RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 FAM47E-STBD1D6RA91 191 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 ARHGEF9O43307 516 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 GSTZ1O43708 216 aaPredicted RBP8.13□□□□□ -1.11
TMEM116-209ENST00000550020 SELENOFO60613 162 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 SNRNP200O75643 2136 aaKnown RBP8.13□□□□□ -1.11
TMEM116-209ENST00000550020 SERPINI2O75830 405 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 ECDO95905 644 aaPredicted RBP8.13□□□□□ -1.11
TMEM116-209ENST00000550020 IGHMP01871 453 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 BGLAPP02818 100 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 HEXBP07686 556 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 YES1P07947 543 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 RAB40ALP0C0E4 278 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 CALCBP10092 127 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 SRMP19623 302 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 AHCYP23526 432 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 ABCD3P28288 659 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 MSX1P28360 303 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 CRABP1P29762 137 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 THBS2P35442 1172 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 APOBEC1P41238 236 aaKnown RBP8.13□□□□□ -1.11
TMEM116-209ENST00000550020 CDKN2AP42771 156 aaKnown RBP8.13□□□□□ -1.11
TMEM116-209ENST00000550020 MMP15P51511 669 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 SRSF5Q13243 272 aaKnown RBP8.13□□□□□ -1.11
TMEM116-209ENST00000550020 ALKBH1Q13686 389 aaKnown RBP8.13□□□□□ -1.11
TMEM116-209ENST00000550020 COL9A2Q14055 689 aaPredicted RBP8.13□□□□□ -1.11
TMEM116-209ENST00000550020 INSL4Q14641 139 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 CCDC85BQ15834 202 aaPredicted RBP8.13□□□□□ -1.11
TMEM116-209ENST00000550020 CARTPTQ16568 116 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 TBRG1Q3YBR2 411 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 Q499Y3 187 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 ATAD3CQ5T2N8 411 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 LINC01590Q5TEZ4 76 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 EEF1A1P5Q5VTE0 462 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 KCTD18Q6PI47 426 aaPredicted RBP8.13□□□□□ -1.11
TMEM116-209ENST00000550020 CBLN3Q6UW01 205 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 CHRDL2Q6WN34 429 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 RPTNQ6XPR3 784 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 SSX6Q7RTT6 188 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 MARCH3Q86UD3 253 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 CDC20BQ86Y33 519 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 C9orf40Q8IXQ3 194 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 TOMM5Q8N4H5 51 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 ZNF441Q8N8Z8 693 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 ZNF454Q8N9F8 522 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 EXD3Q8N9H8 876 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 OR4M2Q8NGB6 313 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 OR8K3Q8NH51 312 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 OR5AK2Q8NH90 309 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 ZNF417Q8TAU3 575 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 NUBPLQ8TB37 319 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 UBASH3BQ8TF42 649 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 DEDD2Q8WXF8 326 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 RAB40AQ8WXH6 277 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 SLC7A6Q92536 515 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 CCDC74AQ96AQ1 378 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 MOGAT1Q96PD6 335 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 MARVELD1Q9BSK0 173 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 MMP28Q9H239 520 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 DPAGT1Q9H3H5 408 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 MARCH7Q9H992 704 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 ACOXLQ9NUZ1 547 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 TAS2R10Q9NYW0 307 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 STMN3Q9NZ72 180 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 RARRES3Q9UL19 164 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 TMED7Q9Y3B3 224 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 SIT1Q9Y3P8 196 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 CACNG2Q9Y698 323 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 V9GY05 133 aa8.13□□□□□ -1.11
TMEM116-209ENST00000550020 SCN3AQ9NY46 2000 aa8.12□□□□□ -1.11
TMEM116-209ENST00000550020 A0A0G2JK05 382 aa8.12□□□□□ -1.11
TMEM116-209ENST00000550020 OR2W5A6NFC9 320 aa8.12□□□□□ -1.11
TMEM116-209ENST00000550020 NAP1L6A6NFF2 107 aa8.12□□□□□ -1.11
TMEM116-209ENST00000550020 ANKUB1A6NFN9 424 aa8.12□□□□□ -1.11
TMEM116-209ENST00000550020 INMT-MINDY4F8WBC2 141 aa8.12□□□□□ -1.11
TMEM116-209ENST00000550020 AIPO00170 330 aa8.12□□□□□ -1.11
TMEM116-209ENST00000550020 OIP5O43482 229 aa8.12□□□□□ -1.11
TMEM116-209ENST00000550020 SSX4O60224 188 aa8.12□□□□□ -1.11
TMEM116-209ENST00000550020 SUSD5O60279 629 aa8.12□□□□□ -1.11
TMEM116-209ENST00000550020 FADS1O60427 444 aa8.12□□□□□ -1.11
TMEM116-209ENST00000550020 LDOC1O95751 146 aaPredicted RBP8.12□□□□□ -1.11
TMEM116-209ENST00000550020 ONECUT2O95948 504 aa8.12□□□□□ -1.11
TMEM116-209ENST00000550020 EIF4EP06730 217 aaKnown RBP8.12□□□□□ -1.11
TMEM116-209ENST00000550020 GSTT2BP0CG30 244 aa8.12□□□□□ -1.11
TMEM116-209ENST00000550020 BCKDHBP21953 392 aa8.12□□□□□ -1.11
TMEM116-209ENST00000550020 FKBP2P26885 142 aaKnown RBP8.12□□□□□ -1.11
TMEM116-209ENST00000550020 ERP29P30040 261 aaKnown RBP8.12□□□□□ -1.11
TMEM116-209ENST00000550020 CSF2RBP32927 897 aa8.12□□□□□ -1.11
TMEM116-209ENST00000550020 EVI2BP34910 448 aa8.12□□□□□ -1.11
TMEM116-209ENST00000550020 KIR2DL3P43628 341 aa8.12□□□□□ -1.11
TMEM116-209ENST00000550020 DAP3P51398 398 aaKnown RBP8.12□□□□□ -1.11
TMEM116-209ENST00000550020 RAG2P55895 527 aa8.12□□□□□ -1.11
TMEM116-209ENST00000550020 RPL27P61353 136 aaKnown RBP8.12□□□□□ -1.11
TMEM116-209ENST00000550020 RNF4P78317 190 aa8.12□□□□□ -1.11
TMEM116-209ENST00000550020 DCDP81605 110 aaKnown RBP8.12□□□□□ -1.11
TMEM116-209ENST00000550020 EGR4Q05215 589 aa8.12□□□□□ -1.11
TMEM116-209ENST00000550020 DYRK1AQ13627 763 aa8.12□□□□□ -1.11
TMEM116-209ENST00000550020 P2RY14Q15391 338 aa8.12□□□□□ -1.11
TMEM116-209ENST00000550020 TATDN3Q17R31 274 aa8.12□□□□□ -1.11
TMEM116-209ENST00000550020 VWA2Q5GFL6 755 aa8.12□□□□□ -1.11
TMEM116-209ENST00000550020 ZNF684Q5T5D7 378 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms