RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 TRILQ7L0X0 811 aa6.62□□□□□ -1.35
ATXN3-221ENST00000553498 NDUFAF7Q7L592 441 aa6.62□□□□□ -1.35
ATXN3-221ENST00000553498 FAM122BQ7Z309 247 aa6.62□□□□□ -1.35
ATXN3-221ENST00000553498 LHFPL3Q86UP9 236 aa6.62□□□□□ -1.35
ATXN3-221ENST00000553498 TPRA1Q86W33 373 aa6.62□□□□□ -1.35
ATXN3-221ENST00000553498 PRR22Q8IZ63 422 aa6.62□□□□□ -1.35
ATXN3-221ENST00000553498 MFSD4AQ8N468 514 aa6.62□□□□□ -1.35
ATXN3-221ENST00000553498 ARIH2OSQ8N7S6 290 aa6.62□□□□□ -1.35
ATXN3-221ENST00000553498 TEX19Q8NA77 164 aa6.62□□□□□ -1.35
ATXN3-221ENST00000553498 LRRC75AQ8NAA5 344 aa6.62□□□□□ -1.35
ATXN3-221ENST00000553498 ZNF248Q8NDW4 579 aa6.62□□□□□ -1.35
ATXN3-221ENST00000553498 ADPRHL1Q8NDY3 354 aa6.62□□□□□ -1.35
ATXN3-221ENST00000553498 ATP6V1C2Q8NEY4 427 aa6.62□□□□□ -1.35
ATXN3-221ENST00000553498 BBS1Q8NFJ9 593 aa6.62□□□□□ -1.35
ATXN3-221ENST00000553498 OR5J2Q8NH18 312 aa6.62□□□□□ -1.35
ATXN3-221ENST00000553498 MFSD8Q8NHS3 518 aa6.62□□□□□ -1.35
ATXN3-221ENST00000553498 DUSP19Q8WTR2 217 aa6.62□□□□□ -1.35
ATXN3-221ENST00000553498 SLC25A43Q8WUT9 341 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-221ENST00000553498 SPRYD4Q8WW59 207 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-221ENST00000553498 ACOT12Q8WYK0 555 aa6.62□□□□□ -1.35
ATXN3-221ENST00000553498 SMPDL3BQ92485 455 aa6.62□□□□□ -1.35
ATXN3-221ENST00000553498 THRSPQ92748 146 aa6.62□□□□□ -1.35
ATXN3-221ENST00000553498 MR1Q95460 341 aa6.62□□□□□ -1.35
ATXN3-221ENST00000553498 DDIT4LQ96D03 193 aa6.62□□□□□ -1.35
ATXN3-221ENST00000553498 C1GALT1C1Q96EU7 318 aa6.62□□□□□ -1.35
ATXN3-221ENST00000553498 LIN37Q96GY3 246 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-221ENST00000553498 IMMP1LQ96LU5 166 aa6.62□□□□□ -1.35
ATXN3-221ENST00000553498 FRMD6Q96NE9 622 aa6.62□□□□□ -1.35
ATXN3-221ENST00000553498 TAAR9Q96RI9 348 aa6.62□□□□□ -1.35
ATXN3-221ENST00000553498 CCDC32Q9BV29 185 aa6.62□□□□□ -1.35
ATXN3-221ENST00000553498 KATNB1Q9BVA0 655 aa6.62□□□□□ -1.35
ATXN3-221ENST00000553498 POTEKPQ9BYX7 375 aa6.62□□□□□ -1.35
ATXN3-221ENST00000553498 OR51V1Q9H2C8 321 aa6.62□□□□□ -1.35
ATXN3-221ENST00000553498 ARRDC1-AS1Q9H2J1 176 aa6.62□□□□□ -1.35
ATXN3-221ENST00000553498 PTGES2Q9H7Z7 377 aa6.62□□□□□ -1.35
ATXN3-221ENST00000553498 APMAPQ9HDC9 416 aa6.62□□□□□ -1.35
ATXN3-221ENST00000553498 FANCFQ9NPI8 374 aa6.62□□□□□ -1.35
ATXN3-221ENST00000553498 SERINC1Q9NRX5 453 aa6.62□□□□□ -1.35
ATXN3-221ENST00000553498 TBCCD1Q9NVR7 557 aa6.62□□□□□ -1.35
ATXN3-221ENST00000553498 MRPL39Q9NYK5 338 aaKnown RBP6.62□□□□□ -1.35
ATXN3-221ENST00000553498 PADI1Q9ULC6 663 aa6.62□□□□□ -1.35
ATXN3-221ENST00000553498 YARS2Q9Y2Z4 477 aaKnown RBP6.62□□□□□ -1.35
ATXN3-221ENST00000553498 B3GALT1Q9Y5Z6 326 aa6.62□□□□□ -1.35
ATXN3-221ENST00000553498 PMF1-BGLAPU3KQ54 211 aa6.62□□□□□ -1.35
ATXN3-221ENST00000553498 HEATR5BQ9P2D3 2071 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 FANCMQ8IYD8 2048 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 IGHV3-20A0A0C4DH32 117 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 ANKRD61A6NGH8 418 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 TMEM200CA6NKL6 621 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 BLOC1S5-TXNDC5H3BN57 136 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 ADAM10O14672 748 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 SCO2O43819 266 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 GPRIN2O60269 458 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 FOXD2O60548 495 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-221ENST00000553498 KLF7O75840 302 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-221ENST00000553498 ZNF806P0C7X5 589 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 PRKCAP17252 672 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 CELP19835 753 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 PTBP1P26599 531 aaKnown RBP eCLIP6.61□□□□□ -1.354e-18■■■■■ 40.6
ATXN3-221ENST00000553498 AQP2P41181 271 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 TGM4P49221 684 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 DAP3P51398 398 aaKnown RBP6.61□□□□□ -1.35
ATXN3-221ENST00000553498 ZNF41P51814 821 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-221ENST00000553498 GBX2P52951 348 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-221ENST00000553498 SLC16A1P53985 500 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 FBXW4P57775 412 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 CTXN1P60606 82 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 RPS3AP61247 264 aaKnown RBP6.61□□□□□ -1.35
ATXN3-221ENST00000553498 ERVK-25P63136 954 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 RPL18Q07020 188 aaKnown RBP6.61□□□□□ -1.35
ATXN3-221ENST00000553498 ATP1A4Q13733 1029 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 COL9A2Q14055 689 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-221ENST00000553498 PCOLCEQ15113 449 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 COL28A1Q2UY09 1125 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 ZNF791Q3KP31 576 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-221ENST00000553498 TBC1D25Q3MII6 688 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 CDONQ4KMG0 1287 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 RPL22L1Q6P5R6 122 aaKnown RBP6.61□□□□□ -1.35
ATXN3-221ENST00000553498 PAQR6Q6TCH4 344 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 FAM198BQ6UWH4 519 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 C6orf15Q6UXA7 325 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-221ENST00000553498 PLEKHG7Q6ZR37 379 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 SHISA6Q6ZSJ9 500 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 SLC16A9Q7RTY1 509 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 HDDC2Q7Z4H3 204 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 ADGRG3Q86Y34 549 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 KLBQ86Z14 1044 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 LRRC17Q8N6Y2 441 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 SDR9C7Q8NEX9 313 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 OR10H4Q8NGA5 316 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 OR4K13Q8NH42 304 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 MOSPD2Q8NHP6 518 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 CHPT1Q8WUD6 406 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 TAAR8Q969N4 342 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 ZBTB8AQ96BR9 441 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 SPACA9Q96E40 222 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-221ENST00000553498 KTI12Q96EK9 354 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-221ENST00000553498 SGCZQ96LD1 299 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 CEP19Q96LK0 163 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 DEPDC7Q96QD5 511 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms