RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 DENND2DQ9H6A0 471 aaPredicted RBP9.11□□□□□ -0.95
TRAFD1-208ENST00000552890 C12orf49Q9H741 205 aa9.11□□□□□ -0.95
TRAFD1-208ENST00000552890 NDUFAF4Q9P032 175 aa9.11□□□□□ -0.95
TRAFD1-208ENST00000552890 FBXL3Q9UKT7 428 aa9.11□□□□□ -0.95
TRAFD1-208ENST00000552890 CLEC4AQ9UMR7 237 aa9.11□□□□□ -0.95
TRAFD1-208ENST00000552890 AURKCQ9UQB9 309 aa9.11□□□□□ -0.95
TRAFD1-208ENST00000552890 A6NIZ1 184 aa9.1□□□□□ -0.95
TRAFD1-208ENST00000552890 ENO4A6NNW6 628 aa9.1□□□□□ -0.95
TRAFD1-208ENST00000552890 MCIDASD6RGH6 385 aa9.1□□□□□ -0.95
TRAFD1-208ENST00000552890 OR7A10O76100 309 aa9.1□□□□□ -0.95
TRAFD1-208ENST00000552890 BCL10O95999 233 aa9.1□□□□□ -0.95
TRAFD1-208ENST00000552890 ASAH2BP0C7U1 165 aa9.1□□□□□ -0.95
TRAFD1-208ENST00000552890 RAP1BP61224 184 aa9.1□□□□□ -0.95
TRAFD1-208ENST00000552890 RAP1AP62834 184 aa9.1□□□□□ -0.95
TRAFD1-208ENST00000552890 PRKCDQ05655 676 aa9.1□□□□□ -0.95
TRAFD1-208ENST00000552890 EXOC3L2Q2M3D2 409 aa9.1□□□□□ -0.95
TRAFD1-208ENST00000552890 FGD3Q5JSP0 725 aa9.1□□□□□ -0.95
TRAFD1-208ENST00000552890 ZNF474Q6S9Z5 364 aaPredicted RBP9.1□□□□□ -0.95
TRAFD1-208ENST00000552890 TMPRSS11FQ6ZWK6 438 aa9.1□□□□□ -0.95
TRAFD1-208ENST00000552890 BHLHA15Q7RTS1 189 aaPredicted RBP9.1□□□□□ -0.95
TRAFD1-208ENST00000552890 OAFQ86UD1 273 aa9.1□□□□□ -0.95
TRAFD1-208ENST00000552890 COMTD1Q86VU5 262 aa9.1□□□□□ -0.95
TRAFD1-208ENST00000552890 RBM45Q8IUH3 476 aaKnown RBP9.1□□□□□ -0.95
TRAFD1-208ENST00000552890 CCDC103Q8IW40 242 aa9.1□□□□□ -0.95
TRAFD1-208ENST00000552890 GABRG1Q8N1C3 465 aa9.1□□□□□ -0.95
TRAFD1-208ENST00000552890 OR6X1Q8NH79 312 aa9.1□□□□□ -0.95
TRAFD1-208ENST00000552890 BOD1Q96IK1 185 aa9.1□□□□□ -0.95
TRAFD1-208ENST00000552890 DHRS1Q96LJ7 313 aa9.1□□□□□ -0.95
TRAFD1-208ENST00000552890 OPN3Q9H1Y3 402 aaPredicted RBP9.1□□□□□ -0.95
TRAFD1-208ENST00000552890 NPDC1Q9NQX5 325 aaPredicted RBP9.1□□□□□ -0.95
TRAFD1-208ENST00000552890 USP22Q9UPT9 525 aa9.1□□□□□ -0.95
TRAFD1-208ENST00000552890 MGAT4BQ9UQ53 548 aa9.1□□□□□ -0.95
TRAFD1-208ENST00000552890 AMDHD2Q9Y303 409 aa9.1□□□□□ -0.95
TRAFD1-208ENST00000552890 UNC79Q9P2D8 2635 aa9.1□□□□□ -0.95
TRAFD1-208ENST00000552890 MPDZO75970 2070 aa9.09□□□□□ -0.95
TRAFD1-208ENST00000552890 DHRS12A0PJE2 317 aa9.09□□□□□ -0.95
TRAFD1-208ENST00000552890 EFCAB9A8MZ26 197 aa9.09□□□□□ -0.95
TRAFD1-208ENST00000552890 KDM4EB2RXH2 506 aaPredicted RBP9.09□□□□□ -0.95
TRAFD1-208ENST00000552890 BLOC1S5-TXNDC5H3BN57 136 aa9.09□□□□□ -0.95
TRAFD1-208ENST00000552890 RPL36A-HNRNPH2H7BZ11 118 aa9.09□□□□□ -0.95
TRAFD1-208ENST00000552890 GNGT2O14610 69 aa9.09□□□□□ -0.95
TRAFD1-208ENST00000552890 GSC2O15499 205 aa9.09□□□□□ -0.95
TRAFD1-208ENST00000552890 TMCC2O75069 709 aa9.09□□□□□ -0.95
TRAFD1-208ENST00000552890 ADAP00813 363 aa9.09□□□□□ -0.95
TRAFD1-208ENST00000552890 IGHG1P01857 330 aa9.09□□□□□ -0.95
TRAFD1-208ENST00000552890 RNF224P0DH78 156 aa9.09□□□□□ -0.95
TRAFD1-208ENST00000552890 FCGR1AP12314 374 aa9.09□□□□□ -0.95
TRAFD1-208ENST00000552890 IFI30P13284 250 aa9.09□□□□□ -0.95
TRAFD1-208ENST00000552890 COX5AP20674 150 aa9.09□□□□□ -0.95
TRAFD1-208ENST00000552890 MAGEA2P43356 314 aa9.09□□□□□ -0.95
TRAFD1-208ENST00000552890 HMGA2P52926 109 aa9.09□□□□□ -0.95
TRAFD1-208ENST00000552890 SPIBQ01892 262 aa9.09□□□□□ -0.95
TRAFD1-208ENST00000552890 NRN1LQ496H8 165 aa9.09□□□□□ -0.95
TRAFD1-208ENST00000552890 BEX5Q5H9J7 111 aa9.09□□□□□ -0.95
TRAFD1-208ENST00000552890 GPR139Q6DWJ6 353 aa9.09□□□□□ -0.95
TRAFD1-208ENST00000552890 NIPAL3Q6P499 406 aa9.09□□□□□ -0.95
TRAFD1-208ENST00000552890 PGM2L1Q6PCE3 622 aa9.09□□□□□ -0.95
TRAFD1-208ENST00000552890 STAC2Q6ZMT1 411 aa9.09□□□□□ -0.95
TRAFD1-208ENST00000552890 NUFIP2Q7Z417 695 aaKnown RBP9.09□□□□□ -0.95
TRAFD1-208ENST00000552890 DEPDC4Q8N2C3 294 aa9.09□□□□□ -0.95
TRAFD1-208ENST00000552890 IL17RDQ8NFM7 739 aa9.09□□□□□ -0.95
TRAFD1-208ENST00000552890 OR4D11Q8NGI4 311 aa9.09□□□□□ -0.95
TRAFD1-208ENST00000552890 OR6N1Q8NGY5 312 aa9.09□□□□□ -0.95
TRAFD1-208ENST00000552890 MAGEE2Q8TD90 523 aaPredicted RBP9.09□□□□□ -0.95
TRAFD1-208ENST00000552890 TMEM255BQ8WV15 326 aa9.09□□□□□ -0.95
TRAFD1-208ENST00000552890 DNAJC9Q8WXX5 260 aa9.09□□□□□ -0.95
TRAFD1-208ENST00000552890 NANOS1Q8WY41 292 aaKnown RBP9.09□□□□□ -0.95
TRAFD1-208ENST00000552890 ZNF566Q969W8 418 aa9.09□□□□□ -0.95
TRAFD1-208ENST00000552890 CCDC124Q96CT7 223 aaKnown RBP9.09□□□□□ -0.95
TRAFD1-208ENST00000552890 SLC25A44Q96H78 314 aaPredicted RBP9.09□□□□□ -0.95
TRAFD1-208ENST00000552890 RAB3IPQ96QF0 476 aaPredicted RBP9.09□□□□□ -0.95
TRAFD1-208ENST00000552890 PRSS27Q9BQR3 290 aa9.09□□□□□ -0.95
TRAFD1-208ENST00000552890 PRR14Q9BWN1 585 aa9.09□□□□□ -0.95
TRAFD1-208ENST00000552890 TEX12Q9BXU0 123 aa9.09□□□□□ -0.95
TRAFD1-208ENST00000552890 ACTR6Q9GZN1 396 aa9.09□□□□□ -0.95
TRAFD1-208ENST00000552890 LRMDAQ9H2I8 198 aa9.09□□□□□ -0.95
TRAFD1-208ENST00000552890 ESRP2Q9H6T0 727 aaKnown RBP9.09□□□□□ -0.95
TRAFD1-208ENST00000552890 REEP1Q9H902 201 aa9.09□□□□□ -0.95
TRAFD1-208ENST00000552890 INIPQ9NRY2 104 aa9.09□□□□□ -0.95
TRAFD1-208ENST00000552890 ING1Q9UK53 422 aaPredicted RBP9.09□□□□□ -0.95
TRAFD1-208ENST00000552890 HIF3AQ9Y2N7 669 aa9.09□□□□□ -0.95
TRAFD1-208ENST00000552890 NOTCH2Q04721 2471 aa9.09□□□□□ -0.95
TRAFD1-208ENST00000552890 SH3PXD2BA1X283 911 aa9.08□□□□□ -0.96
TRAFD1-208ENST00000552890 A6NNC1 897 aa9.08□□□□□ -0.96
TRAFD1-208ENST00000552890 VSTM5A8MXK1 200 aa9.08□□□□□ -0.96
TRAFD1-208ENST00000552890 KPNA4O00629 521 aaPredicted RBP9.08□□□□□ -0.96
TRAFD1-208ENST00000552890 XKRYO14609 159 aa9.08□□□□□ -0.96
TRAFD1-208ENST00000552890 IDH3BO43837 385 aa9.08□□□□□ -0.96
TRAFD1-208ENST00000552890 LYPD3O95274 346 aa9.08□□□□□ -0.96
TRAFD1-208ENST00000552890 FARS2O95363 451 aaKnown RBP9.08□□□□□ -0.96
TRAFD1-208ENST00000552890 TNFRSF1BP20333 461 aa9.08□□□□□ -0.96
TRAFD1-208ENST00000552890 GSTM3P21266 225 aa9.08□□□□□ -0.96
TRAFD1-208ENST00000552890 P2RY4P51582 365 aa9.08□□□□□ -0.96
TRAFD1-208ENST00000552890 CLDN17P56750 224 aa9.08□□□□□ -0.96
TRAFD1-208ENST00000552890 UBE2NP61088 152 aaKnown RBP9.08□□□□□ -0.96
TRAFD1-208ENST00000552890 POU3F1Q03052 451 aaPredicted RBP9.08□□□□□ -0.96
TRAFD1-208ENST00000552890 FAM27E3Q08E93 113 aa9.08□□□□□ -0.96
TRAFD1-208ENST00000552890 FAPQ12884 760 aa9.08□□□□□ -0.96
TRAFD1-208ENST00000552890 COX10Q12887 443 aa9.08□□□□□ -0.96
TRAFD1-208ENST00000552890 C3orf36Q3SXR2 165 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms