RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 TERB2Q8NHR7 220 aa4.02□□□□□ -1.77
ATXN3-227ENST00000554491 WDR36Q8NI36 951 aaKnown RBP4.02□□□□□ -1.77
ATXN3-227ENST00000554491 DYNC2LI1Q8TCX1 351 aa4.02□□□□□ -1.77
ATXN3-227ENST00000554491 C1orf54Q8WWF1 131 aa4.02□□□□□ -1.77
ATXN3-227ENST00000554491 KCNE4Q8WWG9 221 aa4.02□□□□□ -1.77
ATXN3-227ENST00000554491 KAT2AQ92830 837 aa4.02□□□□□ -1.77
ATXN3-227ENST00000554491 OSTF1Q92882 214 aa4.02□□□□□ -1.77
ATXN3-227ENST00000554491 ADIPOR1Q96A54 375 aa4.02□□□□□ -1.77
ATXN3-227ENST00000554491 SPSB1Q96BD6 273 aa4.02□□□□□ -1.77
ATXN3-227ENST00000554491 SAT2Q96F10 170 aaPredicted RBP4.02□□□□□ -1.77
ATXN3-227ENST00000554491 LRRC46Q96FV0 321 aa4.02□□□□□ -1.77
ATXN3-227ENST00000554491 OXNAD1Q96HP4 312 aaPredicted RBP4.02□□□□□ -1.77
ATXN3-227ENST00000554491 FER1L6-AS2Q96M78 137 aa4.02□□□□□ -1.77
ATXN3-227ENST00000554491 TMEM56Q96MV1 263 aa4.02□□□□□ -1.77
ATXN3-227ENST00000554491 SLC38A2Q96QD8 506 aa4.02□□□□□ -1.77
ATXN3-227ENST00000554491 FYTTD1Q96QD9 318 aaKnown RBP4.02□□□□□ -1.77
ATXN3-227ENST00000554491 CSF3RQ99062 836 aa4.02□□□□□ -1.77
ATXN3-227ENST00000554491 STACQ99469 402 aa4.02□□□□□ -1.77
ATXN3-227ENST00000554491 VAT1Q99536 393 aa4.02□□□□□ -1.77
ATXN3-227ENST00000554491 PHB2Q99623 299 aa4.02□□□□□ -1.77
ATXN3-227ENST00000554491 RBBP8Q99708 897 aa4.02□□□□□ -1.77
ATXN3-227ENST00000554491 CMKLR1Q99788 373 aa4.02□□□□□ -1.77
ATXN3-227ENST00000554491 UTP23Q9BRU9 249 aaKnown RBP4.02□□□□□ -1.77
ATXN3-227ENST00000554491 SLC35A5Q9BS91 424 aa4.02□□□□□ -1.77
ATXN3-227ENST00000554491 TRIM51Q9BSJ1 452 aa4.02□□□□□ -1.77
ATXN3-227ENST00000554491 SCNM1Q9BWG6 230 aa4.02□□□□□ -1.77
ATXN3-227ENST00000554491 FSD1LQ9BXM9 530 aa4.02□□□□□ -1.77
ATXN3-227ENST00000554491 EGLN1Q9GZT9 426 aa4.02□□□□□ -1.77
ATXN3-227ENST00000554491 NUAK2Q9H093 628 aa4.02□□□□□ -1.77
ATXN3-227ENST00000554491 PPP1R3EQ9H7J1 279 aa4.02□□□□□ -1.77
ATXN3-227ENST00000554491 HEXA-AS1Q9H8Q6 139 aa4.02□□□□□ -1.77
ATXN3-227ENST00000554491 CHODLQ9H9P2 273 aa4.02□□□□□ -1.77
ATXN3-227ENST00000554491 TPT1P8Q9HAU6 139 aa4.02□□□□□ -1.77
ATXN3-227ENST00000554491 POPDC2Q9HBU9 364 aa4.02□□□□□ -1.77
ATXN3-227ENST00000554491 CSNK1G1Q9HCP0 422 aa4.02□□□□□ -1.77
ATXN3-227ENST00000554491 FZD3Q9NPG1 666 aa4.02□□□□□ -1.77
ATXN3-227ENST00000554491 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.02□□□□□ -1.77
ATXN3-227ENST00000554491 DDIT4Q9NX09 232 aa4.02□□□□□ -1.77
ATXN3-227ENST00000554491 KLHL13Q9P2N7 655 aa4.02□□□□□ -1.77
ATXN3-227ENST00000554491 SLC17A7Q9P2U7 560 aa4.02□□□□□ -1.77
ATXN3-227ENST00000554491 ARMCX3Q9UH62 379 aaPredicted RBP4.02□□□□□ -1.77
ATXN3-227ENST00000554491 NUFIP1Q9UHK0 495 aaKnown RBP4.02□□□□□ -1.77
ATXN3-227ENST00000554491 SLCO3A1Q9UIG8 710 aa4.02□□□□□ -1.77
ATXN3-227ENST00000554491 ZNF580Q9UK33 172 aa4.02□□□□□ -1.77
ATXN3-227ENST00000554491 PRPF19Q9UMS4 504 aaKnown RBP4.02□□□□□ -1.77
ATXN3-227ENST00000554491 NENFQ9UMX5 172 aa4.02□□□□□ -1.77
ATXN3-227ENST00000554491 POMPQ9Y244 141 aa4.02□□□□□ -1.77
ATXN3-227ENST00000554491 TBL2Q9Y4P3 447 aaKnown RBP4.02□□□□□ -1.77
ATXN3-227ENST00000554491 NEUROG3Q9Y4Z2 214 aa4.02□□□□□ -1.77
ATXN3-227ENST00000554491 TMEM56-RWDD3S4R434 201 aa4.02□□□□□ -1.77
ATXN3-227ENST00000554491 NUP205Q92621 2012 aa4.02□□□□□ -1.77
ATXN3-227ENST00000554491 SDK1Q7Z5N4 2213 aa4.02□□□□□ -1.77
ATXN3-227ENST00000554491 NFASCO94856 1347 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 KIF26AQ9ULI4 1882 aaPredicted RBP4.01□□□□□ -1.77
ATXN3-227ENST00000554491 FREM2Q5SZK8 3169 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 DOCK6Q96HP0 2047 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 CCDC187A0A096LP49 1063 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 OR52A4PA6NMU1 304 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 A8MWP6 167 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 NPIPB9F8W1W9 429 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 F8WDY8 70 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 IMPA2O14732 288 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 MRASO14807 208 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 UBDO15205 165 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 FFAR2O15552 330 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 TGFB1I1O43294 461 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 RNF13O43567 381 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 XPNPEP2O43895 674 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 TPST1O60507 370 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 RAMP3O60896 148 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 OR2J2O76002 312 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 CXCL14O95715 111 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 C6orf47O95873 294 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 MT-ATP6P00846 226 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 PRB1P04280 392 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 ANXA4P09525 319 aaPredicted RBP4.01□□□□□ -1.77
ATXN3-227ENST00000554491 H2AFZP0C0S5 128 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 G6PDP11413 515 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 UCHL3P15374 230 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 EPCAMP16422 314 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 PGAM1P18669 254 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 BGNP21810 368 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 UBA1P22314 1058 aaKnown RBP4.01□□□□□ -1.77
ATXN3-227ENST00000554491 RPS3P23396 243 aaKnown RBP eCLIP4.01□□□□□ -1.77
ATXN3-227ENST00000554491 STOMP27105 288 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 S100A2P29034 98 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 GNRHRP30968 328 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 CD52P31358 61 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 SFNP31947 248 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 GRK5P34947 590 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 IFNGR2P38484 337 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 CD200P41217 278 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 P2RY2P41231 377 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 QARSP47897 775 aaKnown RBP4.01□□□□□ -1.77
ATXN3-227ENST00000554491 NPY4RP50391 375 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 RORCP51449 518 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 TDGF1P3P51864 188 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 LINC00205P59089 165 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 SNRPD2P62316 118 aaKnown RBP4.01□□□□□ -1.77
ATXN3-227ENST00000554491 SELENOTP62341 195 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms