RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 ZXDAP98168 799 aa12.32□□□□□ -0.44
SMG6-203ENST00000536871 IFITM2Q01629 132 aa12.32□□□□□ -0.44
SMG6-203ENST00000536871 LTBQ06643 244 aa12.32□□□□□ -0.44
SMG6-203ENST00000536871 EGR3Q06889 387 aa12.32□□□□□ -0.44
SMG6-203ENST00000536871 YIF1BQ5BJH7 314 aa12.32□□□□□ -0.44
SMG6-203ENST00000536871 ZMAT1Q5H9K5 638 aa12.32□□□□□ -0.44
SMG6-203ENST00000536871 TRIQKQ629K1 86 aa12.32□□□□□ -0.44
SMG6-203ENST00000536871 ZNF385CQ66K41 422 aaPredicted RBP12.32□□□□□ -0.44
SMG6-203ENST00000536871 DESI1Q6ICB0 168 aa12.32□□□□□ -0.44
SMG6-203ENST00000536871 MZT2BQ6NZ67 158 aa12.32□□□□□ -0.44
SMG6-203ENST00000536871 CNIH2Q6PI25 160 aa12.32□□□□□ -0.44
SMG6-203ENST00000536871 PAPD4Q6PIY7 484 aaKnown RBP12.32□□□□□ -0.44
SMG6-203ENST00000536871 TSSK4Q6SA08 328 aa12.32□□□□□ -0.44
SMG6-203ENST00000536871 CPEB2Q7Z5Q1 589 aaKnown RBP12.32□□□□□ -0.44
SMG6-203ENST00000536871 DEPDC7Q96QD5 511 aa12.32□□□□□ -0.44
SMG6-203ENST00000536871 RNF32Q9H0A6 362 aa12.32□□□□□ -0.44
SMG6-203ENST00000536871 PPP1R3EQ9H7J1 279 aa12.32□□□□□ -0.44
SMG6-203ENST00000536871 RPRD1BQ9NQG5 326 aaKnown RBP12.32□□□□□ -0.44
SMG6-203ENST00000536871 C14orf119Q9NWQ9 140 aa12.32□□□□□ -0.44
SMG6-203ENST00000536871 FKBP7Q9Y680 259 aa12.32□□□□□ -0.44
SMG6-203ENST00000536871 TP53BP1Q12888 1972 aaPredicted RBP12.32□□□□□ -0.44
SMG6-203ENST00000536871 ABCA7Q8IZY2 2146 aa12.32□□□□□ -0.44
SMG6-203ENST00000536871 TRBV2A0A0J9YWF9 115 aa12.31□□□□□ -0.44
SMG6-203ENST00000536871 E9PI62 339 aa12.31□□□□□ -0.44
SMG6-203ENST00000536871 SYPP08247 313 aa12.31□□□□□ -0.44
SMG6-203ENST00000536871 UCHL1P09936 223 aa12.31□□□□□ -0.44
SMG6-203ENST00000536871 RAB3BP20337 219 aa12.31□□□□□ -0.44
SMG6-203ENST00000536871 M6PRP20645 277 aa12.31□□□□□ -0.44
SMG6-203ENST00000536871 EDNRAP25101 427 aa12.31□□□□□ -0.44
SMG6-203ENST00000536871 MAPK3P27361 379 aaPredicted RBP12.31□□□□□ -0.44
SMG6-203ENST00000536871 RBMS1P29558 406 aaKnown RBP12.31□□□□□ -0.44
SMG6-203ENST00000536871 NAA10P41227 235 aaPredicted RBP12.31□□□□□ -0.44
SMG6-203ENST00000536871 RPS5P46782 204 aaKnown RBP12.31□□□□□ -0.44
SMG6-203ENST00000536871 E2F1Q01094 437 aa12.31□□□□□ -0.44
SMG6-203ENST00000536871 CD300CQ08708 224 aa12.31□□□□□ -0.44
SMG6-203ENST00000536871 TP53I3Q53FA7 332 aa12.31□□□□□ -0.44
SMG6-203ENST00000536871 EEF1A1P5Q5VTE0 462 aa12.31□□□□□ -0.44
SMG6-203ENST00000536871 C1orf140Q5VVS0 124 aa12.31□□□□□ -0.44
SMG6-203ENST00000536871 PWWP2BQ6NUJ5 590 aa12.31□□□□□ -0.44
SMG6-203ENST00000536871 SFXN4Q6P4A7 337 aa12.31□□□□□ -0.44
SMG6-203ENST00000536871 TMEM205Q6UW68 189 aa12.31□□□□□ -0.44
SMG6-203ENST00000536871 BAIAP2L2Q6UXY1 529 aa12.31□□□□□ -0.44
SMG6-203ENST00000536871 ZNF248Q8NDW4 579 aa12.31□□□□□ -0.44
SMG6-203ENST00000536871 SLC22A8Q8TCC7 542 aa12.31□□□□□ -0.44
SMG6-203ENST00000536871 RNF138Q8WVD3 245 aa12.31□□□□□ -0.44
SMG6-203ENST00000536871 KLHL15Q96M94 604 aa12.31□□□□□ -0.44
SMG6-203ENST00000536871 GFM1Q96RP9 751 aaKnown RBP12.31□□□□□ -0.44
SMG6-203ENST00000536871 DCLRE1CQ96SD1 692 aaKnown RBP12.31□□□□□ -0.44
SMG6-203ENST00000536871 ZCCHC4Q9H5U6 513 aa12.31□□□□□ -0.44
SMG6-203ENST00000536871 MARCH7Q9H992 704 aa12.31□□□□□ -0.44
SMG6-203ENST00000536871 MRPL39Q9NYK5 338 aaKnown RBP12.31□□□□□ -0.44
SMG6-203ENST00000536871 GNG8Q9UK08 70 aa12.31□□□□□ -0.44
SMG6-203ENST00000536871 TBC1D24Q9ULP9 559 aa12.31□□□□□ -0.44
SMG6-203ENST00000536871 EML5Q05BV3 1969 aa12.31□□□□□ -0.44
SMG6-203ENST00000536871 A0A1W2PQ09 198 aa12.31□□□□□ -0.44
SMG6-203ENST00000536871 NPIPB13A6NJU9 1138 aa12.31□□□□□ -0.44
SMG6-203ENST00000536871 NPIPB4C9JG80 1138 aa12.31□□□□□ -0.44
SMG6-203ENST00000536871 ZNF208O43345 1280 aa12.31□□□□□ -0.44
SMG6-203ENST00000536871 PRKNO60260 465 aaPredicted RBP12.31□□□□□ -0.44
SMG6-203ENST00000536871 DXOO77932 396 aaKnown RBP12.31□□□□□ -0.44
SMG6-203ENST00000536871 CFIP05156 583 aa12.31□□□□□ -0.44
SMG6-203ENST00000536871 SLC2A2P11168 524 aaPredicted RBP12.31□□□□□ -0.44
SMG6-203ENST00000536871 HOXD11P31277 338 aaPredicted RBP12.31□□□□□ -0.44
SMG6-203ENST00000536871 DAB2P98082 770 aa12.31□□□□□ -0.44
SMG6-203ENST00000536871 CSTF1Q05048 431 aaKnown RBP12.31□□□□□ -0.44
SMG6-203ENST00000536871 SIGLEC14Q08ET2 396 aa12.31□□□□□ -0.44
SMG6-203ENST00000536871 BAK1Q16611 211 aa12.31□□□□□ -0.44
SMG6-203ENST00000536871 IDNKQ5T6J7 187 aa12.31□□□□□ -0.44
SMG6-203ENST00000536871 FAM205BPQ63HN1 556 aa12.31□□□□□ -0.44
SMG6-203ENST00000536871 SIGIRRQ6IA17 410 aa12.31□□□□□ -0.44
SMG6-203ENST00000536871 UNQ9370/PRO34162Q6UXP9 181 aa12.31□□□□□ -0.44
SMG6-203ENST00000536871 SSX6Q7RTT6 188 aa12.31□□□□□ -0.44
SMG6-203ENST00000536871 TMPRSS9Q7Z410 1059 aa12.31□□□□□ -0.44
SMG6-203ENST00000536871 RAB43Q86YS6 212 aa12.31□□□□□ -0.44
SMG6-203ENST00000536871 IFI44Q8TCB0 444 aa12.31□□□□□ -0.44
SMG6-203ENST00000536871 ASB17Q8WXJ9 295 aa12.31□□□□□ -0.44
SMG6-203ENST00000536871 TRIM63Q969Q1 353 aa12.31□□□□□ -0.44
SMG6-203ENST00000536871 TSPAN32Q96QS1 320 aa12.31□□□□□ -0.44
SMG6-203ENST00000536871 PHOX2BQ99453 314 aa12.31□□□□□ -0.44
SMG6-203ENST00000536871 WDR76Q9H967 626 aa12.31□□□□□ -0.44
SMG6-203ENST00000536871 TIGARQ9NQ88 270 aa12.31□□□□□ -0.44
SMG6-203ENST00000536871 CYSLTR2Q9NS75 346 aa12.31□□□□□ -0.44
SMG6-203ENST00000536871 POU2F3Q9UKI9 436 aa12.31□□□□□ -0.44
SMG6-203ENST00000536871 ZNF281Q9Y2X9 895 aa12.31□□□□□ -0.44
SMG6-203ENST00000536871 SHISA3A0PJX4 238 aa12.3□□□□□ -0.44
SMG6-203ENST00000536871 A6NIZ1 184 aa12.3□□□□□ -0.44
SMG6-203ENST00000536871 FAM25AB3EWG3 89 aa12.3□□□□□ -0.44
SMG6-203ENST00000536871 FAM25CB3EWG5 89 aa12.3□□□□□ -0.44
SMG6-203ENST00000536871 FAM25GB3EWG6 89 aa12.3□□□□□ -0.44
SMG6-203ENST00000536871 FLRT2O43155 660 aa12.3□□□□□ -0.44
SMG6-203ENST00000536871 LRRTM2O43300 516 aa12.3□□□□□ -0.44
SMG6-203ENST00000536871 SELENOFO60613 162 aa12.3□□□□□ -0.44
SMG6-203ENST00000536871 HPGDSO60760 199 aa12.3□□□□□ -0.44
SMG6-203ENST00000536871 ALX3O95076 343 aa12.3□□□□□ -0.44
SMG6-203ENST00000536871 KRT8P05787 483 aa12.3□□□□□ -0.44
SMG6-203ENST00000536871 CD63P08962 238 aa12.3□□□□□ -0.44
SMG6-203ENST00000536871 CSF3P09919 207 aa12.3□□□□□ -0.44
SMG6-203ENST00000536871 TRAPPC2P0DI81 140 aa12.3□□□□□ -0.44
SMG6-203ENST00000536871 TRAPPC2BP0DI82 140 aa12.3□□□□□ -0.44
SMG6-203ENST00000536871 ATXN8OSP0DMR3 200 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms