RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 MYO5CQ9NQX4 1742 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 ANKRD26Q9UPS8 1709 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 WDR62O43379 1518 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 ABCC4O15439 1325 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 PHIPQ8WWQ0 1821 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 IQSEC2Q5JU85 1478 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 A0A075B6Q4 140 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 PDHXO00330 501 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 PRKYO43930 277 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 CCDC22O60826 627 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 LRP3O75074 770 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 DNAJB6O75190 326 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 MED6O75586 246 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 GATBO75879 557 aaKnown RBP1.38□□□□□ -2.19
HIF1A-212ENST00000557538 APOA1P02647 267 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 CRYGBP07316 175 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 KRT16P08779 473 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 HOXB7P09629 217 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 NR2C1P13056 603 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 DPP4P27487 766 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 DCKP27707 260 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 MMP12P39900 470 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 ELK3P41970 407 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 SLC6A12P48065 614 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 RPL14P50914 215 aaKnown RBP1.38□□□□□ -2.19
HIF1A-212ENST00000557538 CCR8P51685 355 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 RAP1GDS1P52306 607 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 UBE2G2P60604 165 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 NUTF2P61970 127 aaKnown RBP1.38□□□□□ -2.19
HIF1A-212ENST00000557538 SKP1P63208 163 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 LRRC63Q05C16 580 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 FUT7Q11130 342 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 SPP2Q13103 211 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 EXOSC7Q15024 291 aaKnown RBP1.38□□□□□ -2.19
HIF1A-212ENST00000557538 TSC22D1Q15714 1073 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 TAF1BQ53T94 588 aaPredicted RBP1.38□□□□□ -2.19
HIF1A-212ENST00000557538 CYBRD1Q53TN4 286 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 MEDAGQ5VYS4 303 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 RAET1GQ6H3X3 334 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 REEP3Q6NUK4 255 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 TMEM64Q6YI46 380 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 HSDL2Q6YN16 418 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 MOB2Q70IA6 237 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 TCF24Q7RTU0 167 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 GOLGA7Q7Z5G4 137 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 BBS7Q8IWZ6 715 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 GCNT2Q8N0V5 402 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 LRRC75A-AS1Q8N1F1 130 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 CYP4Z2PQ8N1L4 340 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 COMMD1Q8N668 190 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 C19orf18Q8NEA5 215 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 OR5T1Q8NG75 326 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 CXorf40AQ8TE69 158 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 NAT14Q8WUY8 206 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 DNAJB3Q8WWF6 145 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 PYDC1Q8WXC3 89 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 SPATA13Q96N96 652 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 BIRC8Q96P09 236 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 PANX1Q96RD7 426 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 ZNF251Q9BRH9 671 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 FEM1AQ9BSK4 669 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 UBAC1Q9BSL1 405 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 CHID1Q9BWS9 393 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 SLC39A8Q9C0K1 460 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 TMEM117Q9H0C3 514 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 NEUROG2Q9H2A3 272 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 SLC38A1Q9H2H9 487 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 TMEM38AQ9H6F2 299 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 UGT1A10Q9HAW8 530 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 PDP1Q9P0J1 537 aaPredicted RBP1.38□□□□□ -2.19
HIF1A-212ENST00000557538 KLK13Q9UKR3 277 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 ZNF490Q9ULM2 529 aaPredicted RBP1.38□□□□□ -2.19
HIF1A-212ENST00000557538 PACSIN2Q9UNF0 486 aaPredicted RBP1.38□□□□□ -2.19
HIF1A-212ENST00000557538 ABCG2Q9UNQ0 655 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 PLCL2Q9UPR0 1127 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 RIMS2Q9UQ26 1411 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 KNDC1Q76NI1 1749 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 PCM1Q15154 2024 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 PNPLA6Q8IY17 1366 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 MROH7-TTC4A0A0A0MT08 1334 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 AQRO60306 1485 aaKnown RBP eCLIP1.37□□□□□ -2.193e-6■■□□□ 12.6
HIF1A-212ENST00000557538 PRXQ9BXM0 1461 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 GSTTP1A0A1W2PQM5 241 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 A8MU76 341 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 LEUTXA8MZ59 168 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 TCP11X1B4DZS4 312 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 WRBO00258 174 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 SIGLEC5O15389 551 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 B4GALT5O43286 388 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 SRPX2O60687 465 aaPredicted RBP1.37□□□□□ -2.19
HIF1A-212ENST00000557538 N4BP1O75113 896 aaKnown RBP1.37□□□□□ -2.19
HIF1A-212ENST00000557538 TRIM3O75382 744 aaPredicted RBP1.37□□□□□ -2.19
HIF1A-212ENST00000557538 UPK3AO75631 287 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 TSPAN13O95857 204 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 MT-ATP6P00846 226 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 SERPINA3P01011 423 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 SMIM6P0DI80 62 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 MCF2P10911 925 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 DPEP1P16444 411 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 MSR1P21757 451 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms