RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 C5orf58C9J3I9 102 aa10.6□□□□□ -0.71
DDX54-206ENST00000549271 M0R1B8 84 aa10.6□□□□□ -0.71
DDX54-206ENST00000549271 TPST1O60507 370 aa10.6□□□□□ -0.71
DDX54-206ENST00000549271 UQCRBP14927 111 aa10.6□□□□□ -0.71
DDX54-206ENST00000549271 PAX7P23759 505 aa10.6□□□□□ -0.71
DDX54-206ENST00000549271 MPGP29372 298 aa10.6□□□□□ -0.71
DDX54-206ENST00000549271 IL2RGP31785 369 aa10.6□□□□□ -0.71
DDX54-206ENST00000549271 HOXC5Q00444 222 aa10.6□□□□□ -0.71
DDX54-206ENST00000549271 LGALS3BPQ08380 585 aa10.6□□□□□ -0.71
DDX54-206ENST00000549271 BNIP2Q12982 314 aa10.6□□□□□ -0.71
DDX54-206ENST00000549271 SELPLGQ14242 412 aa10.6□□□□□ -0.71
DDX54-206ENST00000549271 SWI5Q1ZZU3 235 aa10.6□□□□□ -0.71
DDX54-206ENST00000549271 METTL21CQ5VZV1 264 aa10.6□□□□□ -0.71
DDX54-206ENST00000549271 CASP12Q6UXS9 341 aa10.6□□□□□ -0.71
DDX54-206ENST00000549271 PEG10Q86TG7 708 aaKnown RBP10.6□□□□□ -0.71
DDX54-206ENST00000549271 PTOV1Q86YD1 416 aa10.6□□□□□ -0.71
DDX54-206ENST00000549271 CADM2Q8N3J6 435 aa10.6□□□□□ -0.71
DDX54-206ENST00000549271 LINC01356Q8N9X3 169 aa10.6□□□□□ -0.71
DDX54-206ENST00000549271 ZNF540Q8NDQ6 660 aa10.6□□□□□ -0.71
DDX54-206ENST00000549271 TSPEARQ8WU66 669 aa10.6□□□□□ -0.71
DDX54-206ENST00000549271 HPS1Q92902 700 aa10.6□□□□□ -0.71
DDX54-206ENST00000549271 SLC35B4Q969S0 331 aa10.6□□□□□ -0.71
DDX54-206ENST00000549271 CGREF1Q99674 301 aa10.6□□□□□ -0.71
DDX54-206ENST00000549271 ZNF747Q9BV97 191 aa10.6□□□□□ -0.71
DDX54-206ENST00000549271 SF3B5Q9BWJ5 86 aaKnown RBP10.6□□□□□ -0.71
DDX54-206ENST00000549271 TMEM120AQ9BXJ8 343 aa10.6□□□□□ -0.71
DDX54-206ENST00000549271 MYOZ1Q9NP98 299 aaPredicted RBP10.6□□□□□ -0.71
DDX54-206ENST00000549271 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.6□□□□□ -0.71
DDX54-206ENST00000549271 TRIM33Q9UPN9 1127 aa10.6□□□□□ -0.71
DDX54-206ENST00000549271 NDUFAF1Q9Y375 327 aa10.6□□□□□ -0.71
DDX54-206ENST00000549271 KMT2CQ8NEZ4 4911 aaKnown RBP10.59□□□□□ -0.71
DDX54-206ENST00000549271 A0A1W2PR80 420 aa10.59□□□□□ -0.71
DDX54-206ENST00000549271 LIPT2A6NK58 231 aa10.59□□□□□ -0.71
DDX54-206ENST00000549271 EVPLLA8MZ36 301 aa10.59□□□□□ -0.71
DDX54-206ENST00000549271 TMEM229AB2RXF0 380 aa10.59□□□□□ -0.71
DDX54-206ENST00000549271 FBP2O00757 339 aa10.59□□□□□ -0.71
DDX54-206ENST00000549271 NPIPB7O75200 414 aa10.59□□□□□ -0.71
DDX54-206ENST00000549271 TACSTD2P09758 323 aa10.59□□□□□ -0.71
DDX54-206ENST00000549271 CXCR1P25024 350 aa10.59□□□□□ -0.71
DDX54-206ENST00000549271 PRKAR1BP31321 381 aa10.59□□□□□ -0.71
DDX54-206ENST00000549271 ARFIP2P53365 341 aa10.59□□□□□ -0.71
DDX54-206ENST00000549271 HILS1P60008 231 aa10.59□□□□□ -0.71
DDX54-206ENST00000549271 PRPS1P60891 318 aa10.59□□□□□ -0.71
DDX54-206ENST00000549271 COPZ1P61923 177 aa10.59□□□□□ -0.71
DDX54-206ENST00000549271 SLC25A3Q00325 362 aa10.59□□□□□ -0.71
DDX54-206ENST00000549271 CEACAM7Q14002 265 aa10.59□□□□□ -0.71
DDX54-206ENST00000549271 SCARB2Q14108 478 aa10.59□□□□□ -0.71
DDX54-206ENST00000549271 MST1LQ2TV78 715 aa10.59□□□□□ -0.71
DDX54-206ENST00000549271 GLIPR1L2Q4G1C9 344 aa10.59□□□□□ -0.71
DDX54-206ENST00000549271 TSPO2Q5TGU0 170 aa10.59□□□□□ -0.71
DDX54-206ENST00000549271 DHRS4L2Q6PKH6 230 aa10.59□□□□□ -0.71
DDX54-206ENST00000549271 TREML4Q6UXN2 200 aa10.59□□□□□ -0.71
DDX54-206ENST00000549271 RINLQ6ZS11 566 aa10.59□□□□□ -0.71
DDX54-206ENST00000549271 DHDDSQ86SQ9 333 aa10.59□□□□□ -0.71
DDX54-206ENST00000549271 ZIC4Q8N9L1 334 aa10.59□□□□□ -0.71
DDX54-206ENST00000549271 POMGNT2Q8NAT1 580 aa10.59□□□□□ -0.71
DDX54-206ENST00000549271 ZNF418Q8TF45 676 aaPredicted RBP10.59□□□□□ -0.71
DDX54-206ENST00000549271 ANKRD27Q96NW4 1050 aa10.59□□□□□ -0.71
DDX54-206ENST00000549271 WFDC6Q9BQY6 131 aa10.59□□□□□ -0.71
DDX54-206ENST00000549271 RBM4Q9BWF3 364 aaKnown RBP10.59□□□□□ -0.71
DDX54-206ENST00000549271 ARMC7Q9H6L4 198 aa10.59□□□□□ -0.71
DDX54-206ENST00000549271 OBP2BQ9NPH6 170 aa10.59□□□□□ -0.71
DDX54-206ENST00000549271 FGFR1OP2Q9NVK5 253 aa10.59□□□□□ -0.71
DDX54-206ENST00000549271 UPB1Q9UBR1 384 aa10.59□□□□□ -0.71
DDX54-206ENST00000549271 CORO2BQ9UQ03 480 aa10.59□□□□□ -0.71
DDX54-206ENST00000549271 ATP23Q9Y6H3 246 aa10.59□□□□□ -0.71
DDX54-206ENST00000549271 A8MVM7 634 aa10.58□□□□□ -0.72
DDX54-206ENST00000549271 TRIM77I1YAP6 450 aa10.58□□□□□ -0.72
DDX54-206ENST00000549271 LILRA1O75019 489 aa10.58□□□□□ -0.72
DDX54-206ENST00000549271 WNT11O96014 354 aa10.58□□□□□ -0.72
DDX54-206ENST00000549271 SLC6A2P23975 617 aa10.58□□□□□ -0.72
DDX54-206ENST00000549271 HTR2AP28223 471 aa10.58□□□□□ -0.72
DDX54-206ENST00000549271 P2RY4P51582 365 aa10.58□□□□□ -0.72
DDX54-206ENST00000549271 DVL1P1P54792 670 aaPredicted RBP10.58□□□□□ -0.72
DDX54-206ENST00000549271 CDH15P55291 814 aa10.58□□□□□ -0.72
DDX54-206ENST00000549271 GUCY1A3Q02108 690 aa10.58□□□□□ -0.72
DDX54-206ENST00000549271 EGR4Q05215 589 aa10.58□□□□□ -0.72
DDX54-206ENST00000549271 SF3A3Q12874 501 aaKnown RBP eCLIP10.58□□□□□ -0.72
DDX54-206ENST00000549271 CARTPTQ16568 116 aa10.58□□□□□ -0.72
DDX54-206ENST00000549271 SHISA2Q6UWI4 295 aa10.58□□□□□ -0.72
DDX54-206ENST00000549271 USP43Q70EL4 1123 aa10.58□□□□□ -0.72
DDX54-206ENST00000549271 TMEM99Q8N816 258 aa10.58□□□□□ -0.72
DDX54-206ENST00000549271 C1QTNF6Q9BXI9 259 aa10.58□□□□□ -0.72
DDX54-206ENST00000549271 CACYBPQ9HB71 228 aaKnown RBP10.58□□□□□ -0.72
DDX54-206ENST00000549271 PCDHB10Q9UN67 800 aa10.58□□□□□ -0.72
DDX54-206ENST00000549271 PCDHGB1Q9Y5G3 927 aa10.58□□□□□ -0.72
DDX54-206ENST00000549271 AQP7P3A6NL99 342 aa10.57□□□□□ -0.72
DDX54-206ENST00000549271 ANGPT2O15123 496 aa10.57□□□□□ -0.72
DDX54-206ENST00000549271 TPST2O60704 377 aa10.57□□□□□ -0.72
DDX54-206ENST00000549271 MFN2O95140 757 aa10.57□□□□□ -0.72
DDX54-206ENST00000549271 AKR7A3O95154 331 aa10.57□□□□□ -0.72
DDX54-206ENST00000549271 VAMP5O95183 116 aa10.57□□□□□ -0.72
DDX54-206ENST00000549271 GPIP06744 558 aa10.57□□□□□ -0.72
DDX54-206ENST00000549271 PCMT1P22061 227 aa10.57□□□□□ -0.72
DDX54-206ENST00000549271 GIFP27352 417 aa10.57□□□□□ -0.72
DDX54-206ENST00000549271 APEX1P27695 318 aaKnown RBP10.57□□□□□ -0.72
DDX54-206ENST00000549271 AQP1P29972 269 aa10.57□□□□□ -0.72
DDX54-206ENST00000549271 GZMMP51124 257 aa10.57□□□□□ -0.72
DDX54-206ENST00000549271 CHN2P52757 468 aa10.57□□□□□ -0.72
DDX54-206ENST00000549271 PCBP3P57721 371 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms