -0.24
NEDD1-213ENST00000557644 STK32CQ86UX6 486 aa13.57□□□□□ -0.24
NEDD1-213ENST00000557644 ZDHHC13Q8IUH4 622 aa13.57□□□□□ -0.24
NEDD1-213ENST00000557644 SDCCAG3Q96C92 435 aa13.57□□□□□ -0.24
NEDD1-213ENST00000557644 NRBF2Q96F24 287 aa13.57□□□□□ -0.24
NEDD1-213ENST00000557644 TXNDC15Q96J42 360 aa13.57□□□□□ -0.24
NEDD1-213ENST00000557644 GLRX2Q9NS18 164 aa13.57□□□□□ -0.24
NEDD1-213ENST00000557644 MED29Q9NX70 200 aa13.57□□□□□ -0.24
NEDD1-213ENST00000557644 MGAT4BQ9UQ53 548 aa13.57□□□□□ -0.24
NEDD1-213ENST00000557644 ARRDC5A6NEK1 342 aa13.57□□□□□ -0.24
NEDD1-213ENST00000557644 HSPB2A8KAH6 182 aa13.57□□□□□ -0.24
NEDD1-213ENST00000557644 TRAF3IP2O43734 574 aaPredicted RBP13.57□□□□□ -0.24
NEDD1-213ENST00000557644 IGFBP1P08833 259 aaPredicted RBP13.57□□□□□ -0.24
NEDD1-213ENST00000557644 RNF224P0DH78 156 aa13.57□□□□□ -0.24
NEDD1-213ENST00000557644 ZP4Q12836 540 aa13.57□□□□□ -0.24
NEDD1-213ENST00000557644 C1DQ13901 141 aaKnown RBP13.57□□□□□ -0.24
NEDD1-213ENST00000557644 PDK3Q15120 406 aa13.57□□□□□ -0.24
NEDD1-213ENST00000557644 POU4F3Q15319 338 aa13.57□□□□□ -0.24
NEDD1-213ENST00000557644 HSPB2Q16082 182 aa13.57□□□□□ -0.24
NEDD1-213ENST00000557644 ALG10Q5BKT4 473 aa13.57□□□□□ -0.24
NEDD1-213ENST00000557644 TMEM201Q5SNT2 666 aa13.57□□□□□ -0.24
NEDD1-213ENST00000557644 BTLAQ7Z6A9 289 aa13.57□□□□□ -0.24
NEDD1-213ENST00000557644 PXKQ7Z7A4 578 aa13.57□□□□□ -0.24
NEDD1-213ENST00000557644 KIF18BQ86Y91 864 aa13.57□□□□□ -0.24
NEDD1-213ENST00000557644 UEVLDQ8IX04 471 aa13.57□□□□□ -0.24
NEDD1-213ENST00000557644 ATG16L2Q8NAA4 619 aa13.57□□□□□ -0.24
NEDD1-213ENST00000557644 STARD4Q96DR4 205 aa13.57□□□□□ -0.24
NEDD1-213ENST00000557644 ZFP3Q96NJ6 502 aa13.57□□□□□ -0.24
NEDD1-213ENST00000557644 CIB1Q99828 191 aa13.57□□□□□ -0.24
NEDD1-213ENST00000557644 DGCR6LQ9BY27 220 aa13.57□□□□□ -0.24
NEDD1-213ENST00000557644 EGLN3Q9H6Z9 239 aa13.57□□□□□ -0.24
NEDD1-213ENST00000557644 SMURF2Q9HAU4 748 aa13.57□□□□□ -0.24
NEDD1-213ENST00000557644 LOC102725191A0A1B0GVB3 256 aa13.56□□□□□ -0.24
NEDD1-213ENST00000557644 ZNF724A8MTY0 619 aa13.56□□□□□ -0.24
NEDD1-213ENST00000557644 MCIDASD6RGH6 385 aa13.56□□□□□ -0.24
NEDD1-213ENST00000557644 SOX14O95416 240 aa13.56□□□□□ -0.24
NEDD1-213ENST00000557644 ANPEPP15144 967 aa13.56□□□□□ -0.24
NEDD1-213ENST00000557644 IFNGR1P15260 489 aa13.56□□□□□ -0.24
NEDD1-213ENST00000557644 DAPP51397 102 aa13.56□□□□□ -0.24
NEDD1-213ENST00000557644 HIPK1Q86Z02 1210 aa13.56□□□□□ -0.24
NEDD1-213ENST00000557644 LRRC75AQ8NAA5 344 aa13.56□□□□□ -0.24
NEDD1-213ENST00000557644 EMC6Q9BV81 110 aa13.56□□□□□ -0.24
NEDD1-213ENST00000557644 GP6Q9HCN6 339 aa13.56□□□□□ -0.24
NEDD1-213ENST00000557644 FANCFQ9NPI8 374 aa13.56□□□□□ -0.24
NEDD1-213ENST00000557644 EMC3Q9P0I2 261 aa13.56□□□□□ -0.24
NEDD1-213ENST00000557644 NOSIPQ9Y314 301 aaKnown RBP13.56□□□□□ -0.24
NEDD1-213ENST00000557644 EMC9Q9Y3B6 208 aa13.56□□□□□ -0.24
NEDD1-213ENST00000557644 FASNP49327 2511 aaKnown RBP13.56□□□□□ -0.24
NEDD1-213ENST00000557644 ADAP00813 363 aa13.56□□□□□ -0.24
NEDD1-213ENST00000557644 CLDN17P56750 224 aa13.56□□□□□ -0.24
NEDD1-213ENST00000557644 MELKQ14680 651 aa13.56□□□□□ -0.24
NEDD1-213ENST00000557644 KLHL17Q6TDP4 642 aa13.56□□□□□ -0.24
NEDD1-213ENST00000557644 ZNF620Q6ZNG0 422 aa13.56□□□□□ -0.24
NEDD1-213ENST00000557644 GALNT5Q7Z7M9 940 aa13.56□□□□□ -0.24
NEDD1-213ENST00000557644 FANK1Q8TC84 345 aa13.56□□□□□ -0.24
NEDD1-213ENST00000557644 SFXN3Q9BWM7 321 aa13.56□□□□□ -0.24
NEDD1-213ENST00000557644 PLA2G12AQ9BZM1 189 aa13.56□□□□□ -0.24
NEDD1-213ENST00000557644 OR52D1Q9H346 318 aa13.56□□□□□ -0.24
NEDD1-213ENST00000557644 NOX1Q9Y5S8 564 aa13.56□□□□□ -0.24
NEDD1-213ENST00000557644 NCOA6Q14686 2063 aaPredicted RBP13.55□□□□□ -0.24
NEDD1-213ENST00000557644 GPR171O14626 319 aa13.55□□□□□ -0.24
NEDD1-213ENST00000557644 CRHP06850 196 aa13.55□□□□□ -0.24
NEDD1-213ENST00000557644 SELENOPP49908 381 aa13.55□□□□□ -0.24
NEDD1-213ENST00000557644 MTFR2Q6P444 385 aa13.55□□□□□ -0.24
NEDD1-213ENST00000557644 FAHD1Q6P587 224 aa13.55□□□□□ -0.24
NEDD1-213ENST00000557644 SVOPLQ8N434 492 aa13.55□□□□□ -0.24
NEDD1-213ENST00000557644 RELL2Q8NC24 303 aaPredicted RBP13.55□□□□□ -0.24
NEDD1-213ENST00000557644 ANKK1Q8NFD2 765 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms