RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 ALPK1Q96QP1 1244 aa11.26□□□□□ -0.61
TSPAN9-207ENST00000539631 VNN3Q9NY84 501 aa11.26□□□□□ -0.61
TSPAN9-207ENST00000539631 FREM1Q5H8C1 2179 aa11.26□□□□□ -0.61
TSPAN9-207ENST00000539631 LOC102725191A0A1B0GVB3 256 aa11.25□□□□□ -0.61
TSPAN9-207ENST00000539631 HTR3EA5X5Y0 456 aa11.25□□□□□ -0.61
TSPAN9-207ENST00000539631 EFCAB9A8MZ26 197 aa11.25□□□□□ -0.61
TSPAN9-207ENST00000539631 BLOC1S5-TXNDC5H3BN57 136 aa11.25□□□□□ -0.61
TSPAN9-207ENST00000539631 TNFRSF11BO00300 401 aa11.25□□□□□ -0.61
TSPAN9-207ENST00000539631 RNF13O43567 381 aa11.25□□□□□ -0.61
TSPAN9-207ENST00000539631 TRAF3IP2O43734 574 aaPredicted RBP11.25□□□□□ -0.61
TSPAN9-207ENST00000539631 FKBP6O75344 327 aa11.25□□□□□ -0.61
TSPAN9-207ENST00000539631 SERPINI2O75830 405 aa11.25□□□□□ -0.61
TSPAN9-207ENST00000539631 CST1P01037 141 aa11.25□□□□□ -0.61
TSPAN9-207ENST00000539631 IGHV3-9P01782 118 aa11.25□□□□□ -0.61
TSPAN9-207ENST00000539631 SAGP10523 405 aaPredicted RBP11.25□□□□□ -0.61
TSPAN9-207ENST00000539631 POU2F1P14859 743 aa11.25□□□□□ -0.61
TSPAN9-207ENST00000539631 CD79BP40259 229 aa11.25□□□□□ -0.61
TSPAN9-207ENST00000539631 AQP2P41181 271 aa11.25□□□□□ -0.61
TSPAN9-207ENST00000539631 OMPP47874 163 aa11.25□□□□□ -0.61
TSPAN9-207ENST00000539631 LIMS1P48059 325 aa11.25□□□□□ -0.61
TSPAN9-207ENST00000539631 SELENOPP49908 381 aa11.25□□□□□ -0.61
TSPAN9-207ENST00000539631 POU3F1Q03052 451 aaPredicted RBP11.25□□□□□ -0.61
TSPAN9-207ENST00000539631 RPL18Q07020 188 aaKnown RBP11.25□□□□□ -0.61
TSPAN9-207ENST00000539631 FAM27E3Q08E93 113 aa11.25□□□□□ -0.61
TSPAN9-207ENST00000539631 OR2T5Q6IEZ7 315 aa11.25□□□□□ -0.61
TSPAN9-207ENST00000539631 NIPAL3Q6P499 406 aa11.25□□□□□ -0.61
TSPAN9-207ENST00000539631 NHLRC1Q6VVB1 395 aa11.25□□□□□ -0.61
TSPAN9-207ENST00000539631 BEND4Q6ZU67 534 aa11.25□□□□□ -0.61
TSPAN9-207ENST00000539631 TMPRSS11FQ6ZWK6 438 aa11.25□□□□□ -0.61
TSPAN9-207ENST00000539631 OR4C15Q8NGM1 316 aa11.25□□□□□ -0.61
TSPAN9-207ENST00000539631 OR13C2Q8NGS9 318 aa11.25□□□□□ -0.61
TSPAN9-207ENST00000539631 OR2T29Q8NH02 315 aa11.25□□□□□ -0.61
TSPAN9-207ENST00000539631 MOSPD2Q8NHP6 518 aa11.25□□□□□ -0.61
TSPAN9-207ENST00000539631 APH1AQ96BI3 265 aa11.25□□□□□ -0.61
TSPAN9-207ENST00000539631 FANCFQ9NPI8 374 aa11.25□□□□□ -0.61
TSPAN9-207ENST00000539631 CCM2LQ9NUG4 571 aaPredicted RBP11.25□□□□□ -0.61
TSPAN9-207ENST00000539631 FOXD3Q9UJU5 478 aaPredicted RBP11.25□□□□□ -0.61
TSPAN9-207ENST00000539631 TMCC3Q9ULS5 477 aa11.25□□□□□ -0.61
TSPAN9-207ENST00000539631 TMEM5Q9Y2B1 443 aa11.25□□□□□ -0.61
TSPAN9-207ENST00000539631 LYVE1Q9Y5Y7 322 aa11.25□□□□□ -0.61
TSPAN9-207ENST00000539631 COL12A1Q99715 3063 aa11.25□□□□□ -0.61
TSPAN9-207ENST00000539631 TRAV27A0A087WT01 109 aa11.24□□□□□ -0.61
TSPAN9-207ENST00000539631 CDC42EP2O14613 210 aa11.24□□□□□ -0.61
TSPAN9-207ENST00000539631 KRT36O76013 467 aa11.24□□□□□ -0.61
TSPAN9-207ENST00000539631 ADAP00813 363 aa11.24□□□□□ -0.61
TSPAN9-207ENST00000539631 TSPAN19P0C672 248 aa11.24□□□□□ -0.61
TSPAN9-207ENST00000539631 IGFBP2P18065 325 aa11.24□□□□□ -0.61
TSPAN9-207ENST00000539631 HMGA2P52926 109 aa11.24□□□□□ -0.61
TSPAN9-207ENST00000539631 LAPTM4AQ15012 233 aa11.24□□□□□ -0.61
TSPAN9-207ENST00000539631 TSPO2Q5TGU0 170 aa11.24□□□□□ -0.61
TSPAN9-207ENST00000539631 MEX3BQ6ZN04 569 aaKnown RBP11.24□□□□□ -0.61
TSPAN9-207ENST00000539631 YTHDF3Q7Z739 585 aaKnown RBP11.24□□□□□ -0.61
TSPAN9-207ENST00000539631 PXKQ7Z7A4 578 aa11.24□□□□□ -0.61
TSPAN9-207ENST00000539631 ZER1Q7Z7L7 766 aa11.24□□□□□ -0.61
TSPAN9-207ENST00000539631 WDFY1Q8IWB7 410 aa11.24□□□□□ -0.61
TSPAN9-207ENST00000539631 GABRG1Q8N1C3 465 aa11.24□□□□□ -0.61
TSPAN9-207ENST00000539631 UBE2J2Q8N2K1 259 aa11.24□□□□□ -0.61
TSPAN9-207ENST00000539631 PAPD5Q8NDF8 572 aaKnown RBP11.24□□□□□ -0.61
TSPAN9-207ENST00000539631 OR51A7Q8NH64 312 aa11.24□□□□□ -0.61
TSPAN9-207ENST00000539631 TXNDC15Q96J42 360 aa11.24□□□□□ -0.61
TSPAN9-207ENST00000539631 TNFRSF13CQ96RJ3 184 aa11.24□□□□□ -0.61
TSPAN9-207ENST00000539631 GPA33Q99795 319 aa11.24□□□□□ -0.61
TSPAN9-207ENST00000539631 EMC6Q9BV81 110 aa11.24□□□□□ -0.61
TSPAN9-207ENST00000539631 ENKD1Q9H0I2 346 aa11.24□□□□□ -0.61
TSPAN9-207ENST00000539631 REEP1Q9H902 201 aa11.24□□□□□ -0.61
TSPAN9-207ENST00000539631 PARPBPQ9NWS1 579 aa11.24□□□□□ -0.61
TSPAN9-207ENST00000539631 MED29Q9NX70 200 aa11.24□□□□□ -0.61
TSPAN9-207ENST00000539631 ELOVL5Q9NYP7 299 aa11.24□□□□□ -0.61
TSPAN9-207ENST00000539631 HIF3AQ9Y2N7 669 aa11.24□□□□□ -0.61
TSPAN9-207ENST00000539631 SAMHD1Q9Y3Z3 626 aaKnown RBP11.24□□□□□ -0.61
TSPAN9-207ENST00000539631 NOX1Q9Y5S8 564 aa11.24□□□□□ -0.61
TSPAN9-207ENST00000539631 U3KQV3 271 aa11.24□□□□□ -0.61
TSPAN9-207ENST00000539631 USP9XQ93008 2570 aaPredicted RBP11.24□□□□□ -0.61
TSPAN9-207ENST00000539631 DOPEY2Q9Y3R5 2298 aa11.24□□□□□ -0.61
TSPAN9-207ENST00000539631 OR10H3O60404 316 aa11.23□□□□□ -0.61
TSPAN9-207ENST00000539631 ZNF432O94892 652 aa11.23□□□□□ -0.61
TSPAN9-207ENST00000539631 F13BP05160 661 aa11.23□□□□□ -0.61
TSPAN9-207ENST00000539631 IFNGR1P15260 489 aa11.23□□□□□ -0.61
TSPAN9-207ENST00000539631 SLC9A3P48764 834 aa11.23□□□□□ -0.61
TSPAN9-207ENST00000539631 FOXG1P55316 489 aaPredicted RBP11.23□□□□□ -0.61
TSPAN9-207ENST00000539631 RPS4XP62701 263 aaKnown RBP11.23□□□□□ -0.61
TSPAN9-207ENST00000539631 LGALS3BPQ08380 585 aa11.23□□□□□ -0.61
TSPAN9-207ENST00000539631 FHL1Q13642 323 aa11.23□□□□□ -0.61
TSPAN9-207ENST00000539631 MELKQ14680 651 aa11.23□□□□□ -0.61
TSPAN9-207ENST00000539631 KPNB1Q14974 876 aaKnown RBP11.23□□□□□ -0.61
TSPAN9-207ENST00000539631 TSC22D1Q15714 1073 aa11.23□□□□□ -0.61
TSPAN9-207ENST00000539631 FBXW9Q5XUX1 488 aa11.23□□□□□ -0.61
TSPAN9-207ENST00000539631 SLC35D2Q76EJ3 337 aa11.23□□□□□ -0.61
TSPAN9-207ENST00000539631 OAFQ86UD1 273 aa11.23□□□□□ -0.61
TSPAN9-207ENST00000539631 CXorf67Q86X51 503 aaPredicted RBP11.23□□□□□ -0.61
TSPAN9-207ENST00000539631 DMRTC2Q8IXT2 367 aaPredicted RBP11.23□□□□□ -0.61
TSPAN9-207ENST00000539631 ACBD4Q8NC06 268 aa11.23□□□□□ -0.61
TSPAN9-207ENST00000539631 ANKK1Q8NFD2 765 aa11.23□□□□□ -0.61
TSPAN9-207ENST00000539631 OR9Q2Q8NGE9 314 aa11.23□□□□□ -0.61
TSPAN9-207ENST00000539631 OR2M2Q96R28 347 aa11.23□□□□□ -0.61
TSPAN9-207ENST00000539631 SLCO5A1Q9H2Y9 848 aa11.23□□□□□ -0.61
TSPAN9-207ENST00000539631 KRCC1Q9NPI7 259 aaPredicted RBP11.23□□□□□ -0.61
TSPAN9-207ENST00000539631 SLC7A10Q9NS82 523 aa11.23□□□□□ -0.61
TSPAN9-207ENST00000539631 UPB1Q9UBR1 384 aa11.23□□□□□ -0.61
TSPAN9-207ENST00000539631 RCE1Q9Y256 329 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms