RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 SSTR2P30874 369 aa5.31□□□□□ -1.56
XRCC4-206ENST00000542685 MAS1LP35410 378 aa5.31□□□□□ -1.56
XRCC4-206ENST00000542685 MAP3K8P41279 467 aa5.31□□□□□ -1.56
XRCC4-206ENST00000542685 EVX1P49640 407 aa5.31□□□□□ -1.56
XRCC4-206ENST00000542685 IDH3GP51553 393 aaPredicted RBP5.31□□□□□ -1.56
XRCC4-206ENST00000542685 CEBPGP53567 150 aa5.31□□□□□ -1.56
XRCC4-206ENST00000542685 AP3S2P59780 193 aa5.31□□□□□ -1.56
XRCC4-206ENST00000542685 SEC61A1P61619 476 aaKnown RBP5.31□□□□□ -1.56
XRCC4-206ENST00000542685 TCP10Q12799 353 aa5.31□□□□□ -1.56
XRCC4-206ENST00000542685 PMS2P11Q13670 270 aa5.31□□□□□ -1.56
XRCC4-206ENST00000542685 CAPSQ13938 189 aa5.31□□□□□ -1.56
XRCC4-206ENST00000542685 RPS6KA2Q15349 733 aa5.31□□□□□ -1.56
XRCC4-206ENST00000542685 OR8G1Q15617 311 aa5.31□□□□□ -1.56
XRCC4-206ENST00000542685 MPPED2Q15777 294 aa5.31□□□□□ -1.56
XRCC4-206ENST00000542685 TSTQ16762 297 aaKnown RBP5.31□□□□□ -1.56
XRCC4-206ENST00000542685 EXOC3L2Q2M3D2 409 aa5.31□□□□□ -1.56
XRCC4-206ENST00000542685 KRTCAP3Q53RY4 240 aa5.31□□□□□ -1.56
XRCC4-206ENST00000542685 PIK3CD-AS1Q5SR53 167 aa5.31□□□□□ -1.56
XRCC4-206ENST00000542685 IDNKQ5T6J7 187 aa5.31□□□□□ -1.56
XRCC4-206ENST00000542685 BCL2L15Q5TBC7 163 aa5.31□□□□□ -1.56
XRCC4-206ENST00000542685 ZNF57Q68EA5 555 aaPredicted RBP5.31□□□□□ -1.56
XRCC4-206ENST00000542685 LRRN1Q6UXK5 716 aa5.31□□□□□ -1.56
XRCC4-206ENST00000542685 ZNF730Q6ZMV8 503 aa5.31□□□□□ -1.56
XRCC4-206ENST00000542685 DET1Q7L5Y6 550 aa5.31□□□□□ -1.56
XRCC4-206ENST00000542685 SZRD1Q7Z422 152 aa5.31□□□□□ -1.56
XRCC4-206ENST00000542685 ABI3BPQ7Z7G0 1075 aa5.31□□□□□ -1.56
XRCC4-206ENST00000542685 CUZD1Q86UP6 607 aa5.31□□□□□ -1.56
XRCC4-206ENST00000542685 LRRTM4Q86VH4 590 aa5.31□□□□□ -1.56
XRCC4-206ENST00000542685 IFNEQ86WN2 208 aa5.31□□□□□ -1.56
XRCC4-206ENST00000542685 SERPINA12Q8IW75 414 aa5.31□□□□□ -1.56
XRCC4-206ENST00000542685 MFSD6LQ8IWD5 586 aa5.31□□□□□ -1.56
XRCC4-206ENST00000542685 GCNT2Q8N0V5 402 aa5.31□□□□□ -1.56
XRCC4-206ENST00000542685 PRSS35Q8N3Z0 413 aa5.31□□□□□ -1.56
XRCC4-206ENST00000542685 ZNF321PQ8N8H1 164 aa5.31□□□□□ -1.56
XRCC4-206ENST00000542685 OR10K1Q8NGX5 313 aa5.31□□□□□ -1.56
XRCC4-206ENST00000542685 OR10A6Q8NH74 314 aa5.31□□□□□ -1.56
XRCC4-206ENST00000542685 TERB2Q8NHR7 220 aa5.31□□□□□ -1.56
XRCC4-206ENST00000542685 CD99L2Q8TCZ2 262 aa5.31□□□□□ -1.56
XRCC4-206ENST00000542685 C2CD4CQ8TF44 421 aa5.31□□□□□ -1.56
XRCC4-206ENST00000542685 APH1BQ8WW43 257 aa5.31□□□□□ -1.56
XRCC4-206ENST00000542685 FAM120BQ96EK7 910 aaKnown RBP5.31□□□□□ -1.56
XRCC4-206ENST00000542685 SMARCD1Q96GM5 515 aa5.31□□□□□ -1.56
XRCC4-206ENST00000542685 PPP1R36Q96LQ0 422 aa5.31□□□□□ -1.56
XRCC4-206ENST00000542685 KCTD7Q96MP8 289 aa5.31□□□□□ -1.56
XRCC4-206ENST00000542685 OR2A7Q96R45 310 aa5.31□□□□□ -1.56
XRCC4-206ENST00000542685 TAAR1Q96RJ0 339 aa5.31□□□□□ -1.56
XRCC4-206ENST00000542685 SORBS1Q9BX66 1292 aaKnown RBP5.31□□□□□ -1.56
XRCC4-206ENST00000542685 NLNQ9BYT8 704 aa5.31□□□□□ -1.56
XRCC4-206ENST00000542685 CHST5Q9GZS9 411 aa5.31□□□□□ -1.56
XRCC4-206ENST00000542685 SLC26A1Q9H2B4 701 aa5.31□□□□□ -1.56
XRCC4-206ENST00000542685 NMNAT1Q9HAN9 279 aaPredicted RBP5.31□□□□□ -1.56
XRCC4-206ENST00000542685 GPN1Q9HCN4 374 aaPredicted RBP5.31□□□□□ -1.56
XRCC4-206ENST00000542685 SLC52A3Q9NQ40 469 aa5.31□□□□□ -1.56
XRCC4-206ENST00000542685 NKIRAS2Q9NYR9 191 aa5.31□□□□□ -1.56
XRCC4-206ENST00000542685 TAS2R10Q9NYW0 307 aa5.31□□□□□ -1.56
XRCC4-206ENST00000542685 MRTO4Q9UKD2 239 aaKnown RBP5.31□□□□□ -1.56
XRCC4-206ENST00000542685 IKZF3Q9UKT9 509 aa5.31□□□□□ -1.56
XRCC4-206ENST00000542685 SLC35A3Q9Y2D2 325 aa5.31□□□□□ -1.56
XRCC4-206ENST00000542685 MRPS18CQ9Y3D5 142 aaKnown RBP5.31□□□□□ -1.56
XRCC4-206ENST00000542685 ATG4BQ9Y4P1 393 aa5.31□□□□□ -1.56
XRCC4-206ENST00000542685 MMACHCQ9Y4U1 282 aa5.31□□□□□ -1.56
XRCC4-206ENST00000542685 POMT1Q9Y6A1 747 aa5.31□□□□□ -1.56
XRCC4-206ENST00000542685 TBC1D3DA0A087WVF3 549 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 TBC1D3IA0A087WXS9 549 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 TBC1D3EA0A087X179 549 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 TRAV19A0A0A6YYK7 116 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 A0A0D9SG52 128 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 TBC1D3BA6NDS4 549 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 TBC1D3FA6NER0 549 aaPredicted RBP5.3□□□□□ -1.56
XRCC4-206ENST00000542685 A6NIZ1 184 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 OR2AT4A6NND4 320 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 TBC1D3LB9A6J9 549 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 G3V3Q6 166 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 RPL36A-HNRNPH2H7BZ11 118 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 GFYI3L273 518 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 J3KTA2 159 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 NPC1O15118 1278 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 PGRMC2O15173 223 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 TGOLN2O43493 480 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 SSNA1O43805 119 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 SH3BGRLO75368 114 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 KHDRBS3O75525 346 aaKnown RBP5.3□□□□□ -1.56
XRCC4-206ENST00000542685 GATBO75879 557 aaKnown RBP5.3□□□□□ -1.56
XRCC4-206ENST00000542685 GLP2RO95838 553 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 TCRBP04435 133 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 HIST1H2ABP04908 130 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 IL5P05113 134 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 EDN1P05305 212 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 SLC35E2BP0CK96 405 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 ZNF44P15621 663 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 TBXA2RP21731 343 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 FGF7P21781 194 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 PTPN3P26045 913 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 G0S2P27469 103 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 FGF9P31371 208 aaPredicted RBP5.3□□□□□ -1.56
XRCC4-206ENST00000542685 PBX3P40426 434 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 GLP1RP43220 463 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 MRPS11P82912 194 aaKnown RBP5.3□□□□□ -1.56
XRCC4-206ENST00000542685 TWF1Q12792 350 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 NPRL3Q12980 569 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms