RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 ACTR6Q9GZN1 396 aa8.25□□□□□ -1.09
CHD8-206ENST00000553870 NGBQ9NPG2 151 aa8.25□□□□□ -1.09
CHD8-206ENST00000553870 MEPEQ9NQ76 525 aaPredicted RBP8.25□□□□□ -1.09
CHD8-206ENST00000553870 RASSF1Q9NS23 344 aa8.25□□□□□ -1.09
CHD8-206ENST00000553870 TAS2R16Q9NYV7 291 aa8.25□□□□□ -1.09
CHD8-206ENST00000553870 EDARQ9UNE0 448 aa8.25□□□□□ -1.09
CHD8-206ENST00000553870 ADGRG4Q8IZF6 3080 aa8.24□□□□□ -1.09
CHD8-206ENST00000553870 CACNA1DQ01668 2161 aa8.24□□□□□ -1.09
CHD8-206ENST00000553870 ZNF726A6NNF4 738 aa8.24□□□□□ -1.09
CHD8-206ENST00000553870 RPL36A-HNRNPH2H7BZ11 118 aa8.24□□□□□ -1.09
CHD8-206ENST00000553870 J3KTA2 159 aa8.24□□□□□ -1.09
CHD8-206ENST00000553870 SLC43A1O75387 559 aa8.24□□□□□ -1.09
CHD8-206ENST00000553870 DNAJC8O75937 253 aaPredicted RBP8.24□□□□□ -1.09
CHD8-206ENST00000553870 KRT33AO76009 404 aa8.24□□□□□ -1.09
CHD8-206ENST00000553870 KRT36O76013 467 aa8.24□□□□□ -1.09
CHD8-206ENST00000553870 OR7A10O76100 309 aa8.24□□□□□ -1.09
CHD8-206ENST00000553870 SEMG1P04279 462 aa8.24□□□□□ -1.09
CHD8-206ENST00000553870 TSPAN19P0C672 248 aa8.24□□□□□ -1.09
CHD8-206ENST00000553870 UMPSP11172 480 aa8.24□□□□□ -1.09
CHD8-206ENST00000553870 PRF1P14222 555 aa8.24□□□□□ -1.09
CHD8-206ENST00000553870 HOXB1P14653 301 aaPredicted RBP8.24□□□□□ -1.09
CHD8-206ENST00000553870 IGHV1-2P23083 117 aa8.24□□□□□ -1.09
CHD8-206ENST00000553870 AHCYP23526 432 aa8.24□□□□□ -1.09
CHD8-206ENST00000553870 MPGP29372 298 aa8.24□□□□□ -1.09
CHD8-206ENST00000553870 MSX2P35548 267 aaPredicted RBP8.24□□□□□ -1.09
CHD8-206ENST00000553870 YAP1P46937 504 aaKnown RBP8.24□□□□□ -1.09
CHD8-206ENST00000553870 SLC9A3P48764 834 aa8.24□□□□□ -1.09
CHD8-206ENST00000553870 UGT2B15P54855 530 aa8.24□□□□□ -1.09
CHD8-206ENST00000553870 CLDN17P56750 224 aa8.24□□□□□ -1.09
CHD8-206ENST00000553870 FAPQ12884 760 aa8.24□□□□□ -1.09
CHD8-206ENST00000553870 SNTB1Q13884 538 aaKnown RBP8.24□□□□□ -1.09
CHD8-206ENST00000553870 STK11Q15831 433 aa8.24□□□□□ -1.09
CHD8-206ENST00000553870 IQCCQ4KMZ1 466 aa8.24□□□□□ -1.09
CHD8-206ENST00000553870 TIMM23BQ5SRD1 257 aa8.24□□□□□ -1.09
CHD8-206ENST00000553870 TSPO2Q5TGU0 170 aa8.24□□□□□ -1.09
CHD8-206ENST00000553870 ZNF730Q6ZMV8 503 aa8.24□□□□□ -1.09
CHD8-206ENST00000553870 BHLHA15Q7RTS1 189 aaPredicted RBP8.24□□□□□ -1.09
CHD8-206ENST00000553870 SLC46A3Q7Z3Q1 461 aa8.24□□□□□ -1.09
CHD8-206ENST00000553870 TSEN54Q7Z6J9 526 aaKnown RBP8.24□□□□□ -1.09
CHD8-206ENST00000553870 C17orf78Q8N4C9 275 aa8.24□□□□□ -1.09
CHD8-206ENST00000553870 C1orf162Q8NEQ5 155 aaPredicted RBP8.24□□□□□ -1.09
CHD8-206ENST00000553870 SLC7A6OSQ96CW6 309 aaPredicted RBP8.24□□□□□ -1.09
CHD8-206ENST00000553870 BPIFA2Q96DR5 249 aa8.24□□□□□ -1.09
CHD8-206ENST00000553870 MUCL1Q96DR8 90 aa8.24□□□□□ -1.09
CHD8-206ENST00000553870 DHRS1Q96LJ7 313 aa8.24□□□□□ -1.09
CHD8-206ENST00000553870 ADAD1Q96M93 576 aaKnown RBP8.24□□□□□ -1.09
CHD8-206ENST00000553870 TRIM15Q9C019 465 aa8.24□□□□□ -1.09
CHD8-206ENST00000553870 MMADHCQ9H3L0 296 aaPredicted RBP8.24□□□□□ -1.09
CHD8-206ENST00000553870 MAGIXQ9H6Y5 334 aa8.24□□□□□ -1.09
CHD8-206ENST00000553870 KRCC1Q9NPI7 259 aaPredicted RBP8.24□□□□□ -1.09
CHD8-206ENST00000553870 SLC7A10Q9NS82 523 aa8.24□□□□□ -1.09
CHD8-206ENST00000553870 MAN2C1Q9NTJ4 1040 aa8.24□□□□□ -1.09
CHD8-206ENST00000553870 TAS2R5Q9NYW4 299 aa8.24□□□□□ -1.09
CHD8-206ENST00000553870 STX18Q9P2W9 335 aaKnown RBP8.24□□□□□ -1.09
CHD8-206ENST00000553870 ANKHD1Q8IWZ3 2542 aaKnown RBP8.24□□□□□ -1.09
CHD8-206ENST00000553870 UTP20O75691 2785 aaKnown RBP8.23□□□□□ -1.09
CHD8-206ENST00000553870 FREM1Q5H8C1 2179 aa8.23□□□□□ -1.09
CHD8-206ENST00000553870 NBPF19A0A087WUL8 3843 aa8.23□□□□□ -1.09
CHD8-206ENST00000553870 A0A087WUU8 490 aa8.23□□□□□ -1.09
CHD8-206ENST00000553870 CIB4A0PJX0 185 aa8.23□□□□□ -1.09
CHD8-206ENST00000553870 NPIPB13A6NJU9 1138 aa8.23□□□□□ -1.09
CHD8-206ENST00000553870 AQP12BA6NM10 295 aa8.23□□□□□ -1.09
CHD8-206ENST00000553870 ENO4A6NNW6 628 aa8.23□□□□□ -1.09
CHD8-206ENST00000553870 CENPBD1B2RD01 187 aa8.23□□□□□ -1.09
CHD8-206ENST00000553870 NPIPB4C9JG80 1138 aa8.23□□□□□ -1.09
CHD8-206ENST00000553870 ZNF587BE7ETH6 402 aa8.23□□□□□ -1.09
CHD8-206ENST00000553870 LRRN3E7EW58 273 aa8.23□□□□□ -1.09
CHD8-206ENST00000553870 BLOC1S5-TXNDC5H3BN57 136 aa8.23□□□□□ -1.09
CHD8-206ENST00000553870 KPNA4O00629 521 aaPredicted RBP8.23□□□□□ -1.09
CHD8-206ENST00000553870 RNF13O43567 381 aa8.23□□□□□ -1.09
CHD8-206ENST00000553870 TRAF3IP2O43734 574 aaPredicted RBP8.23□□□□□ -1.09
CHD8-206ENST00000553870 HPRP00739 348 aa8.23□□□□□ -1.09
CHD8-206ENST00000553870 FABP3P05413 133 aa8.23□□□□□ -1.09
CHD8-206ENST00000553870 IFI30P13284 250 aa8.23□□□□□ -1.09
CHD8-206ENST00000553870 CBLP22681 906 aa8.23□□□□□ -1.09
CHD8-206ENST00000553870 EDNRAP25101 427 aa8.23□□□□□ -1.09
CHD8-206ENST00000553870 CCKARP32238 428 aa8.23□□□□□ -1.09
CHD8-206ENST00000553870 SELENOPP49908 381 aa8.23□□□□□ -1.09
CHD8-206ENST00000553870 HMGA2P52926 109 aa8.23□□□□□ -1.09
CHD8-206ENST00000553870 NR1H2P55055 460 aa8.23□□□□□ -1.09
CHD8-206ENST00000553870 SH3BGRP55822 239 aaPredicted RBP8.23□□□□□ -1.09
CHD8-206ENST00000553870 VLDLRP98155 873 aa8.23□□□□□ -1.09
CHD8-206ENST00000553870 MS4A2Q01362 244 aa8.23□□□□□ -1.09
CHD8-206ENST00000553870 IL1RL1Q01638 556 aa8.23□□□□□ -1.09
CHD8-206ENST00000553870 POU3F1Q03052 451 aaPredicted RBP8.23□□□□□ -1.09
CHD8-206ENST00000553870 CHRNB3Q05901 458 aa8.23□□□□□ -1.09
CHD8-206ENST00000553870 TAF11Q15544 211 aa8.23□□□□□ -1.09
CHD8-206ENST00000553870 FAM98BQ52LJ0 330 aaKnown RBP8.23□□□□□ -1.09
CHD8-206ENST00000553870 BEX5Q5H9J7 111 aa8.23□□□□□ -1.09
CHD8-206ENST00000553870 NIPAL3Q6P499 406 aa8.23□□□□□ -1.09
CHD8-206ENST00000553870 TMPRSS11FQ6ZWK6 438 aa8.23□□□□□ -1.09
CHD8-206ENST00000553870 HDDC2Q7Z4H3 204 aa8.23□□□□□ -1.09
CHD8-206ENST00000553870 NANOGNBQ7Z5D8 188 aa8.23□□□□□ -1.09
CHD8-206ENST00000553870 AQP12AQ8IXF9 295 aa8.23□□□□□ -1.09
CHD8-206ENST00000553870 NRMQ8IXM6 262 aa8.23□□□□□ -1.09
CHD8-206ENST00000553870 LRRC17Q8N6Y2 441 aa8.23□□□□□ -1.09
CHD8-206ENST00000553870 OR6X1Q8NH79 312 aa8.23□□□□□ -1.09
CHD8-206ENST00000553870 PFN4Q8NHR9 129 aa8.23□□□□□ -1.09
CHD8-206ENST00000553870 SLC7A13Q8TCU3 470 aa8.23□□□□□ -1.09
CHD8-206ENST00000553870 S100PBPQ96BU1 408 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms