RNA–Protein interactions for RNA: ENST00000539722.5

PRKCQ-203, Transcript of protein kinase C theta, humanhuman

TSL 2 BASIC

Gene PRKCQ, Length 3,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCQ-203ENST00000539722 ZNF879B4DU55 563 aa11.19□□□□□ -0.62
PRKCQ-203ENST00000539722 NME1P15531 152 aaKnown RBP11.19□□□□□ -0.62
PRKCQ-203ENST00000539722 MC3RP41968 323 aa11.19□□□□□ -0.62
PRKCQ-203ENST00000539722 GRB14Q14449 540 aa11.19□□□□□ -0.62
PRKCQ-203ENST00000539722 PRAMEF14Q5SWL7 426 aa11.19□□□□□ -0.62
PRKCQ-203ENST00000539722 FRRS1Q6ZNA5 592 aa11.19□□□□□ -0.62
PRKCQ-203ENST00000539722 ZNF467Q7Z7K2 595 aaPredicted RBP11.19□□□□□ -0.62
PRKCQ-203ENST00000539722 TEX19Q8NA77 164 aa11.19□□□□□ -0.62
PRKCQ-203ENST00000539722 ZNRF4Q8WWF5 429 aa11.19□□□□□ -0.62
PRKCQ-203ENST00000539722 PLD4Q96BZ4 506 aa11.19□□□□□ -0.62
PRKCQ-203ENST00000539722 UTP23Q9BRU9 249 aaKnown RBP11.19□□□□□ -0.62
PRKCQ-203ENST00000539722 KLHL31Q9H511 634 aa11.19□□□□□ -0.62
PRKCQ-203ENST00000539722 SEBOXQ9HB31 216 aaPredicted RBP11.19□□□□□ -0.62
PRKCQ-203ENST00000539722 KLHL28Q9NXS3 571 aa11.19□□□□□ -0.62
PRKCQ-203ENST00000539722 CARHSP1Q9Y2V2 147 aaKnown RBP11.19□□□□□ -0.62
PRKCQ-203ENST00000539722 TMEM82A0PJX8 343 aa11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 SNAPC5O75971 98 aa11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 DDNO94850 711 aaPredicted RBP11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 OR8U8P0C7N1 319 aa11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 PGAM2P15259 253 aa11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 SPI1P17947 270 aa11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 ADRA2CP18825 462 aa11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 AGTR1P30556 359 aa11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 NANOS3P60323 173 aaKnown RBP11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 PGAP1Q75T13 922 aa11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 ARL14EPQ8N8R7 260 aaPredicted RBP11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 OR52E2Q8NGJ4 325 aa11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 OR6K6Q8NGW6 343 aa11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 OR4C6Q8NH72 309 aa11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 GRHL3Q8TE85 626 aa11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 SETD7Q8WTS6 366 aaKnown RBP11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 CASTOR1Q8WTX7 329 aa11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 HIST1H2BAQ96A08 127 aa11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 COL26A1Q96A83 441 aa11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 ACKR4Q9NPB9 350 aa11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 MDC1Q14676 2089 aaKnown RBP11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 CACNB4O00305 520 aaPredicted RBP11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 ZFPL1O95159 310 aa11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 GABRR2P28476 465 aa11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 SSR2P43308 183 aa11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 ID4P47928 161 aa11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 LTBQ06643 244 aa11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 NKPD1Q17RQ9 610 aa11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 GXYLT1Q4G148 440 aa11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 NKAPLQ5M9Q1 402 aa11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 PRAMEF17Q5VTA0 474 aa11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 OR6N1Q8NGY5 312 aa11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 STOML3Q8TAV4 291 aa11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 CMC2Q9NRP2 79 aa11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 BRWD3Q6RI45 1802 aa11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 C5orf42Q9H799 3197 aa11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 SFTA3P0C7M3 94 aa11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 CD53P19397 219 aa11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 MECP2P51608 486 aaKnown RBP11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 TAS2R38P59533 333 aa11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 SNRPD1P62314 119 aaKnown RBP11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 IRF5Q13568 498 aa11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 NR0B2Q15466 257 aa11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 EXOSC6Q5RKV6 272 aaKnown RBP11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 KCTD9Q7L273 389 aa11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 RTN4RL1Q86UN2 441 aaPredicted RBP11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 PPP1R3BQ86XI6 285 aa11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 PCSK9Q8NBP7 692 aaKnown RBP11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 OR51D1Q8NGF3 324 aa11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 OR9A1PQ8NGU1 263 aa11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 LYSMD1Q96S90 227 aa11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 ARHGDIGQ99819 225 aa11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 NRIP2Q9BQI9 281 aa11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 TCF7L1Q9HCS4 588 aa11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 BCL2L10Q9HD36 194 aa11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 CLDND1Q9NY35 253 aa11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 NCDNQ9UBB6 729 aa11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 STEAP1Q9UHE8 339 aa11.18□□□□□ -0.62
PRKCQ-203ENST00000539722 ZNF729A6NN14 1252 aaPredicted RBP11.17□□□□□ -0.62
PRKCQ-203ENST00000539722 C9JQL5 133 aa11.17□□□□□ -0.62
PRKCQ-203ENST00000539722 H7C417 338 aa11.17□□□□□ -0.62
PRKCQ-203ENST00000539722 OR1F1O43749 312 aa11.17□□□□□ -0.62
PRKCQ-203ENST00000539722 GLSO94925 669 aaPredicted RBP11.17□□□□□ -0.62
PRKCQ-203ENST00000539722 YIF1AO95070 293 aa11.17□□□□□ -0.62
PRKCQ-203ENST00000539722 HLA-AP01891 365 aaKnown RBP11.17□□□□□ -0.62
PRKCQ-203ENST00000539722 RPN2P04844 631 aa11.17□□□□□ -0.62
PRKCQ-203ENST00000539722 SNRNP70P08621 437 aaKnown RBP11.17□□□□□ -0.62
PRKCQ-203ENST00000539722 CD34P28906 385 aa11.17□□□□□ -0.62
PRKCQ-203ENST00000539722 SSTP61278 116 aa11.17□□□□□ -0.62
PRKCQ-203ENST00000539722 ARSIQ5FYB1 569 aa11.17□□□□□ -0.62
PRKCQ-203ENST00000539722 ZNF836Q6ZNA1 936 aa11.17□□□□□ -0.62
PRKCQ-203ENST00000539722 OR5AR1Q8NGP9 310 aa11.17□□□□□ -0.62
PRKCQ-203ENST00000539722 OR9A2Q8NGT5 310 aa11.17□□□□□ -0.62
PRKCQ-203ENST00000539722 HSPA12BQ96MM6 686 aa11.17□□□□□ -0.62
PRKCQ-203ENST00000539722 MYADMQ96S97 322 aa11.17□□□□□ -0.62
PRKCQ-203ENST00000539722 GGACTQ9BVM4 153 aa11.17□□□□□ -0.62
PRKCQ-203ENST00000539722 MTFP1Q9UDX5 166 aa11.17□□□□□ -0.62
PRKCQ-203ENST00000539722 PCDHGA1Q9Y5H4 931 aa11.17□□□□□ -0.62
PRKCQ-203ENST00000539722 TCF20Q9UGU0 1960 aaKnown RBP11.17□□□□□ -0.62
PRKCQ-203ENST00000539722 HTTP42858 3142 aa11.17□□□□□ -0.62
PRKCQ-203ENST00000539722 C13orf42A0A1B0GVH6 325 aa11.17□□□□□ -0.62
PRKCQ-203ENST00000539722 A0A1W2PPH5 198 aa11.17□□□□□ -0.62
PRKCQ-203ENST00000539722 GGT3PA6NGU5 568 aa11.17□□□□□ -0.62
PRKCQ-203ENST00000539722 SULT2B1O00204 365 aa11.17□□□□□ -0.62
PRKCQ-203ENST00000539722 ALOX12BO75342 701 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms