RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, human

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCFD1-223	ENST00000557076	GAS2L3	Q86XJ1	694 aa		3.99	□□□□□ -1.77
SCFD1-223	ENST00000557076	CDK20	Q8IZL9	346 aa		3.99	□□□□□ -1.77
SCFD1-223	ENST00000557076	FAM9C	Q8IZT9	166 aa		3.99	□□□□□ -1.77
SCFD1-223	ENST00000557076	MMGT1	Q8N4V1	131 aa		3.99	□□□□□ -1.77
SCFD1-223	ENST00000557076	ATP6V1C2	Q8NEY4	427 aa		3.99	□□□□□ -1.77
SCFD1-223	ENST00000557076	OR52E4	Q8NGH9	312 aa		3.99	□□□□□ -1.77
SCFD1-223	ENST00000557076	OR6Y1	Q8NGX8	325 aa		3.99	□□□□□ -1.77
SCFD1-223	ENST00000557076	CEP70	Q8NHQ1	597 aa		3.99	□□□□□ -1.77
SCFD1-223	ENST00000557076	MAGEE2	Q8TD90	523 aa	Predicted RBP	3.99	□□□□□ -1.77
SCFD1-223	ENST00000557076	YIPF5	Q969M3	257 aa		3.99	□□□□□ -1.77
SCFD1-223	ENST00000557076	LRRC39	Q96DD0	335 aa		3.99	□□□□□ -1.77
SCFD1-223	ENST00000557076	ELP4	Q96EB1	424 aa		3.99	□□□□□ -1.77
SCFD1-223	ENST00000557076	SH3YL1	Q96HL8	342 aa	Predicted RBP	3.99	□□□□□ -1.77
SCFD1-223	ENST00000557076	ZNF48	Q96MX3	618 aa	Predicted RBP	3.99	□□□□□ -1.77
SCFD1-223	ENST00000557076	ATOH8	Q96SQ7	321 aa		3.99	□□□□□ -1.77
SCFD1-223	ENST00000557076	ALG9	Q9H6U8	611 aa		3.99	□□□□□ -1.77
SCFD1-223	ENST00000557076	BRF2	Q9HAW0	419 aa		3.99	□□□□□ -1.77
SCFD1-223	ENST00000557076	NMRAL1	Q9HBL8	299 aa		3.99	□□□□□ -1.77
SCFD1-223	ENST00000557076	DYNLRB1	Q9NP97	96 aa		3.99	□□□□□ -1.77
SCFD1-223	ENST00000557076	PFDN4	Q9NQP4	134 aa		3.99	□□□□□ -1.77
SCFD1-223	ENST00000557076	GIMAP4	Q9NUV9	329 aa		3.99	□□□□□ -1.77
SCFD1-223	ENST00000557076	TMEM45A	Q9NWC5	275 aa		3.99	□□□□□ -1.77
SCFD1-223	ENST00000557076	NSMCE4A	Q9NXX6	385 aa		3.99	□□□□□ -1.77
SCFD1-223	ENST00000557076	NUDT4	Q9NZJ9	180 aa		3.99	□□□□□ -1.77
SCFD1-223	ENST00000557076	SENP1	Q9P0U3	644 aa		3.99	□□□□□ -1.77
SCFD1-223	ENST00000557076	UPB1	Q9UBR1	384 aa		3.99	□□□□□ -1.77
SCFD1-223	ENST00000557076	CMAHP	Q9Y471	501 aa		3.99	□□□□□ -1.77
SCFD1-223	ENST00000557076	ARHGAP32	A7KAX9	2087 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	DNAH3	Q8TD57	4116 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	ARPC4-TTLL3	A0A0A6YYG9	625 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	CCDC154	A6NI56	674 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	LINC00473	A8K010	186 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	SYCE1L	A8MT33	242 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	SUPT3H	B4E1H0	165 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076		M0R233	179 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	UBXN8	O00124	270 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	SUPT3H	O75486	399 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	SEC14L2	O76054	403 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	KCNK2	O95069	426 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	NKX2-2	O95096	273 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	HSPA4L	O95757	839 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	IGKV3-15	P01624	115 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	IGHV2-5	P01817	119 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	CBR1	P16152	277 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	CALCR	P30988	508 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	ATP4B	P51164	291 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	P2RX1	P51575	399 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	RAG2	P55895	527 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	CTXN1	P60606	82 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	RPL15	P61313	204 aa	Known RBP	3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	H3F3A	P84243	136 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	IFT88	Q13099	833 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	SELENBP1	Q13228	472 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	DYRK1A	Q13627	763 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	GTF2H2	Q13888	395 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	GALE	Q14376	348 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	HEPACAM	Q14CZ8	416 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	TOMM34	Q15785	309 aa	Predicted RBP	3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	C2orf68	Q2NKX9	166 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	VPS26B	Q4G0F5	336 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	KLHL26	Q53HC5	615 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	MTX3	Q5HYI7	312 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	KLF17	Q5JT82	389 aa	Predicted RBP	3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	TSPO2	Q5TGU0	170 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	FAM205BP	Q63HN1	556 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	TTC19	Q6DKK2	380 aa	Predicted RBP	3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	GTF2H2C	Q6P1K8	395 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	GATS	Q8NAP1	163 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	POMGNT2	Q8NAT1	580 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	ZBTB34	Q8NCN2	500 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	DEFB108B	Q8NET1	73 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	RHEBL1	Q8TAI7	183 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	PPP1R35	Q8TAP8	253 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	PIGX	Q8TBF5	258 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	GPR151	Q8TDV0	419 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	BCL2L2	Q92843	193 aa	Predicted RBP	3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	PMM1	Q92871	262 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	MAGOHB	Q96A72	148 aa	Known RBP	3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	ZNF524	Q96C55	264 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	OR5B2	Q96R09	309 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	RBBP8	Q99708	897 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	SLC30A2	Q9BRI3	323 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	TRIM5	Q9C035	493 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	MS4A7	Q9GZW8	240 aa	Predicted RBP	3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	TPK1	Q9H3S4	243 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	ZNF385D	Q9H6B1	395 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	NOL11	Q9H8H0	719 aa	Known RBP	3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	SERINC1	Q9NRX5	453 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	NECAP2	Q9NVZ3	263 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	C1RL	Q9NZP8	487 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	VPS29	Q9UBQ0	182 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	GRID1	Q9ULK0	1009 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	NFU1	Q9UMS0	254 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	SLC12A4	Q9UP95	1085 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	TRAPPC4	Q9Y296	219 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	AUP1	Q9Y679	476 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	TEX264	Q9Y6I9	313 aa		3.98	□□□□□ -1.77
SCFD1-223	ENST00000557076	RYR1	P21817	5038 aa		3.97	□□□□□ -1.77
SCFD1-223	ENST00000557076	OR6C65	A6NJZ3	312 aa		3.97	□□□□□ -1.77
SCFD1-223	ENST00000557076		H3BNH8	94 aa		3.97	□□□□□ -1.77

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