RNA–Protein interactions for RNA: ENST00000555658.5

FOXN3-210, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-210ENST00000555658 ZDHHC21Q8IVQ6 265 aa3.75□□□□□ -1.81
FOXN3-210ENST00000555658 CCDC36Q8IYA8 594 aa3.75□□□□□ -1.81
FOXN3-210ENST00000555658 LINC00518Q8N0U6 118 aa3.75□□□□□ -1.81
FOXN3-210ENST00000555658 TAGAPQ8N103 731 aa3.75□□□□□ -1.81
FOXN3-210ENST00000555658 ZNF527Q8NB42 609 aa3.75□□□□□ -1.81
FOXN3-210ENST00000555658 PAPD5Q8NDF8 572 aaKnown RBP3.75□□□□□ -1.81
FOXN3-210ENST00000555658 CHDHQ8NE62 594 aaPredicted RBP3.75□□□□□ -1.81
FOXN3-210ENST00000555658 CATSPER1Q8NEC5 780 aa3.75□□□□□ -1.81
FOXN3-210ENST00000555658 C17orf47Q8NEP4 570 aa3.75□□□□□ -1.81
FOXN3-210ENST00000555658 ZNF721Q8TF20 911 aa3.75□□□□□ -1.81
FOXN3-210ENST00000555658 CT55Q8WUE5 264 aa3.75□□□□□ -1.81
FOXN3-210ENST00000555658 TMEM171Q8WVE6 324 aa3.75□□□□□ -1.81
FOXN3-210ENST00000555658 OIT3Q8WWZ8 545 aa3.75□□□□□ -1.81
FOXN3-210ENST00000555658 PIK3R3Q92569 461 aa3.75□□□□□ -1.81
FOXN3-210ENST00000555658 HDAC2Q92769 488 aaKnown RBP3.75□□□□□ -1.81
FOXN3-210ENST00000555658 OTUB1Q96FW1 271 aaPredicted RBP3.75□□□□□ -1.81
FOXN3-210ENST00000555658 RMND5BQ96G75 393 aaPredicted RBP3.75□□□□□ -1.81
FOXN3-210ENST00000555658 ZNF845Q96IR2 970 aaPredicted RBP3.75□□□□□ -1.81
FOXN3-210ENST00000555658 VSTM2LQ96N03 204 aa3.75□□□□□ -1.81
FOXN3-210ENST00000555658 IP6K3Q96PC2 410 aa3.75□□□□□ -1.81
FOXN3-210ENST00000555658 BTBD9Q96Q07 612 aa3.75□□□□□ -1.81
FOXN3-210ENST00000555658 GAL3ST4Q96RP7 486 aa3.75□□□□□ -1.81
FOXN3-210ENST00000555658 ZNF347Q96SE7 839 aa3.75□□□□□ -1.81
FOXN3-210ENST00000555658 SDF2Q99470 211 aa3.75□□□□□ -1.81
FOXN3-210ENST00000555658 CHCHD6Q9BRQ6 235 aa3.75□□□□□ -1.81
FOXN3-210ENST00000555658 LMF2Q9BU23 707 aaKnown RBP3.75□□□□□ -1.81
FOXN3-210ENST00000555658 NUDT9Q9BW91 350 aa3.75□□□□□ -1.81
FOXN3-210ENST00000555658 DEFB126Q9BYW3 111 aa3.75□□□□□ -1.81
FOXN3-210ENST00000555658 MS4A7Q9GZW8 240 aaPredicted RBP3.75□□□□□ -1.81
FOXN3-210ENST00000555658 HOXD1Q9GZZ0 328 aa3.75□□□□□ -1.81
FOXN3-210ENST00000555658 HIPK2Q9H2X6 1198 aa3.75□□□□□ -1.81
FOXN3-210ENST00000555658 GPN2Q9H9Y4 310 aaPredicted RBP3.75□□□□□ -1.81
FOXN3-210ENST00000555658 IL1RAPQ9NPH3 570 aa3.75□□□□□ -1.81
FOXN3-210ENST00000555658 PLSCR4Q9NRQ2 329 aa3.75□□□□□ -1.81
FOXN3-210ENST00000555658 UBQLN4Q9NRR5 601 aa3.75□□□□□ -1.81
FOXN3-210ENST00000555658 DNAJB9Q9UBS3 223 aa3.75□□□□□ -1.81
FOXN3-210ENST00000555658 MKLN1Q9UL63 735 aa3.75□□□□□ -1.81
FOXN3-210ENST00000555658 PPIEQ9UNP9 301 aaKnown RBP3.75□□□□□ -1.81
FOXN3-210ENST00000555658 SLC9A8Q9Y2E8 581 aa3.75□□□□□ -1.81
FOXN3-210ENST00000555658 IFT52Q9Y366 437 aa3.75□□□□□ -1.81
FOXN3-210ENST00000555658 WDR45Q9Y484 360 aa3.75□□□□□ -1.81
FOXN3-210ENST00000555658 KCNE3Q9Y6H6 103 aa3.75□□□□□ -1.81
FOXN3-210ENST00000555658 V9GYQ6 96 aa3.75□□□□□ -1.81
FOXN3-210ENST00000555658 LAMA1P25391 3075 aa3.75□□□□□ -1.81
FOXN3-210ENST00000555658 IGHV1-45A0A0A0MS14 117 aa3.74□□□□□ -1.81
FOXN3-210ENST00000555658 IGHV3-20A0A0C4DH32 117 aa3.74□□□□□ -1.81
FOXN3-210ENST00000555658 TRBV11-1A0A0K0K1C0 115 aa3.74□□□□□ -1.81
FOXN3-210ENST00000555658 A0A1W2PNU3 283 aaPredicted RBP3.74□□□□□ -1.81
FOXN3-210ENST00000555658 LOC390937A0A1W2PQ73 354 aa3.74□□□□□ -1.81
FOXN3-210ENST00000555658 GXYLT2A0PJZ3 443 aa3.74□□□□□ -1.81
FOXN3-210ENST00000555658 TRABD2BA6NFA1 517 aa3.74□□□□□ -1.81
FOXN3-210ENST00000555658 AGAP5A6NIR3 686 aa3.74□□□□□ -1.81
FOXN3-210ENST00000555658 CDRT15L2A8MXV6 281 aa3.74□□□□□ -1.81
FOXN3-210ENST00000555658 HSBP1L1C9JCN9 74 aa3.74□□□□□ -1.81
FOXN3-210ENST00000555658 H3BNH8 94 aa3.74□□□□□ -1.81
FOXN3-210ENST00000555658 hCG_2039718K7EN88 272 aa3.74□□□□□ -1.81
FOXN3-210ENST00000555658 SYT5O00445 386 aa3.74□□□□□ -1.81
FOXN3-210ENST00000555658 ADAMDEC1O15204 470 aa3.74□□□□□ -1.81
FOXN3-210ENST00000555658 CNOT3O75175 753 aaKnown RBP3.74□□□□□ -1.81
FOXN3-210ENST00000555658 NME6O75414 186 aaPredicted RBP3.74□□□□□ -1.81
FOXN3-210ENST00000555658 GCM2O75603 506 aaPredicted RBP3.74□□□□□ -1.81
FOXN3-210ENST00000555658 REM1O75628 298 aa3.74□□□□□ -1.81
FOXN3-210ENST00000555658 CBR3O75828 277 aa3.74□□□□□ -1.81
FOXN3-210ENST00000555658 KCNK2O95069 426 aa3.74□□□□□ -1.81
FOXN3-210ENST00000555658 CST1P01037 141 aa3.74□□□□□ -1.81
FOXN3-210ENST00000555658 OPN1SWP03999 348 aa3.74□□□□□ -1.81
FOXN3-210ENST00000555658 IFNW1P05000 195 aa3.74□□□□□ -1.81
FOXN3-210ENST00000555658 ALPPP05187 535 aa3.74□□□□□ -1.81
FOXN3-210ENST00000555658 UMODP07911 640 aa3.74□□□□□ -1.81
FOXN3-210ENST00000555658 CHRM4P08173 479 aa3.74□□□□□ -1.81
FOXN3-210ENST00000555658 CT45A8P0DMV1 189 aa3.74□□□□□ -1.81
FOXN3-210ENST00000555658 CT45A9P0DMV2 189 aa3.74□□□□□ -1.81
FOXN3-210ENST00000555658 CCNA2P20248 432 aa3.74□□□□□ -1.81
FOXN3-210ENST00000555658 IL12BP29460 328 aa3.74□□□□□ -1.81
FOXN3-210ENST00000555658 OTX2P32243 289 aa3.74□□□□□ -1.81
FOXN3-210ENST00000555658 MAP3K8P41279 467 aa3.74□□□□□ -1.81
FOXN3-210ENST00000555658 GPR143P51810 404 aa3.74□□□□□ -1.81
FOXN3-210ENST00000555658 NR0B1P51843 470 aaKnown RBP3.74□□□□□ -1.81
FOXN3-210ENST00000555658 PNLIPRP2P54317 469 aa3.74□□□□□ -1.81
FOXN3-210ENST00000555658 ATP12AP54707 1039 aa3.74□□□□□ -1.81
FOXN3-210ENST00000555658 P2RX3P56373 397 aa3.74□□□□□ -1.81
FOXN3-210ENST00000555658 FOXL2P58012 376 aa3.74□□□□□ -1.81
FOXN3-210ENST00000555658 DNASE1L3Q13609 305 aa3.74□□□□□ -1.81
FOXN3-210ENST00000555658 EBPQ15125 230 aaKnown RBP3.74□□□□□ -1.81
FOXN3-210ENST00000555658 TRIP10Q15642 601 aa3.74□□□□□ -1.81
FOXN3-210ENST00000555658 MAPK11Q15759 364 aa3.74□□□□□ -1.81
FOXN3-210ENST00000555658 ATP6AP1Q15904 470 aa3.74□□□□□ -1.81
FOXN3-210ENST00000555658 SGCAQ16586 387 aa3.74□□□□□ -1.81
FOXN3-210ENST00000555658 DUSP7Q16829 419 aa3.74□□□□□ -1.81
FOXN3-210ENST00000555658 LIN52Q52LA3 116 aa3.74□□□□□ -1.81
FOXN3-210ENST00000555658 EIPR1Q53HC9 387 aa3.74□□□□□ -1.81
FOXN3-210ENST00000555658 CT45A2Q5DJT8 189 aa3.74□□□□□ -1.81
FOXN3-210ENST00000555658 FAM209BQ5JX69 171 aa3.74□□□□□ -1.81
FOXN3-210ENST00000555658 PLAG1Q6DJT9 500 aa3.74□□□□□ -1.81
FOXN3-210ENST00000555658 GPR139Q6DWJ6 353 aa3.74□□□□□ -1.81
FOXN3-210ENST00000555658 DHRS4L2Q6PKH6 230 aa3.74□□□□□ -1.81
FOXN3-210ENST00000555658 ENPP6Q6UWR7 440 aa3.74□□□□□ -1.81
FOXN3-210ENST00000555658 DEF8Q6ZN54 512 aa3.74□□□□□ -1.81
FOXN3-210ENST00000555658 C9orf47Q6ZRZ4 202 aa3.74□□□□□ -1.81
FOXN3-210ENST00000555658 PIWIL3Q7Z3Z3 882 aaKnown RBP3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms