RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 C10orf53Q8N6V4 93 aa20.79■□□□□ 0.92
TDP1-205ENST00000553527 OR52N5Q8NH56 324 aa20.79■□□□□ 0.92
TDP1-205ENST00000553527 USB1Q9BQ65 265 aaKnown RBP20.79■□□□□ 0.92
TDP1-205ENST00000553527 POLR2J2Q9GZM3 115 aaKnown RBP20.79■□□□□ 0.92
TDP1-205ENST00000553527 POLR2J3Q9H1A7 115 aaKnown RBP20.79■□□□□ 0.92
TDP1-205ENST00000553527 TAS2R16Q9NYV7 291 aa20.79■□□□□ 0.92
TDP1-205ENST00000553527 RASD1Q9Y272 281 aa20.79■□□□□ 0.92
TDP1-205ENST00000553527 HEATR1Q9H583 2144 aaKnown RBP20.78■□□□□ 0.92
TDP1-205ENST00000553527 TRAV36DV7A0A075B6V5 113 aa20.78■□□□□ 0.92
TDP1-205ENST00000553527 CLOCKO15516 846 aa20.78■□□□□ 0.92
TDP1-205ENST00000553527 OR2T1O43869 369 aa20.78■□□□□ 0.92
TDP1-205ENST00000553527 KRT33AO76009 404 aa20.78■□□□□ 0.92
TDP1-205ENST00000553527 VAMP5O95183 116 aa20.78■□□□□ 0.92
TDP1-205ENST00000553527 CDH2P19022 906 aaPredicted RBP20.78■□□□□ 0.92
TDP1-205ENST00000553527 GRPRP30550 384 aa20.78■□□□□ 0.92
TDP1-205ENST00000553527 ZSCAN26Q16670 478 aa20.78■□□□□ 0.92
TDP1-205ENST00000553527 SWT1Q5T5J6 900 aaKnown RBP20.78■□□□□ 0.92
TDP1-205ENST00000553527 FAM69AQ5T7M9 428 aa20.78■□□□□ 0.92
TDP1-205ENST00000553527 ADAMTS16Q8TE57 1224 aa20.78■□□□□ 0.92
TDP1-205ENST00000553527 POP5Q969H6 163 aaKnown RBP20.78■□□□□ 0.92
TDP1-205ENST00000553527 TMEM45BQ96B21 275 aa20.78■□□□□ 0.92
TDP1-205ENST00000553527 AMBRA1Q9C0C7 1298 aa20.78■□□□□ 0.92
TDP1-205ENST00000553527 ESRP2Q9H6T0 727 aaKnown RBP20.78■□□□□ 0.92
TDP1-205ENST00000553527 F8P00451 2351 aa20.77■□□□□ 0.92
TDP1-205ENST00000553527 TCRBV5S2A0A599 114 aa20.77■□□□□ 0.92
TDP1-205ENST00000553527 TRAPPC13A5PLN9 417 aa20.77■□□□□ 0.92
TDP1-205ENST00000553527 OR5H1A6NKK0 313 aa20.77■□□□□ 0.92
TDP1-205ENST00000553527 M0R082 166 aa20.77■□□□□ 0.92
TDP1-205ENST00000553527 CIB2O75838 187 aa20.77■□□□□ 0.92
TDP1-205ENST00000553527 FOXD4Q12950 439 aaPredicted RBP20.77■□□□□ 0.92
TDP1-205ENST00000553527 TIMM23BQ5SRD1 257 aa20.77■□□□□ 0.92
TDP1-205ENST00000553527 NIPAL3Q6P499 406 aa20.77■□□□□ 0.92
TDP1-205ENST00000553527 C5orf46Q6UWT4 87 aa20.77■□□□□ 0.92
TDP1-205ENST00000553527 CYP4Z1Q86W10 505 aa20.77■□□□□ 0.92
TDP1-205ENST00000553527 EPHX4Q8IUS5 362 aa20.77■□□□□ 0.92
TDP1-205ENST00000553527 ZNF417Q8TAU3 575 aa20.77■□□□□ 0.92
TDP1-205ENST00000553527 MBD6Q96DN6 1003 aa20.77■□□□□ 0.92
TDP1-205ENST00000553527 PRRC1Q96M27 445 aa20.77■□□□□ 0.92
TDP1-205ENST00000553527 ZNF587Q96SQ5 575 aaPredicted RBP20.77■□□□□ 0.92
TDP1-205ENST00000553527 MALT1Q9UDY8 824 aa20.77■□□□□ 0.92
TDP1-205ENST00000553527 RAI1Q7Z5J4 1906 aaPredicted RBP20.76■□□□□ 0.91
TDP1-205ENST00000553527 AQP12BA6NM10 295 aa20.76■□□□□ 0.91
TDP1-205ENST00000553527 CHP2O43745 196 aa20.76■□□□□ 0.91
TDP1-205ENST00000553527 OR5F1O95221 314 aa20.76■□□□□ 0.91
TDP1-205ENST00000553527 CD3EP07766 207 aa20.76■□□□□ 0.91
TDP1-205ENST00000553527 ITGA5P08648 1049 aa20.76■□□□□ 0.91
TDP1-205ENST00000553527 NQO1P15559 274 aaKnown RBP20.76■□□□□ 0.91
TDP1-205ENST00000553527 ZNF43P17038 809 aa20.76■□□□□ 0.91
TDP1-205ENST00000553527 IFNA8P32881 189 aa20.76■□□□□ 0.91
TDP1-205ENST00000553527 SELENOPP49908 381 aa20.76■□□□□ 0.91
TDP1-205ENST00000553527 CLDN17P56750 224 aa20.76■□□□□ 0.91
TDP1-205ENST00000553527 LGALS3BPQ08380 585 aa20.76■□□□□ 0.91
TDP1-205ENST00000553527 C1DQ13901 141 aaKnown RBP20.76■□□□□ 0.91
TDP1-205ENST00000553527 NCMAPQ5T1S8 102 aa20.76■□□□□ 0.91
TDP1-205ENST00000553527 C1orf146Q5VVC0 180 aa20.76■□□□□ 0.91
TDP1-205ENST00000553527 TSPYL5Q86VY4 417 aaPredicted RBP20.76■□□□□ 0.91
TDP1-205ENST00000553527 SPATA24Q86W54 205 aa20.76■□□□□ 0.91
TDP1-205ENST00000553527 AQP12AQ8IXF9 295 aa20.76■□□□□ 0.91
TDP1-205ENST00000553527 AKAP1Q92667 903 aaKnown RBP eCLIP20.76■□□□□ 0.91
TDP1-205ENST00000553527 SLC41A3Q96GZ6 507 aa20.76■□□□□ 0.91
TDP1-205ENST00000553527 ALPK1Q96QP1 1244 aa20.76■□□□□ 0.91
TDP1-205ENST00000553527 SEPHS2Q99611 448 aa20.76■□□□□ 0.91
TDP1-205ENST00000553527 EPYCQ99645 322 aa20.76■□□□□ 0.91
TDP1-205ENST00000553527 CCL19Q99731 98 aa20.76■□□□□ 0.91
TDP1-205ENST00000553527 C1QTNF6Q9BXI9 259 aa20.76■□□□□ 0.91
TDP1-205ENST00000553527 CXXC4Q9H2H0 198 aa20.76■□□□□ 0.91
TDP1-205ENST00000553527 SLCO5A1Q9H2Y9 848 aa20.76■□□□□ 0.91
TDP1-205ENST00000553527 ENPP4Q9Y6X5 453 aa20.76■□□□□ 0.91
TDP1-205ENST00000553527 CADP27708 2225 aa20.76■□□□□ 0.91
TDP1-205ENST00000553527 DPRXA6NFQ7 191 aa20.75■□□□□ 0.91
TDP1-205ENST00000553527 LRRN3E7EW58 273 aa20.75■□□□□ 0.91
TDP1-205ENST00000553527 hCG_2039718K7EN88 272 aa20.75■□□□□ 0.91
TDP1-205ENST00000553527 SEMG1P04279 462 aa20.75■□□□□ 0.91
TDP1-205ENST00000553527 YAP1P46937 504 aaKnown RBP20.75■□□□□ 0.91
TDP1-205ENST00000553527 LTBQ06643 244 aa20.75■□□□□ 0.91
TDP1-205ENST00000553527 BSPH1Q075Z2 132 aa20.75■□□□□ 0.91
TDP1-205ENST00000553527 PIN1Q13526 163 aaPredicted RBP20.75■□□□□ 0.91
TDP1-205ENST00000553527 GABRA6Q16445 453 aa20.75■□□□□ 0.91
TDP1-205ENST00000553527 H1FNTQ75WM6 255 aaPredicted RBP20.75■□□□□ 0.91
TDP1-205ENST00000553527 P2RY8Q86VZ1 359 aa20.75■□□□□ 0.91
TDP1-205ENST00000553527 OXGR1Q96P68 337 aa20.75■□□□□ 0.91
TDP1-205ENST00000553527 SLC7A7Q9UM01 511 aa20.75■□□□□ 0.91
TDP1-205ENST00000553527 FAM32AQ9Y421 112 aaKnown RBP20.75■□□□□ 0.91
TDP1-205ENST00000553527 RNF115Q9Y4L5 304 aa20.75■□□□□ 0.91
TDP1-205ENST00000553527 ITPR3Q14573 2671 aa20.75■□□□□ 0.91
TDP1-205ENST00000553527 TEP1Q99973 2627 aaKnown RBP20.74■□□□□ 0.91
TDP1-205ENST00000553527 HIVEP1P15822 2718 aa20.74■□□□□ 0.91
TDP1-205ENST00000553527 FABP3P05413 133 aa20.74■□□□□ 0.91
TDP1-205ENST00000553527 ITGA2P17301 1181 aa20.74■□□□□ 0.91
TDP1-205ENST00000553527 VLDLRP98155 873 aa20.74■□□□□ 0.91
TDP1-205ENST00000553527 FAM98BQ52LJ0 330 aaKnown RBP20.74■□□□□ 0.91
TDP1-205ENST00000553527 OR7E24Q6IFN5 339 aa20.74■□□□□ 0.91
TDP1-205ENST00000553527 POMGNT2Q8NAT1 580 aa20.74■□□□□ 0.91
TDP1-205ENST00000553527 NEUROG1Q92886 237 aa20.74■□□□□ 0.91
TDP1-205ENST00000553527 PIGTQ969N2 578 aa20.74■□□□□ 0.91
TDP1-205ENST00000553527 UTP4Q969X6 686 aaKnown RBP20.74■□□□□ 0.91
TDP1-205ENST00000553527 C7orf34Q96L11 122 aa20.74■□□□□ 0.91
TDP1-205ENST00000553527 MUS81Q96NY9 551 aa20.74■□□□□ 0.91
TDP1-205ENST00000553527 MOGAT1Q96PD6 335 aa20.74■□□□□ 0.91
TDP1-205ENST00000553527 ASPNQ9BXN1 380 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms