RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 BMFQ96LC9 184 aa10.86□□□□□ -0.67
XRCC3-208ENST00000554811 MOGAT1Q96PD6 335 aa10.86□□□□□ -0.67
XRCC3-208ENST00000554811 DHCR7Q9UBM7 475 aaKnown RBP10.86□□□□□ -0.67
XRCC3-208ENST00000554811 DOCK8Q8NF50 2099 aa10.86□□□□□ -0.67
XRCC3-208ENST00000554811 CXorf51AA0A1B0GTR3 108 aa10.86□□□□□ -0.67
XRCC3-208ENST00000554811 PLPP2O43688 288 aa10.86□□□□□ -0.67
XRCC3-208ENST00000554811 PRICKLE3O43900 615 aaPredicted RBP10.86□□□□□ -0.67
XRCC3-208ENST00000554811 TNFP01375 233 aa10.86□□□□□ -0.67
XRCC3-208ENST00000554811 PDGFAP04085 211 aa10.86□□□□□ -0.67
XRCC3-208ENST00000554811 THEGLP0DJG4 465 aa10.86□□□□□ -0.67
XRCC3-208ENST00000554811 PSMB1P20618 241 aaKnown RBP10.86□□□□□ -0.67
XRCC3-208ENST00000554811 ENPP1P22413 925 aa10.86□□□□□ -0.67
XRCC3-208ENST00000554811 ART1P52961 327 aa10.86□□□□□ -0.67
XRCC3-208ENST00000554811 PER3P56645 1201 aa10.86□□□□□ -0.67
XRCC3-208ENST00000554811 RPS15P62841 145 aaKnown RBP10.86□□□□□ -0.67
XRCC3-208ENST00000554811 AKIRIN2Q53H80 203 aa10.86□□□□□ -0.67
XRCC3-208ENST00000554811 ZBTB37Q5TC79 503 aa10.86□□□□□ -0.67
XRCC3-208ENST00000554811 LRFN4Q6PJG9 635 aa10.86□□□□□ -0.67
XRCC3-208ENST00000554811 TEX261Q6UWH6 196 aa10.86□□□□□ -0.67
XRCC3-208ENST00000554811 ZNF485Q8NCK3 441 aa10.86□□□□□ -0.67
XRCC3-208ENST00000554811 OR56B4Q8NH76 319 aa10.86□□□□□ -0.67
XRCC3-208ENST00000554811 COMMD4Q9H0A8 199 aa10.86□□□□□ -0.67
XRCC3-208ENST00000554811 DUSP22Q9NRW4 184 aa10.86□□□□□ -0.67
XRCC3-208ENST00000554811 MRPS18AQ9NVS2 196 aaKnown RBP10.86□□□□□ -0.67
XRCC3-208ENST00000554811 MAB21L2Q9Y586 359 aa10.86□□□□□ -0.67
XRCC3-208ENST00000554811 U3KQ87 197 aa10.86□□□□□ -0.67
XRCC3-208ENST00000554811 NCOR1O75376 2440 aa10.86□□□□□ -0.67
XRCC3-208ENST00000554811 CACNA1EQ15878 2313 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 FREM3P0C091 2139 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 C17orf105B2RV13 164 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 CBX7O95931 251 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 MYF5P13349 255 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 NANOS3P60323 173 aaKnown RBP10.85□□□□□ -0.67
XRCC3-208ENST00000554811 BTN1A1Q13410 526 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 MEP1BQ16820 701 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 LINC00303Q3SY05 128 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 ESCO2Q56NI9 601 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 ARHGAP40Q5TG30 622 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 RPL13AP3Q6NVV1 102 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 MED25Q71SY5 747 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 MCATQ8IVS2 390 aaKnown RBP10.85□□□□□ -0.67
XRCC3-208ENST00000554811 CA13Q8N1Q1 262 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 FAM181AQ8N9Y4 354 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 C16orf52Q8NHV5 167 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 CASTOR1Q8WTX7 329 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 METTL21AQ8WXB1 218 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 WDR76Q9H967 626 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 HRASLSQ9HDD0 168 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 GDE1Q9NZC3 331 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 GALR3O60755 368 aaPredicted RBP10.85□□□□□ -0.67
XRCC3-208ENST00000554811 RAF1P04049 648 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 ATP1B1P05026 303 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 RNH1P13489 461 aaKnown RBP10.85□□□□□ -0.67
XRCC3-208ENST00000554811 CXCR1P25024 350 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 MAP3K8P41279 467 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 PSG6Q00889 435 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 HTR4Q13639 388 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 PRICKLE4Q2TBC4 344 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 RNLSQ5VYX0 342 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 MAMSTRQ6ZN01 415 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 TPRA1Q86W33 373 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 PM20D2Q8IYS1 436 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 RNF113BQ8IZP6 322 aaKnown RBP10.85□□□□□ -0.67
XRCC3-208ENST00000554811 GALNT11Q8NCW6 608 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 OR51Q1Q8NH59 317 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 AHCYL2Q96HN2 611 aaKnown RBP10.85□□□□□ -0.67
XRCC3-208ENST00000554811 MRGPRX1Q96LB2 322 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 PGLYRP3Q96LB9 341 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 OR2M2Q96R28 347 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 NKX2-4Q9H2Z4 354 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 C2orf42Q9NWW7 574 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 FBXL2Q9UKC9 423 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 SLC22A13Q9Y226 551 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 POLR1DQ9Y2S0 133 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 A0A0B4J2E0 115 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 A0A1B0GX12 115 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 LEUTXA8MZ59 168 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 K7EQS6 105 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 SOX1O00570 391 aaPredicted RBP10.85□□□□□ -0.67
XRCC3-208ENST00000554811 CREBL2O60519 120 aaPredicted RBP10.85□□□□□ -0.67
XRCC3-208ENST00000554811 RBBP9O75884 186 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 THBS1P07996 1170 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 OR2T7P0C7T2 308 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 THBS2P35442 1172 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 CDKN2AP42771 156 aaKnown RBP10.85□□□□□ -0.67
XRCC3-208ENST00000554811 TPMTP51580 245 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 PLA2G7Q13093 441 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 MELKQ14680 651 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 C1QL3Q5VWW1 255 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 NLRC3Q7RTR2 1065 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 ZNF550Q7Z398 422 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 OR2T27Q8NH04 317 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 LMX1AQ8TE12 382 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 ADAMTS14Q8WXS8 1223 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 ATOH1Q92858 354 aaPredicted RBP10.85□□□□□ -0.67
XRCC3-208ENST00000554811 CMKLR1Q99788 373 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 ZNF436Q9C0F3 470 aaPredicted RBP10.85□□□□□ -0.67
XRCC3-208ENST00000554811 C14orf105Q9NVL8 296 aa10.85□□□□□ -0.67
XRCC3-208ENST00000554811 CGGBP1Q9UFW8 167 aaPredicted RBP10.85□□□□□ -0.67
XRCC3-208ENST00000554811 ZNF223Q9UK11 482 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms