RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 TTC36A6NLP5 189 aa7.8□□□□□ -1.16
CPSF7-217ENST00000537162 NPIPB9F8W1W9 429 aa7.8□□□□□ -1.16
CPSF7-217ENST00000537162 PCDH7O60245 1069 aa7.8□□□□□ -1.16
CPSF7-217ENST00000537162 BCAS1O75363 584 aaPredicted RBP7.8□□□□□ -1.16
CPSF7-217ENST00000537162 SLC43A1O75387 559 aa7.8□□□□□ -1.16
CPSF7-217ENST00000537162 LHBP01229 141 aa7.8□□□□□ -1.16
CPSF7-217ENST00000537162 MT-ND5P03915 603 aa7.8□□□□□ -1.16
CPSF7-217ENST00000537162 UBL4AP11441 157 aa7.8□□□□□ -1.16
CPSF7-217ENST00000537162 CCL2P13500 99 aa7.8□□□□□ -1.16
CPSF7-217ENST00000537162 PTDSS1P48651 473 aaKnown RBP7.8□□□□□ -1.16
CPSF7-217ENST00000537162 SH3BGRP55822 239 aaPredicted RBP7.8□□□□□ -1.16
CPSF7-217ENST00000537162 BTG1P62324 171 aa7.8□□□□□ -1.16
CPSF7-217ENST00000537162 SLC35A1P78382 337 aa7.8□□□□□ -1.16
CPSF7-217ENST00000537162 COX10Q12887 443 aa7.8□□□□□ -1.16
CPSF7-217ENST00000537162 TRAF3Q13114 568 aa7.8□□□□□ -1.16
CPSF7-217ENST00000537162 HABP2Q14520 560 aaPredicted RBP7.8□□□□□ -1.16
CPSF7-217ENST00000537162 PFKFB4Q16877 469 aa7.8□□□□□ -1.16
CPSF7-217ENST00000537162 CEACAM16Q2WEN9 425 aa7.8□□□□□ -1.16
CPSF7-217ENST00000537162 EXOSC6Q5RKV6 272 aaKnown RBP7.8□□□□□ -1.16
CPSF7-217ENST00000537162 TTC27Q6P3X3 843 aa7.8□□□□□ -1.16
CPSF7-217ENST00000537162 CREB3L2Q70SY1 520 aa7.8□□□□□ -1.16
CPSF7-217ENST00000537162 EPHX4Q8IUS5 362 aa7.8□□□□□ -1.16
CPSF7-217ENST00000537162 COX18Q8N8Q8 333 aa7.8□□□□□ -1.16
CPSF7-217ENST00000537162 STAG3L4Q8TBR4 150 aa7.8□□□□□ -1.16
CPSF7-217ENST00000537162 ADAMTS16Q8TE57 1224 aa7.8□□□□□ -1.16
CPSF7-217ENST00000537162 CDS1Q92903 461 aa7.8□□□□□ -1.16
CPSF7-217ENST00000537162 LHX4Q969G2 390 aa7.8□□□□□ -1.16
CPSF7-217ENST00000537162 NSUN5Q96P11 429 aaKnown RBP7.8□□□□□ -1.16
CPSF7-217ENST00000537162 CITED4Q96RK1 184 aa7.8□□□□□ -1.16
CPSF7-217ENST00000537162 NAA11Q9BSU3 229 aaPredicted RBP7.8□□□□□ -1.16
CPSF7-217ENST00000537162 LINC00470Q9BZP3 86 aa7.8□□□□□ -1.16
CPSF7-217ENST00000537162 PCDHAC1Q9H158 963 aa7.8□□□□□ -1.16
CPSF7-217ENST00000537162 NANOGQ9H9S0 305 aa7.8□□□□□ -1.16
CPSF7-217ENST00000537162 TMEM106BQ9NUM4 274 aa7.8□□□□□ -1.16
CPSF7-217ENST00000537162 SLCO1C1Q9NYB5 712 aa7.8□□□□□ -1.16
CPSF7-217ENST00000537162 ZNRD1Q9P1U0 126 aa7.8□□□□□ -1.16
CPSF7-217ENST00000537162 SLC7A8Q9UHI5 535 aa7.8□□□□□ -1.16
CPSF7-217ENST00000537162 A0A1B0GW55 424 aa7.79□□□□□ -1.16
CPSF7-217ENST00000537162 GNG14A0A1W2PPG7 69 aa7.79□□□□□ -1.16
CPSF7-217ENST00000537162 C22orf46C9J442 243 aa7.79□□□□□ -1.16
CPSF7-217ENST00000537162 RPL36A-HNRNPH2H7BZ11 118 aa7.79□□□□□ -1.16
CPSF7-217ENST00000537162 EIF4E2O60573 245 aaKnown RBP7.79□□□□□ -1.16
CPSF7-217ENST00000537162 EIF1BO60739 113 aaKnown RBP7.79□□□□□ -1.16
CPSF7-217ENST00000537162 ZNF205O95201 554 aa7.79□□□□□ -1.16
CPSF7-217ENST00000537162 PATE4P0C8F1 98 aa7.79□□□□□ -1.16
CPSF7-217ENST00000537162 DUX4L2P0CJ85 424 aa7.79□□□□□ -1.16
CPSF7-217ENST00000537162 DUX4L3P0CJ86 424 aa7.79□□□□□ -1.16
CPSF7-217ENST00000537162 DUX4L5P0CJ88 424 aa7.79□□□□□ -1.16
CPSF7-217ENST00000537162 DUX4L6P0CJ89 424 aa7.79□□□□□ -1.16
CPSF7-217ENST00000537162 DUX4L7P0CJ90 424 aa7.79□□□□□ -1.16
CPSF7-217ENST00000537162 APOBEC1P41238 236 aaKnown RBP7.79□□□□□ -1.16
CPSF7-217ENST00000537162 SERPINB4P48594 390 aa7.79□□□□□ -1.16
CPSF7-217ENST00000537162 MMP15P51511 669 aa7.79□□□□□ -1.16
CPSF7-217ENST00000537162 P2RY4P51582 365 aa7.79□□□□□ -1.16
CPSF7-217ENST00000537162 SLC12A2P55011 1212 aa7.79□□□□□ -1.16
CPSF7-217ENST00000537162 POU6F2P78424 691 aaPredicted RBP7.79□□□□□ -1.16
CPSF7-217ENST00000537162 HSPB3Q12988 150 aa7.79□□□□□ -1.16
CPSF7-217ENST00000537162 IFT88Q13099 833 aa7.79□□□□□ -1.16
CPSF7-217ENST00000537162 HEPACAMQ14CZ8 416 aa7.79□□□□□ -1.16
CPSF7-217ENST00000537162 SPA17Q15506 151 aa7.79□□□□□ -1.16
CPSF7-217ENST00000537162 VPS26BQ4G0F5 336 aa7.79□□□□□ -1.16
CPSF7-217ENST00000537162 FAM209AQ5JX71 171 aa7.79□□□□□ -1.16
CPSF7-217ENST00000537162 COX20Q5RI15 118 aa7.79□□□□□ -1.16
CPSF7-217ENST00000537162 PHYHD1Q5SRE7 291 aa7.79□□□□□ -1.16
CPSF7-217ENST00000537162 DUX4L9Q6RFH8 374 aaPredicted RBP7.79□□□□□ -1.16
CPSF7-217ENST00000537162 KLBQ86Z14 1044 aa7.79□□□□□ -1.16
CPSF7-217ENST00000537162 SBSPONQ8IVN8 264 aa7.79□□□□□ -1.16
CPSF7-217ENST00000537162 SCCPDHQ8NBX0 429 aa7.79□□□□□ -1.16
CPSF7-217ENST00000537162 FGFBP3Q8TAT2 258 aa7.79□□□□□ -1.16
CPSF7-217ENST00000537162 MGARPQ8TDB4 240 aa7.79□□□□□ -1.16
CPSF7-217ENST00000537162 WIPF2Q8TF74 440 aaPredicted RBP7.79□□□□□ -1.16
CPSF7-217ENST00000537162 TFAP2CQ92754 450 aa7.79□□□□□ -1.16
CPSF7-217ENST00000537162 RHOJQ9H4E5 214 aa7.79□□□□□ -1.16
CPSF7-217ENST00000537162 DUX4Q9UBX2 424 aa7.79□□□□□ -1.16
CPSF7-217ENST00000537162 KCNE5Q9UJ90 142 aa7.79□□□□□ -1.16
CPSF7-217ENST00000537162 DTNAQ9Y4J8 743 aa7.79□□□□□ -1.16
CPSF7-217ENST00000537162 KCNE3Q9Y6H6 103 aa7.79□□□□□ -1.16
CPSF7-217ENST00000537162 TMEM72A0PK05 275 aa7.78□□□□□ -1.16
CPSF7-217ENST00000537162 H0YHG0 523 aa7.78□□□□□ -1.16
CPSF7-217ENST00000537162 H3BNH8 94 aa7.78□□□□□ -1.16
CPSF7-217ENST00000537162 P2RY10O00398 339 aa7.78□□□□□ -1.16
CPSF7-217ENST00000537162 PPP6CO00743 305 aa7.78□□□□□ -1.16
CPSF7-217ENST00000537162 TOX4O94842 621 aa7.78□□□□□ -1.16
CPSF7-217ENST00000537162 IFNW1P05000 195 aa7.78□□□□□ -1.16
CPSF7-217ENST00000537162 LCKP06239 509 aa7.78□□□□□ -1.16
CPSF7-217ENST00000537162 RPS2P15880 293 aaKnown RBP7.78□□□□□ -1.16
CPSF7-217ENST00000537162 DDCP20711 480 aa7.78□□□□□ -1.16
CPSF7-217ENST00000537162 GIPRP48546 466 aa7.78□□□□□ -1.16
CPSF7-217ENST00000537162 FNTAP49354 379 aa7.78□□□□□ -1.16
CPSF7-217ENST00000537162 ATP12AP54707 1039 aa7.78□□□□□ -1.16
CPSF7-217ENST00000537162 SELENOVP59797 346 aa7.78□□□□□ -1.16
CPSF7-217ENST00000537162 C2orf80Q0P641 193 aa7.78□□□□□ -1.16
CPSF7-217ENST00000537162 ARHGAP11BQ3KRB8 267 aa7.78□□□□□ -1.16
CPSF7-217ENST00000537162 TEX35Q5T0J7 233 aa7.78□□□□□ -1.16
CPSF7-217ENST00000537162 PDZK1Q5T2W1 519 aa7.78□□□□□ -1.16
CPSF7-217ENST00000537162 C11orf88Q6PI97 169 aa7.78□□□□□ -1.16
CPSF7-217ENST00000537162 RPS27LQ71UM5 84 aaKnown RBP7.78□□□□□ -1.16
CPSF7-217ENST00000537162 SZRD1Q7Z422 152 aa7.78□□□□□ -1.16
CPSF7-217ENST00000537162 COMTD1Q86VU5 262 aa7.78□□□□□ -1.16
CPSF7-217ENST00000537162 CALHM3Q86XJ0 350 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms