RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 KDM8Q8N371 416 aa11.52□□□□□ -0.57
LTBR-208ENST00000541005 OR5J2Q8NH18 312 aa11.52□□□□□ -0.57
LTBR-208ENST00000541005 MUCL1Q96DR8 90 aa11.52□□□□□ -0.57
LTBR-208ENST00000541005 ALPK1Q96QP1 1244 aa11.52□□□□□ -0.57
LTBR-208ENST00000541005 ESRP2Q9H6T0 727 aaKnown RBP11.52□□□□□ -0.57
LTBR-208ENST00000541005 MEPEQ9NQ76 525 aaPredicted RBP11.52□□□□□ -0.57
LTBR-208ENST00000541005 NDE1Q9NXR1 346 aa11.52□□□□□ -0.57
LTBR-208ENST00000541005 RIMS3Q9UJD0 308 aa11.52□□□□□ -0.57
LTBR-208ENST00000541005 ZNF229Q9UJW7 825 aa11.52□□□□□ -0.57
LTBR-208ENST00000541005 A4GNTQ9UNA3 340 aa11.52□□□□□ -0.57
LTBR-208ENST00000541005 NOX1Q9Y5S8 564 aa11.52□□□□□ -0.57
LTBR-208ENST00000541005 SLC25A15Q9Y619 301 aa11.52□□□□□ -0.57
LTBR-208ENST00000541005 ACANP16112 2415 aa11.52□□□□□ -0.57
LTBR-208ENST00000541005 CELSR1Q9NYQ6 3014 aa11.52□□□□□ -0.57
LTBR-208ENST00000541005 ARFGEF3Q5TH69 2177 aa11.52□□□□□ -0.57
LTBR-208ENST00000541005 FLNAP21333 2647 aaKnown RBP11.52□□□□□ -0.57
LTBR-208ENST00000541005 CIB4A0PJX0 185 aa11.51□□□□□ -0.57
LTBR-208ENST00000541005 HTR3EA5X5Y0 456 aa11.51□□□□□ -0.57
LTBR-208ENST00000541005 ZNF587BE7ETH6 402 aa11.51□□□□□ -0.57
LTBR-208ENST00000541005 LRRN3E7EW58 273 aa11.51□□□□□ -0.57
LTBR-208ENST00000541005 RPL36A-HNRNPH2H7BZ11 118 aa11.51□□□□□ -0.57
LTBR-208ENST00000541005 SERPINA1P01009 418 aa11.51□□□□□ -0.57
LTBR-208ENST00000541005 MT-ND1P03886 318 aa11.51□□□□□ -0.57
LTBR-208ENST00000541005 IFNW1P05000 195 aa11.51□□□□□ -0.57
LTBR-208ENST00000541005 ASAH2BP0C7U1 165 aa11.51□□□□□ -0.57
LTBR-208ENST00000541005 CD53P19397 219 aa11.51□□□□□ -0.57
LTBR-208ENST00000541005 SH3BGRP55822 239 aaPredicted RBP11.51□□□□□ -0.57
LTBR-208ENST00000541005 ZP4Q12836 540 aa11.51□□□□□ -0.57
LTBR-208ENST00000541005 PMS2P3Q13401 168 aa11.51□□□□□ -0.57
LTBR-208ENST00000541005 C1DQ13901 141 aaKnown RBP11.51□□□□□ -0.57
LTBR-208ENST00000541005 IFI44LQ53G44 452 aa11.51□□□□□ -0.57
LTBR-208ENST00000541005 ADAM5Q6NVV9 412 aa11.51□□□□□ -0.57
LTBR-208ENST00000541005 ZNF704Q6ZNC4 412 aaPredicted RBP11.51□□□□□ -0.57
LTBR-208ENST00000541005 LINGO2Q7L985 606 aa11.51□□□□□ -0.57
LTBR-208ENST00000541005 SLC46A3Q7Z3Q1 461 aa11.51□□□□□ -0.57
LTBR-208ENST00000541005 NKAIN4Q8IVV8 208 aa11.51□□□□□ -0.57
LTBR-208ENST00000541005 UEVLDQ8IX04 471 aa11.51□□□□□ -0.57
LTBR-208ENST00000541005 C10orf53Q8N6V4 93 aa11.51□□□□□ -0.57
LTBR-208ENST00000541005 LIPHQ8WWY8 451 aa11.51□□□□□ -0.57
LTBR-208ENST00000541005 HS6ST2Q96MM7 605 aa11.51□□□□□ -0.57
LTBR-208ENST00000541005 ALKBH3Q96Q83 286 aaPredicted RBP11.51□□□□□ -0.57
LTBR-208ENST00000541005 OR2M2Q96R28 347 aa11.51□□□□□ -0.57
LTBR-208ENST00000541005 OBP2BQ9NPH6 170 aa11.51□□□□□ -0.57
LTBR-208ENST00000541005 NANSQ9NR45 359 aa11.51□□□□□ -0.57
LTBR-208ENST00000541005 SLC17A5Q9NRA2 495 aa11.51□□□□□ -0.57
LTBR-208ENST00000541005 CCM2LQ9NUG4 571 aaPredicted RBP11.51□□□□□ -0.57
LTBR-208ENST00000541005 NPAP1Q9NZP6 1156 aa11.51□□□□□ -0.57
LTBR-208ENST00000541005 RNF115Q9Y4L5 304 aa11.51□□□□□ -0.57
LTBR-208ENST00000541005 KPNA4O00629 521 aaPredicted RBP11.5□□□□□ -0.57
LTBR-208ENST00000541005 SLC43A1O75387 559 aa11.5□□□□□ -0.57
LTBR-208ENST00000541005 UPK3AO75631 287 aa11.5□□□□□ -0.57
LTBR-208ENST00000541005 PRSS23O95084 383 aa11.5□□□□□ -0.57
LTBR-208ENST00000541005 ZNF682O95780 498 aa11.5□□□□□ -0.57
LTBR-208ENST00000541005 CH25HO95992 272 aa11.5□□□□□ -0.57
LTBR-208ENST00000541005 HLA-DOBP13765 273 aa11.5□□□□□ -0.57
LTBR-208ENST00000541005 CBLP22681 906 aa11.5□□□□□ -0.57
LTBR-208ENST00000541005 MNAT1P51948 309 aa11.5□□□□□ -0.57
LTBR-208ENST00000541005 ART1P52961 327 aa11.5□□□□□ -0.57
LTBR-208ENST00000541005 UGT2B15P54855 530 aa11.5□□□□□ -0.57
LTBR-208ENST00000541005 POU3F1Q03052 451 aaPredicted RBP11.5□□□□□ -0.57
LTBR-208ENST00000541005 BSPH1Q075Z2 132 aa11.5□□□□□ -0.57
LTBR-208ENST00000541005 LGALS3BPQ08380 585 aa11.5□□□□□ -0.57
LTBR-208ENST00000541005 ST3GAL3Q11203 375 aa11.5□□□□□ -0.57
LTBR-208ENST00000541005 KEAP1Q14145 624 aa11.5□□□□□ -0.57
LTBR-208ENST00000541005 ACKR1Q16570 336 aa11.5□□□□□ -0.57
LTBR-208ENST00000541005 SAMD4BQ5PRF9 694 aaKnown RBP11.5□□□□□ -0.57
LTBR-208ENST00000541005 LURAP1LQ8IV03 231 aa11.5□□□□□ -0.57
LTBR-208ENST00000541005 FITM2Q8N6M3 262 aa11.5□□□□□ -0.57
LTBR-208ENST00000541005 WDR31Q8NA23 367 aa11.5□□□□□ -0.57
LTBR-208ENST00000541005 TMEM255BQ8WV15 326 aa11.5□□□□□ -0.57
LTBR-208ENST00000541005 TMEM239Q8WW34 195 aa11.5□□□□□ -0.57
LTBR-208ENST00000541005 IGFBPL1Q8WX77 278 aa11.5□□□□□ -0.57
LTBR-208ENST00000541005 FAM162AQ96A26 154 aa11.5□□□□□ -0.57
LTBR-208ENST00000541005 HSH2DQ96JZ2 352 aa11.5□□□□□ -0.57
LTBR-208ENST00000541005 LRR1Q96L50 414 aa11.5□□□□□ -0.57
LTBR-208ENST00000541005 PIP5K1AQ99755 562 aa11.5□□□□□ -0.57
LTBR-208ENST00000541005 GORASP2Q9H8Y8 452 aa11.5□□□□□ -0.57
LTBR-208ENST00000541005 MAN2C1Q9NTJ4 1040 aa11.5□□□□□ -0.57
LTBR-208ENST00000541005 BEX4Q9NWD9 120 aaPredicted RBP11.5□□□□□ -0.57
LTBR-208ENST00000541005 ADA2Q9NZK5 511 aa11.5□□□□□ -0.57
LTBR-208ENST00000541005 CD300AQ9UGN4 299 aa11.5□□□□□ -0.57
LTBR-208ENST00000541005 RPS6KA6Q9UK32 745 aa11.5□□□□□ -0.57
LTBR-208ENST00000541005 AMDHD2Q9Y303 409 aa11.5□□□□□ -0.57
LTBR-208ENST00000541005 MAGED1Q9Y5V3 778 aaPredicted RBP11.5□□□□□ -0.57
LTBR-208ENST00000541005 AKAP9Q99996 3911 aa11.5□□□□□ -0.57
LTBR-208ENST00000541005 RTTNQ86VV8 2226 aa11.5□□□□□ -0.57
LTBR-208ENST00000541005 DPRXA6NFQ7 191 aa11.49□□□□□ -0.57
LTBR-208ENST00000541005 HS3ST1O14792 307 aa11.49□□□□□ -0.57
LTBR-208ENST00000541005 FFAR1O14842 300 aa11.49□□□□□ -0.57
LTBR-208ENST00000541005 TMCC2O75069 709 aa11.49□□□□□ -0.57
LTBR-208ENST00000541005 KRT33AO76009 404 aa11.49□□□□□ -0.57
LTBR-208ENST00000541005 PLAUP00749 431 aa11.49□□□□□ -0.57
LTBR-208ENST00000541005 CD3EP07766 207 aa11.49□□□□□ -0.57
LTBR-208ENST00000541005 TSPAN19P0C672 248 aa11.49□□□□□ -0.57
LTBR-208ENST00000541005 ADORA3P0DMS8 318 aa11.49□□□□□ -0.57
LTBR-208ENST00000541005 NCK1P16333 377 aa11.49□□□□□ -0.57
LTBR-208ENST00000541005 PAX7P23759 505 aa11.49□□□□□ -0.57
LTBR-208ENST00000541005 IFNA8P32881 189 aa11.49□□□□□ -0.57
LTBR-208ENST00000541005 IL1RL1Q01638 556 aa11.49□□□□□ -0.57
LTBR-208ENST00000541005 DEFB113Q30KQ7 82 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms