RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 SEC14L4Q9UDX3 406 aa20.4■□□□□ 0.86
CHFR-222ENST00000544093 LAMP3Q9UQV4 416 aa20.4■□□□□ 0.86
CHFR-222ENST00000544093 SH3GLB1Q9Y371 365 aa20.4■□□□□ 0.86
CHFR-222ENST00000544093 NOX1Q9Y5S8 564 aa20.4■□□□□ 0.86
CHFR-222ENST00000544093 ELOVL7A1L3X0 281 aa20.39■□□□□ 0.85
CHFR-222ENST00000544093 RPL36A-HNRNPH2H7BZ11 118 aa20.39■□□□□ 0.85
CHFR-222ENST00000544093 DANCRP0C864 163 aa20.39■□□□□ 0.85
CHFR-222ENST00000544093 COX4I1P13073 169 aa20.39■□□□□ 0.85
CHFR-222ENST00000544093 HOXB1P14653 301 aaPredicted RBP20.39■□□□□ 0.85
CHFR-222ENST00000544093 CDH11P55287 796 aa20.39■□□□□ 0.85
CHFR-222ENST00000544093 PXKQ7Z7A4 578 aa20.39■□□□□ 0.85
CHFR-222ENST00000544093 GPR137CQ8N3F9 429 aa20.39■□□□□ 0.85
CHFR-222ENST00000544093 POU5F2Q8N7G0 328 aa20.39■□□□□ 0.85
CHFR-222ENST00000544093 OR1K1Q8NGR3 316 aa20.39■□□□□ 0.85
CHFR-222ENST00000544093 MAGEE2Q8TD90 523 aaPredicted RBP20.39■□□□□ 0.85
CHFR-222ENST00000544093 ZNF426Q9BUY5 554 aa20.39■□□□□ 0.85
CHFR-222ENST00000544093 DLL4Q9NR61 685 aa20.39■□□□□ 0.85
CHFR-222ENST00000544093 CISD1Q9NZ45 108 aaKnown RBP20.39■□□□□ 0.85
CHFR-222ENST00000544093 SLC7A7Q9UM01 511 aa20.39■□□□□ 0.85
CHFR-222ENST00000544093 PLCE1Q9P212 2302 aa20.39■□□□□ 0.85
CHFR-222ENST00000544093 HEATR1Q9H583 2144 aaKnown RBP20.38■□□□□ 0.85
CHFR-222ENST00000544093 SHISA9B4DS77 424 aa20.38■□□□□ 0.85
CHFR-222ENST00000544093 MS4A18H0YCH9 400 aa20.38■□□□□ 0.85
CHFR-222ENST00000544093 TRAF3IP2O43734 574 aaPredicted RBP20.38■□□□□ 0.85
CHFR-222ENST00000544093 CDH2P19022 906 aaPredicted RBP20.38■□□□□ 0.85
CHFR-222ENST00000544093 CBLP22681 906 aa20.38■□□□□ 0.85
CHFR-222ENST00000544093 KDELR2P33947 212 aa20.38■□□□□ 0.85
CHFR-222ENST00000544093 LTBQ06643 244 aa20.38■□□□□ 0.85
CHFR-222ENST00000544093 MS4A18Q3C1V0 323 aa20.38■□□□□ 0.85
CHFR-222ENST00000544093 ANKRD16Q6P6B7 361 aa20.38■□□□□ 0.85
CHFR-222ENST00000544093 SLC22A25Q6T423 547 aa20.38■□□□□ 0.85
CHFR-222ENST00000544093 CARM1Q86X55 608 aa20.38■□□□□ 0.85
CHFR-222ENST00000544093 RBM45Q8IUH3 476 aaKnown RBP20.38■□□□□ 0.85
CHFR-222ENST00000544093 MICU2Q8IYU8 434 aa20.38■□□□□ 0.85
CHFR-222ENST00000544093 PIAS4Q8N2W9 510 aaPredicted RBP20.38■□□□□ 0.85
CHFR-222ENST00000544093 OR4D11Q8NGI4 311 aa20.38■□□□□ 0.85
CHFR-222ENST00000544093 OR5J2Q8NH18 312 aa20.38■□□□□ 0.85
CHFR-222ENST00000544093 LZICQ8WZA0 190 aa20.38■□□□□ 0.85
CHFR-222ENST00000544093 CMTM5Q96DZ9 223 aa20.38■□□□□ 0.85
CHFR-222ENST00000544093 TRMT61AQ96FX7 289 aaKnown RBP20.38■□□□□ 0.85
CHFR-222ENST00000544093 MOGAT1Q96PD6 335 aa20.38■□□□□ 0.85
CHFR-222ENST00000544093 GRIP2Q9C0E4 1043 aa20.38■□□□□ 0.85
CHFR-222ENST00000544093 FKRPQ9H9S5 495 aa20.38■□□□□ 0.85
CHFR-222ENST00000544093 POU2F3Q9UKI9 436 aa20.38■□□□□ 0.85
CHFR-222ENST00000544093 VPS13CQ709C8 3753 aa20.38■□□□□ 0.85
CHFR-222ENST00000544093 ZNF469Q96JG9 3925 aaPredicted RBP20.37■□□□□ 0.85
CHFR-222ENST00000544093 A0A1W2PR80 420 aa20.37■□□□□ 0.85
CHFR-222ENST00000544093 M0R1B8 84 aa20.37■□□□□ 0.85
CHFR-222ENST00000544093 UPK3AO75631 287 aa20.37■□□□□ 0.85
CHFR-222ENST00000544093 OR6A2O95222 327 aa20.37■□□□□ 0.85
CHFR-222ENST00000544093 RIPPLY3P57055 190 aa20.37■□□□□ 0.85
CHFR-222ENST00000544093 TAS2R41P59536 307 aa20.37■□□□□ 0.85
CHFR-222ENST00000544093 UBE2NP61088 152 aaKnown RBP20.37■□□□□ 0.85
CHFR-222ENST00000544093 ROR2Q01974 943 aaKnown RBP20.37■□□□□ 0.85
CHFR-222ENST00000544093 ETFDHQ16134 617 aa20.37■□□□□ 0.85
CHFR-222ENST00000544093 HACD2Q6Y1H2 254 aa20.37■□□□□ 0.85
CHFR-222ENST00000544093 YTHDF3Q7Z739 585 aaKnown RBP20.37■□□□□ 0.85
CHFR-222ENST00000544093 LRR1Q96L50 414 aa20.37■□□□□ 0.85
CHFR-222ENST00000544093 OR2M2Q96R28 347 aa20.37■□□□□ 0.85
CHFR-222ENST00000544093 ELAC2Q9BQ52 826 aaKnown RBP20.37■□□□□ 0.85
CHFR-222ENST00000544093 ALG2Q9H553 416 aa20.37■□□□□ 0.85
CHFR-222ENST00000544093 NANSQ9NR45 359 aa20.37■□□□□ 0.85
CHFR-222ENST00000544093 ZNF229Q9UJW7 825 aa20.37■□□□□ 0.85
CHFR-222ENST00000544093 PLPP3O14495 311 aa20.36■□□□□ 0.85
CHFR-222ENST00000544093 OR5F1O95221 314 aa20.36■□□□□ 0.85
CHFR-222ENST00000544093 LYPD3O95274 346 aa20.36■□□□□ 0.85
CHFR-222ENST00000544093 THRBP10828 461 aa20.36■□□□□ 0.85
CHFR-222ENST00000544093 RBM34P42696 430 aaKnown RBP20.36■□□□□ 0.85
CHFR-222ENST00000544093 POU3F1Q03052 451 aaPredicted RBP20.36■□□□□ 0.85
CHFR-222ENST00000544093 ZNF74Q16587 644 aa20.36■□□□□ 0.85
CHFR-222ENST00000544093 TBRG1Q3YBR2 411 aa20.36■□□□□ 0.85
CHFR-222ENST00000544093 LRRC23Q53EV4 343 aaPredicted RBP20.36■□□□□ 0.85
CHFR-222ENST00000544093 HIKESHIQ53FT3 197 aa20.36■□□□□ 0.85
CHFR-222ENST00000544093 CYBRD1Q53TN4 286 aa20.36■□□□□ 0.85
CHFR-222ENST00000544093 WDR88Q6ZMY6 472 aa20.36■□□□□ 0.85
CHFR-222ENST00000544093 GTPBP3Q969Y2 492 aaKnown RBP20.36■□□□□ 0.85
CHFR-222ENST00000544093 C18orf12Q96KH6 178 aa20.36■□□□□ 0.85
CHFR-222ENST00000544093 BDH2Q9BUT1 245 aa20.36■□□□□ 0.85
CHFR-222ENST00000544093 B3GAT2Q9NPZ5 323 aa20.36■□□□□ 0.85
CHFR-222ENST00000544093 USF3Q68DE3 2245 aa20.36■□□□□ 0.85
CHFR-222ENST00000544093 SETD2Q9BYW2 2564 aaPredicted RBP20.36■□□□□ 0.85
CHFR-222ENST00000544093 ARPC4-TTLL3A0A0A6YYG9 625 aa20.35■□□□□ 0.85
CHFR-222ENST00000544093 OVOL3O00110 214 aa20.35■□□□□ 0.85
CHFR-222ENST00000544093 IGF2P01344 180 aa20.35■□□□□ 0.85
CHFR-222ENST00000544093 THY1P04216 161 aa20.35■□□□□ 0.85
CHFR-222ENST00000544093 HIST1H2ABP04908 130 aa20.35■□□□□ 0.85
CHFR-222ENST00000544093 SOD3P08294 240 aa20.35■□□□□ 0.85
CHFR-222ENST00000544093 ADORA3P0DMS8 318 aa20.35■□□□□ 0.85
CHFR-222ENST00000544093 AHCYP23526 432 aa20.35■□□□□ 0.85
CHFR-222ENST00000544093 IFNA8P32881 189 aa20.35■□□□□ 0.85
CHFR-222ENST00000544093 ATP5J2P56134 94 aa20.35■□□□□ 0.85
CHFR-222ENST00000544093 SELENOWP63302 87 aa20.35■□□□□ 0.85
CHFR-222ENST00000544093 LGALS3BPQ08380 585 aa20.35■□□□□ 0.85
CHFR-222ENST00000544093 PGGHGQ32M88 737 aa20.35■□□□□ 0.85
CHFR-222ENST00000544093 C3orf36Q3SXR2 165 aa20.35■□□□□ 0.85
CHFR-222ENST00000544093 AGAP6Q5VW22 663 aa20.35■□□□□ 0.85
CHFR-222ENST00000544093 HIST3H2AQ7L7L0 130 aa20.35■□□□□ 0.85
CHFR-222ENST00000544093 CPLX4Q7Z7G2 160 aa20.35■□□□□ 0.85
CHFR-222ENST00000544093 DTX2Q86UW9 622 aa20.35■□□□□ 0.85
CHFR-222ENST00000544093 SLC15A3Q8IY34 581 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms