RNA–Protein interactions for RNA: ENST00000557348.5

SHMT2-229, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,659 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-229ENST00000557348 POLR2HP52434 150 aaKnown RBP11.51□□□□□ -0.57
SHMT2-229ENST00000557348 IL10RAQ13651 578 aa11.51□□□□□ -0.57
SHMT2-229ENST00000557348 ZNF74Q16587 644 aa11.51□□□□□ -0.57
SHMT2-229ENST00000557348 TATDN3Q17R31 274 aa11.51□□□□□ -0.57
SHMT2-229ENST00000557348 Q5BKY6 102 aa11.51□□□□□ -0.57
SHMT2-229ENST00000557348 EMC4Q5J8M3 183 aa11.51□□□□□ -0.57
SHMT2-229ENST00000557348 SLC35D3Q5M8T2 416 aa11.51□□□□□ -0.57
SHMT2-229ENST00000557348 DCAF12Q5T6F0 453 aa11.51□□□□□ -0.57
SHMT2-229ENST00000557348 PLBD1Q6P4A8 553 aa11.51□□□□□ -0.57
SHMT2-229ENST00000557348 CBLN3Q6UW01 205 aa11.51□□□□□ -0.57
SHMT2-229ENST00000557348 APOOLQ6UXV4 268 aa11.51□□□□□ -0.57
SHMT2-229ENST00000557348 THSD4Q6ZMP0 1018 aa11.51□□□□□ -0.57
SHMT2-229ENST00000557348 GRINAQ7Z429 371 aa11.51□□□□□ -0.57
SHMT2-229ENST00000557348 ACBD7Q8N6N7 88 aa11.51□□□□□ -0.57
SHMT2-229ENST00000557348 POMGNT2Q8NAT1 580 aa11.51□□□□□ -0.57
SHMT2-229ENST00000557348 OR6S1Q8NH40 331 aa11.51□□□□□ -0.57
SHMT2-229ENST00000557348 LHFPL5Q8TAF8 219 aa11.51□□□□□ -0.57
SHMT2-229ENST00000557348 ACOT12Q8WYK0 555 aa11.51□□□□□ -0.57
SHMT2-229ENST00000557348 AKAP1Q92667 903 aaKnown RBP eCLIP11.51□□□□□ -0.57
SHMT2-229ENST00000557348 MR1Q95460 341 aa11.51□□□□□ -0.57
SHMT2-229ENST00000557348 KCTD7Q96MP8 289 aa11.51□□□□□ -0.57
SHMT2-229ENST00000557348 CDC6Q99741 560 aa11.51□□□□□ -0.57
SHMT2-229ENST00000557348 WDR77Q9BQA1 342 aaPredicted RBP11.51□□□□□ -0.57
SHMT2-229ENST00000557348 EMC7Q9NPA0 242 aa11.51□□□□□ -0.57
SHMT2-229ENST00000557348 PLSCR3Q9NRY6 295 aa11.51□□□□□ -0.57
SHMT2-229ENST00000557348 SLC39A1Q9NY26 324 aa11.51□□□□□ -0.57
SHMT2-229ENST00000557348 GLTPQ9NZD2 209 aa11.51□□□□□ -0.57
SHMT2-229ENST00000557348 EMC3Q9P0I2 261 aa11.51□□□□□ -0.57
SHMT2-229ENST00000557348 HIF3AQ9Y2N7 669 aa11.51□□□□□ -0.57
SHMT2-229ENST00000557348 TRAV36DV7A0A075B6V5 113 aa11.5□□□□□ -0.57
SHMT2-229ENST00000557348 A0A0G2JMP0 313 aa11.5□□□□□ -0.57
SHMT2-229ENST00000557348 LNP1A1A4G5 178 aa11.5□□□□□ -0.57
SHMT2-229ENST00000557348 CDC14CA4D256 554 aa11.5□□□□□ -0.57
SHMT2-229ENST00000557348 PPP1R3DO95685 299 aa11.5□□□□□ -0.57
SHMT2-229ENST00000557348 IFNA7P01567 189 aa11.5□□□□□ -0.57
SHMT2-229ENST00000557348 HIST1H2ABP04908 130 aa11.5□□□□□ -0.57
SHMT2-229ENST00000557348 TACR3P29371 465 aa11.5□□□□□ -0.57
SHMT2-229ENST00000557348 KIR2DL3P43628 341 aa11.5□□□□□ -0.57
SHMT2-229ENST00000557348 RAG2P55895 527 aa11.5□□□□□ -0.57
SHMT2-229ENST00000557348 TAS2R43P59537 309 aa11.5□□□□□ -0.57
SHMT2-229ENST00000557348 TPBGQ13641 420 aa11.5□□□□□ -0.57
SHMT2-229ENST00000557348 LPAL2Q16609 132 aa11.5□□□□□ -0.57
SHMT2-229ENST00000557348 GPR139Q6DWJ6 353 aa11.5□□□□□ -0.57
SHMT2-229ENST00000557348 HIST3H2AQ7L7L0 130 aa11.5□□□□□ -0.57
SHMT2-229ENST00000557348 MARCH3Q86UD3 253 aa11.5□□□□□ -0.57
SHMT2-229ENST00000557348 SLC37A3Q8NCC5 494 aa11.5□□□□□ -0.57
SHMT2-229ENST00000557348 LRRC20Q8TCA0 184 aa11.5□□□□□ -0.57
SHMT2-229ENST00000557348 STK35Q8TDR2 534 aa11.5□□□□□ -0.57
SHMT2-229ENST00000557348 RNF138Q8WVD3 245 aa11.5□□□□□ -0.57
SHMT2-229ENST00000557348 UFD1Q92890 307 aa11.5□□□□□ -0.57
SHMT2-229ENST00000557348 HIST1H2ACQ93077 130 aa11.5□□□□□ -0.57
SHMT2-229ENST00000557348 DIRAS2Q96HU8 199 aa11.5□□□□□ -0.57
SHMT2-229ENST00000557348 ERMAPQ96PL5 475 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-229ENST00000557348 FYTTD1Q96QD9 318 aaKnown RBP11.5□□□□□ -0.57
SHMT2-229ENST00000557348 KCNJ15Q99712 375 aa11.5□□□□□ -0.57
SHMT2-229ENST00000557348 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.5□□□□□ -0.57
SHMT2-229ENST00000557348 ZNF700Q9H0M5 742 aa11.5□□□□□ -0.57
SHMT2-229ENST00000557348 MMP25Q9NPA2 562 aa11.5□□□□□ -0.57
SHMT2-229ENST00000557348 TAS2R16Q9NYV7 291 aa11.5□□□□□ -0.57
SHMT2-229ENST00000557348 CHRNA9Q9UGM1 479 aa11.5□□□□□ -0.57
SHMT2-229ENST00000557348 IL20RAQ9UHF4 553 aa11.5□□□□□ -0.57
SHMT2-229ENST00000557348 FKBP7Q9Y680 259 aa11.5□□□□□ -0.57
SHMT2-229ENST00000557348 KMT2EQ8IZD2 1858 aa11.5□□□□□ -0.57
SHMT2-229ENST00000557348 IGKV1D-42A0A075B6H8 117 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 FAM240BA0A1B0GVZ2 78 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 ANKUB1A6NFN9 424 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 SSX4O60224 188 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 SLC19A2O60779 497 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 SLC22A5O76082 557 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 FAM157BP0CG42 384 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 PTNP21246 168 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 ETV5P41161 510 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 ETV1P50549 477 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 DLX5P56178 289 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 CD83Q01151 205 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 EIF3IQ13347 325 aaKnown RBP11.49□□□□□ -0.57
SHMT2-229ENST00000557348 FHL1Q13642 323 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 MFSD13AQ14CX5 517 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 CLLU1Q5K131 121 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 FAM198BQ6UWH4 519 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 C10orf53Q8N6V4 93 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 FAM98AQ8NCA5 519 aaKnown RBP11.49□□□□□ -0.57
SHMT2-229ENST00000557348 OR2Y1Q8NGV0 311 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 CITED4Q96RK1 184 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 ARHGAP9Q9BRR9 750 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 DDA1Q9BW61 102 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 DEFB126Q9BYW3 111 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 BARHL1Q9BZE3 327 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 KCNN2Q9H2S1 579 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 NRIP3Q9NQ35 241 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 TAS2R10Q9NYW0 307 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 MYOTQ9UBF9 498 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 RABL2AQ9UBK7 228 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-229ENST00000557348 CLEC2DQ9UHP7 191 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 RABL2BQ9UNT1 228 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 SDK1Q7Z5N4 2213 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 ZNF318Q5VUA4 2279 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 IGHV3-20A0A0C4DH32 117 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 A0A1B0GVI7 797 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 CDK2AP1O14519 115 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms