RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 OR7A10O76100 309 aa12.46□□□□□ -0.41
PTCH1-226ENST00000553011 H1F0P07305 194 aaKnown RBP12.46□□□□□ -0.41
PTCH1-226ENST00000553011 ASAH2BP0C7U1 165 aa12.46□□□□□ -0.41
PTCH1-226ENST00000553011 EPXP11678 715 aa12.46□□□□□ -0.41
PTCH1-226ENST00000553011 IFI30P13284 250 aa12.46□□□□□ -0.41
PTCH1-226ENST00000553011 RHCEP18577 417 aa12.46□□□□□ -0.41
PTCH1-226ENST00000553011 FUT1P19526 365 aa12.46□□□□□ -0.41
PTCH1-226ENST00000553011 AHCYP23526 432 aa12.46□□□□□ -0.41
PTCH1-226ENST00000553011 POU3F1Q03052 451 aaPredicted RBP12.46□□□□□ -0.41
PTCH1-226ENST00000553011 LGALS3BPQ08380 585 aa12.46□□□□□ -0.41
PTCH1-226ENST00000553011 FAPQ12884 760 aa12.46□□□□□ -0.41
PTCH1-226ENST00000553011 P2RY6Q15077 328 aa12.46□□□□□ -0.41
PTCH1-226ENST00000553011 MTX3Q5HYI7 312 aa12.46□□□□□ -0.41
PTCH1-226ENST00000553011 NIPAL3Q6P499 406 aa12.46□□□□□ -0.41
PTCH1-226ENST00000553011 PGM2L1Q6PCE3 622 aa12.46□□□□□ -0.41
PTCH1-226ENST00000553011 UEVLDQ8IX04 471 aa12.46□□□□□ -0.41
PTCH1-226ENST00000553011 NRMQ8IXM6 262 aa12.46□□□□□ -0.41
PTCH1-226ENST00000553011 ACOT11Q8WXI4 607 aaPredicted RBP12.46□□□□□ -0.41
PTCH1-226ENST00000553011 ASB9Q96DX5 294 aa12.46□□□□□ -0.41
PTCH1-226ENST00000553011 C14orf79Q96F83 325 aa12.46□□□□□ -0.41
PTCH1-226ENST00000553011 ZC3HAV1LQ96H79 300 aaKnown RBP12.46□□□□□ -0.41
PTCH1-226ENST00000553011 DACH2Q96NX9 599 aa12.46□□□□□ -0.41
PTCH1-226ENST00000553011 SEPHS2Q99611 448 aa12.46□□□□□ -0.41
PTCH1-226ENST00000553011 PIP5K1AQ99755 562 aa12.46□□□□□ -0.41
PTCH1-226ENST00000553011 MED18Q9BUE0 208 aa12.46□□□□□ -0.41
PTCH1-226ENST00000553011 ACTR6Q9GZN1 396 aa12.46□□□□□ -0.41
PTCH1-226ENST00000553011 SLCO5A1Q9H2Y9 848 aa12.46□□□□□ -0.41
PTCH1-226ENST00000553011 MALT1Q9UDY8 824 aa12.46□□□□□ -0.41
PTCH1-226ENST00000553011 NDRG3Q9UGV2 375 aa12.46□□□□□ -0.41
PTCH1-226ENST00000553011 GPR52Q9Y2T5 361 aa12.46□□□□□ -0.41
PTCH1-226ENST00000553011 ACOT8O14734 319 aa12.45□□□□□ -0.42
PTCH1-226ENST00000553011 DNAJC8O75937 253 aaPredicted RBP12.45□□□□□ -0.42
PTCH1-226ENST00000553011 ZNF432O94892 652 aa12.45□□□□□ -0.42
PTCH1-226ENST00000553011 OR6A2O95222 327 aa12.45□□□□□ -0.42
PTCH1-226ENST00000553011 CNOT4O95628 575 aaKnown RBP12.45□□□□□ -0.42
PTCH1-226ENST00000553011 IGF2P01344 180 aa12.45□□□□□ -0.42
PTCH1-226ENST00000553011 HIST1H2ABP04908 130 aa12.45□□□□□ -0.42
PTCH1-226ENST00000553011 FABP3P05413 133 aa12.45□□□□□ -0.42
PTCH1-226ENST00000553011 THBDP07204 575 aa12.45□□□□□ -0.42
PTCH1-226ENST00000553011 COX5AP20674 150 aa12.45□□□□□ -0.42
PTCH1-226ENST00000553011 IL32P24001 234 aa12.45□□□□□ -0.42
PTCH1-226ENST00000553011 SSTR2P30874 369 aa12.45□□□□□ -0.42
PTCH1-226ENST00000553011 ITGADQ13349 1161 aa12.45□□□□□ -0.42
PTCH1-226ENST00000553011 FGD3Q5JSP0 725 aa12.45□□□□□ -0.42
PTCH1-226ENST00000553011 C9orf135Q5VTT2 229 aa12.45□□□□□ -0.42
PTCH1-226ENST00000553011 PODNL1Q6PEZ8 512 aa12.45□□□□□ -0.42
PTCH1-226ENST00000553011 NHLRC1Q6VVB1 395 aa12.45□□□□□ -0.42
PTCH1-226ENST00000553011 ZNF730Q6ZMV8 503 aa12.45□□□□□ -0.42
PTCH1-226ENST00000553011 HIST3H2AQ7L7L0 130 aa12.45□□□□□ -0.42
PTCH1-226ENST00000553011 BHLHA15Q7RTS1 189 aaPredicted RBP12.45□□□□□ -0.42
PTCH1-226ENST00000553011 NANOGNBQ7Z5D8 188 aa12.45□□□□□ -0.42
PTCH1-226ENST00000553011 ZDHHC21Q8IVQ6 265 aa12.45□□□□□ -0.42
PTCH1-226ENST00000553011 WDFY1Q8IWB7 410 aa12.45□□□□□ -0.42
PTCH1-226ENST00000553011 ZNF433Q8N7K0 673 aaPredicted RBP12.45□□□□□ -0.42
PTCH1-226ENST00000553011 OR52J3Q8NH60 311 aa12.45□□□□□ -0.42
PTCH1-226ENST00000553011 SLC7A13Q8TCU3 470 aa12.45□□□□□ -0.42
PTCH1-226ENST00000553011 HIST1H2ACQ93077 130 aa12.45□□□□□ -0.42
PTCH1-226ENST00000553011 KISS1RQ969F8 398 aaPredicted RBP12.45□□□□□ -0.42
PTCH1-226ENST00000553011 MCUR1Q96AQ8 359 aa12.45□□□□□ -0.42
PTCH1-226ENST00000553011 S100PBPQ96BU1 408 aa12.45□□□□□ -0.42
PTCH1-226ENST00000553011 BPIFA2Q96DR5 249 aa12.45□□□□□ -0.42
PTCH1-226ENST00000553011 TXNDC15Q96J42 360 aa12.45□□□□□ -0.42
PTCH1-226ENST00000553011 DHRS1Q96LJ7 313 aa12.45□□□□□ -0.42
PTCH1-226ENST00000553011 CADM1Q9BY67 442 aaKnown RBP12.45□□□□□ -0.42
PTCH1-226ENST00000553011 ASB6Q9NWX5 421 aa12.45□□□□□ -0.42
PTCH1-226ENST00000553011 MED29Q9NX70 200 aa12.45□□□□□ -0.42
PTCH1-226ENST00000553011 TAS2R5Q9NYW4 299 aa12.45□□□□□ -0.42
PTCH1-226ENST00000553011 UPB1Q9UBR1 384 aa12.45□□□□□ -0.42
PTCH1-226ENST00000553011 TRBV4-1A0A0J9YWV2 114 aa12.44□□□□□ -0.42
PTCH1-226ENST00000553011 A0A1W2PRQ8 180 aa12.44□□□□□ -0.42
PTCH1-226ENST00000553011 A6NNC1 897 aa12.44□□□□□ -0.42
PTCH1-226ENST00000553011 BLOC1S5-TXNDC5H3BN57 136 aa12.44□□□□□ -0.42
PTCH1-226ENST00000553011 PDLIM1O00151 329 aa12.44□□□□□ -0.42
PTCH1-226ENST00000553011 GSC2O15499 205 aa12.44□□□□□ -0.42
PTCH1-226ENST00000553011 RNF13O43567 381 aa12.44□□□□□ -0.42
PTCH1-226ENST00000553011 UPK3AO75631 287 aa12.44□□□□□ -0.42
PTCH1-226ENST00000553011 ITGA5P08648 1049 aa12.44□□□□□ -0.42
PTCH1-226ENST00000553011 ITGA2P17301 1181 aa12.44□□□□□ -0.42
PTCH1-226ENST00000553011 MAKP20794 623 aa12.44□□□□□ -0.42
PTCH1-226ENST00000553011 DNAJA1P31689 397 aaKnown RBP12.44□□□□□ -0.42
PTCH1-226ENST00000553011 KRTAP10-9P60411 292 aa12.44□□□□□ -0.42
PTCH1-226ENST00000553011 CBX1P83916 185 aa12.44□□□□□ -0.42
PTCH1-226ENST00000553011 SPIBQ01892 262 aa12.44□□□□□ -0.42
PTCH1-226ENST00000553011 PRKCDQ05655 676 aa12.44□□□□□ -0.42
PTCH1-226ENST00000553011 ZP4Q12836 540 aa12.44□□□□□ -0.42
PTCH1-226ENST00000553011 TRAP1Q12931 704 aaKnown RBP12.44□□□□□ -0.42
PTCH1-226ENST00000553011 DGCR6Q14129 220 aa12.44□□□□□ -0.42
PTCH1-226ENST00000553011 DAZAP2Q15038 168 aaPredicted RBP12.44□□□□□ -0.42
PTCH1-226ENST00000553011 MBOAT2Q6ZWT7 520 aa12.44□□□□□ -0.42
PTCH1-226ENST00000553011 PXKQ7Z7A4 578 aa12.44□□□□□ -0.42
PTCH1-226ENST00000553011 POMGNT2Q8NAT1 580 aa12.44□□□□□ -0.42
PTCH1-226ENST00000553011 STEAP2Q8NFT2 490 aa12.44□□□□□ -0.42
PTCH1-226ENST00000553011 LRGUKQ96M69 825 aa12.44□□□□□ -0.42
PTCH1-226ENST00000553011 EMC6Q9BV81 110 aa12.44□□□□□ -0.42
PTCH1-226ENST00000553011 HDHD5Q9BXW7 423 aa12.44□□□□□ -0.42
PTCH1-226ENST00000553011 ANKRD19PQ9H560 264 aa12.44□□□□□ -0.42
PTCH1-226ENST00000553011 IL1RAPQ9NPH3 570 aa12.44□□□□□ -0.42
PTCH1-226ENST00000553011 RCE1Q9Y256 329 aa12.44□□□□□ -0.42
PTCH1-226ENST00000553011 NOX1Q9Y5S8 564 aa12.44□□□□□ -0.42
PTCH1-226ENST00000553011 SLC35F4A4IF30 521 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms