RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 NRTNQ99748 197 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 ALG12Q9BV10 488 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 PTPRDP23468 1912 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 C5orf67F2Z3F1 127 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 ADAM10O14672 748 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 ARPC1BO15143 372 aaKnown RBP5.33□□□□□ -1.56
VPS50-220ENST00000544910 ARPC5O15511 151 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 GLCEO94923 617 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 TSPAN15O95858 294 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 ATP1B1P05026 303 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 FCER2P06734 321 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 SYPP08247 313 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 RAB40ALP0C0E4 278 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 MAKP20794 623 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 CD34P28906 385 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 PRSS53Q2L4Q9 553 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 TMEM196Q5HYL7 178 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 CASTOR1Q8WTX7 329 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 RAB40AQ8WXH6 277 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 DIO2Q92813 273 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 FGF14Q92915 247 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 FAM46BQ96A09 425 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 OR14A2Q96R54 314 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 CDC6Q99741 560 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 MFFQ9GZY8 342 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 LMAN1LQ9HAT1 526 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 CAMK2AQ9UQM7 478 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 NEUROG3Q9Y4Z2 214 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 TVP23AA6NH52 213 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 VSTM2BA6NLU5 285 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 H7C417 338 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 RFXAPO00287 272 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 PPM1DO15297 605 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 EIF4EP06730 217 aaKnown RBP5.32□□□□□ -1.56
VPS50-220ENST00000544910 SBK2P0C263 348 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 AKAIN1P0CW23 69 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 ZNF35P13682 527 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 HOXB3P14651 431 aaPredicted RBP5.32□□□□□ -1.56
VPS50-220ENST00000544910 PPP3CBP16298 524 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 POLR2HP52434 150 aaKnown RBP5.32□□□□□ -1.56
VPS50-220ENST00000544910 DLX5P56178 289 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 ZP2Q05996 745 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 LTBQ06643 244 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 P2RY14Q15391 338 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 ZXDCQ2QGD7 858 aaPredicted RBP5.32□□□□□ -1.56
VPS50-220ENST00000544910 FCRL6Q6DN72 434 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 MORN4Q8NDC4 146 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 IL17RDQ8NFM7 739 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 OR5L2Q8NGL0 311 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 RASD2Q96D21 266 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 NXF2Q9GZY0 626 aaKnown RBP5.32□□□□□ -1.56
VPS50-220ENST00000544910 PTGES2Q9H7Z7 377 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 EMC7Q9NPA0 242 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 GSKIPQ9P0R6 139 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 NCDNQ9UBB6 729 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 MMACHCQ9Y4U1 282 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 A0A0D9SG52 128 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 TMEM212A6NML5 194 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 P2RX6O15547 441 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 ALDOBP05062 364 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 ERGP11308 486 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 TACR3P29371 465 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 AQP2P41181 271 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 SLC6A9P48067 706 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 CLDN20P56880 219 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 BTG1P62324 171 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 PEA15Q15121 130 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 SF3B4Q15427 424 aaKnown RBP eCLIP5.32□□□□□ -1.562e-7■■□□□ 14.3
VPS50-220ENST00000544910 CARD17Q5XLA6 110 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 RFPL4BQ6ZWI9 263 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 SSX9Q7RTT3 188 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 DGLUCYQ7Z3D6 616 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 ELP5Q8TE02 316 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 THAP3Q8WTV1 239 aaPredicted RBP5.32□□□□□ -1.56
VPS50-220ENST00000544910 SLC7A6Q92536 515 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 OR2A14Q96R47 310 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 PBX4Q9BYU1 374 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 C6orf106Q9H6K1 298 aaPredicted RBP5.32□□□□□ -1.56
VPS50-220ENST00000544910 WDR76Q9H967 626 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 SYNPO2LQ9H987 977 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 RPS10P5Q9NQ39 176 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 PRDM9Q9NQV7 894 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 UFSP2Q9NUQ7 469 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 SLC6A14Q9UN76 642 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 CHST2Q9Y4C5 530 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 TTC3P53804 2025 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 GREB1Q4ZG55 1949 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 C9J4A7 227 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 ZNF878C9JN71 531 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 SMAD9O15198 467 aaKnown RBP5.32□□□□□ -1.56
VPS50-220ENST00000544910 SUSD5O60279 629 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 SPDEFO95238 335 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 F13BP05160 661 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 NAT1P18440 290 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 CD38P28907 300 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 CAMLGP49069 296 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 CCR5P51681 352 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 LUMP51884 338 aaPredicted RBP5.32□□□□□ -1.56
VPS50-220ENST00000544910 MVDP53602 400 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 ZNF674Q2M3X9 581 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms