RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 TRBV9A0A0B4J1U6 114 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 A0A0J9YVX5 310 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 TSPAN11A1L157 253 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 TMEM213A2RRL7 107 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 METTL21EPA6NDL7 271 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 PRR23AA6NEV1 266 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 C11orf98E9PRG8 122 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 H0YCG3 227 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 LSM1O15116 133 aaKnown RBP0.79□□□□□ -2.28
HIF1A-204ENST00000539097 HDAC3O15379 428 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 UGT2B11O75310 529 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 SH3BGRLO75368 114 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 SRSF10O75494 262 aaKnown RBP0.79□□□□□ -2.28
HIF1A-204ENST00000539097 GPX5O75715 221 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 LYPD3O95274 346 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 TSPAN13O95857 204 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 ALOX5P09917 674 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 ZDHHC11BP0C7U3 371 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 UMPSP11172 480 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 PRG2P13727 222 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 PVRP15151 417 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 BCL3P20749 454 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 PDHA2P29803 388 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 BTCP35070 178 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 GLP1RP43220 463 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 MAGEA1P43355 309 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 SYKP43405 635 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 MRPL19P49406 292 aaKnown RBP0.79□□□□□ -2.28
HIF1A-204ENST00000539097 SLC26A2P50443 739 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 PLA2G16P53816 162 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 DAOAP59103 153 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 NUCB2P80303 420 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 LRRC63Q05C16 580 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 BST1Q10588 318 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 DDX39BQ13838 428 aaKnown RBP0.79□□□□□ -2.28
HIF1A-204ENST00000539097 ITIH4Q14624 930 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 MRPL23Q16540 153 aaKnown RBP0.79□□□□□ -2.28
HIF1A-204ENST00000539097 CARTPTQ16568 116 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 TEX44Q53QW1 395 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 FBXO48Q5FWF7 155 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 SLC22A10Q63ZE4 541 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 EMBQ6PCB8 327 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 HSD11B1LQ7Z5J1 315 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 CADM2Q8N3J6 435 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 LIX1Q8N485 282 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 Q8NBF4 154 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 OR1N2Q8NGR9 330 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 CNIH3Q8TBE1 160 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 BLOC1S5Q8TDH9 187 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 TOMM40LQ969M1 308 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 YIPF5Q969M3 257 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 IFT74Q96LB3 600 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 TSSK3Q96PN8 268 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 TBX15Q96SF7 602 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 NRTNQ99748 197 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 SLC6A7Q99884 636 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 ANP32EQ9BTT0 268 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 CCDC94Q9BW85 323 aaPredicted RBP0.79□□□□□ -2.28
HIF1A-204ENST00000539097 IL22Q9GZX6 179 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 NT5MQ9NPB1 228 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 DCAF13Q9NV06 445 aaKnown RBP0.79□□□□□ -2.28
HIF1A-204ENST00000539097 C1orf123Q9NWV4 160 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 DHRS4-AS1Q9P1J3 65 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 PRODH2Q9UF12 536 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 BAIAP2L1Q9UHR4 511 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 AUP1Q9Y679 476 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 DOCK8Q8NF50 2099 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 IGKV1D-8A0A087WSZ0 117 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 A0A1B0GTQ1 180 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 LRP5LA4QPB2 252 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 ARHGEF35A5YM69 484 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 KRTAP9-6A8MVA2 160 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 EIF3HO15372 352 aaKnown RBP eCLIP0.79□□□□□ -2.28
HIF1A-204ENST00000539097 KDELR3O43731 214 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 CXCL13O43927 109 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 CRLF1O75462 422 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 ERLIN1O75477 346 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 PDE5AO76074 875 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 DUSP14O95147 198 aaKnown RBP0.79□□□□□ -2.28
HIF1A-204ENST00000539097 JCHAINP01591 159 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 CALCBP10092 127 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 PRKACGP22612 351 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 PSMB5P28074 263 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 SPAM1P38567 509 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 RORCP51449 518 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 SLC7A2P52569 658 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 AIF1P55008 147 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 IRF8Q02556 426 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 REG3AQ06141 175 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 CD47Q08722 323 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 SRSF5Q13243 272 aaKnown RBP0.79□□□□□ -2.28
HIF1A-204ENST00000539097 ILKQ13418 452 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 XRCC4Q13426 336 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 KIR2DS1Q14954 304 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 PPP1R7Q15435 360 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 DUSP7Q16829 419 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 CEP85LQ5SZL2 805 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 PMF1Q6P1K2 205 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 PAQR6Q6TCH4 344 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 PAMR1Q6UXH9 720 aa0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms