RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 CACNA1FO60840 1977 aa3.83□□□□□ -1.8
ITGB1-219ENST00000534049 DOCK7Q96N67 2140 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 MYH1P12882 1939 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 MYH2Q9UKX2 1941 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 DOCK2Q92608 1830 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 DDX60LQ5H9U9 1706 aaKnown RBP3.82□□□□□ -1.8
ITGB1-219ENST00000534049 A0A1B0GV72 72 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 FAM237BA0A1B0GVD1 139 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 PGPEP1LA6NFU8 196 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 NEMP2A6NFY4 417 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 CDRT15L2A8MXV6 281 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 B4DXG7 233 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 TEX22C9J3V5 150 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 NR5A2O00482 541 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 TP53I11O14683 189 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 MSH4O15457 936 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 ARPC5O15511 151 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 HPGDSO60760 199 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 KHDRBS3O75525 346 aaKnown RBP3.82□□□□□ -1.8
ITGB1-219ENST00000534049 WBP4O75554 376 aaKnown RBP3.82□□□□□ -1.8
ITGB1-219ENST00000534049 AKAP3O75969 853 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 ATG12O94817 140 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 KDM4BO94953 1096 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 CLDN14O95500 239 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 PRAMEF12O95522 483 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 HPRP00739 348 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 APOC3P02656 99 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 LIPFP07098 398 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 NBEAP1P0C6P0 100 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 SLC35E2BP0CK96 405 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 SLC35E2P0CK97 266 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 ANXA3P12429 323 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 TSPAN8P19075 237 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 CRHBPP24387 322 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 FASP25445 335 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 GTF2E2P29084 291 aaKnown RBP3.82□□□□□ -1.8
ITGB1-219ENST00000534049 EPHA8P29322 1005 aaPredicted RBP3.82□□□□□ -1.8
ITGB1-219ENST00000534049 SDC4P31431 198 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 FMO3P31513 532 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 SFNP31947 248 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 PIGAP37287 484 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 MAGEA3P43357 314 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 GABRA4P48169 554 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 KCNJ3P48549 501 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 NRIP1P48552 1158 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 RORCP51449 518 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 EMP2P54851 167 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 KLF3P57682 345 aaPredicted RBP3.82□□□□□ -1.8
ITGB1-219ENST00000534049 SNRPEP62304 92 aaKnown RBP3.82□□□□□ -1.8
ITGB1-219ENST00000534049 CSNK1G2P78368 415 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 ADARB1P78563 741 aaKnown RBP3.82□□□□□ -1.8
ITGB1-219ENST00000534049 DLK1P80370 383 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 EMX2Q04743 252 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 LCP2Q13094 533 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 SLAMF1Q13291 335 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 VGLL4Q14135 290 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 OR8G1Q15617 311 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 ATP6AP1Q15904 470 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 PSG3Q16557 428 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 BSXQ3C1V8 233 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 ADPRMQ3LIE5 342 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 TIMM50Q3ZCQ8 353 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 PIP5KL1Q5T9C9 394 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 C9orf135Q5VTT2 229 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 NXNL2Q5VZ03 156 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 FBXW9Q5XUX1 488 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 WSCD1Q658N2 575 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 LEMD1Q68G75 181 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 CYB5R2Q6BCY4 276 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 ETFRF1Q6IPR1 90 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 EIF5AL1Q6IS14 154 aaKnown RBP3.82□□□□□ -1.8
ITGB1-219ENST00000534049 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.82□□□□□ -1.8
ITGB1-219ENST00000534049 FAHD2BQ6P2I3 314 aaPredicted RBP3.82□□□□□ -1.8
ITGB1-219ENST00000534049 FBXO46Q6PJ61 603 aaPredicted RBP3.82□□□□□ -1.8
ITGB1-219ENST00000534049 HSDL2Q6YN16 418 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 C3P1Q6ZMU1 363 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 CHST3Q7LGC8 479 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 SLC46A3Q7Z3Q1 461 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 PIWIL4Q7Z3Z4 852 aaKnown RBP3.82□□□□□ -1.8
ITGB1-219ENST00000534049 ABHD12BQ7Z5M8 362 aaPredicted RBP3.82□□□□□ -1.8
ITGB1-219ENST00000534049 LHFPL4Q7Z7J7 247 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 NAA40Q86UY6 237 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 RANBP3LQ86VV4 465 aaPredicted RBP3.82□□□□□ -1.8
ITGB1-219ENST00000534049 COMMD2Q86X83 199 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 ZNF679Q8IYX0 411 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 LRRC18Q8N456 261 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 ZCCHC9Q8N567 271 aaKnown RBP3.82□□□□□ -1.8
ITGB1-219ENST00000534049 MS4A15Q8N5U1 240 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 ACBD7Q8N6N7 88 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 ZNF557Q8N988 423 aaPredicted RBP3.82□□□□□ -1.8
ITGB1-219ENST00000534049 ANKRD52Q8NB46 1076 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 BPIFCQ8NFQ6 507 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 DBF4BQ8NFT6 615 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 OR8D4Q8NGM9 314 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 OR2T4Q8NH00 348 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 OR2T11Q8NH01 316 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 OR2L2Q8NH16 312 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 TRMT10AQ8TBZ6 339 aaKnown RBP3.82□□□□□ -1.8
ITGB1-219ENST00000534049 LCN9Q8WX39 176 aa3.82□□□□□ -1.8
ITGB1-219ENST00000534049 PSMG2Q969U7 264 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms