RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 PXKQ7Z7A4 578 aa17.5■□□□□ 0.39
CPSF1-209ENST00000532725 OFCC1Q8IZS5 231 aa17.5■□□□□ 0.39
CPSF1-209ENST00000532725 POMGNT2Q8NAT1 580 aa17.5■□□□□ 0.39
CPSF1-209ENST00000532725 LIPHQ8WWY8 451 aa17.5■□□□□ 0.39
CPSF1-209ENST00000532725 PYURFQ96I23 114 aa17.5■□□□□ 0.39
CPSF1-209ENST00000532725 NSMCE2Q96MF7 247 aa17.5■□□□□ 0.39
CPSF1-209ENST00000532725 MUS81Q96NY9 551 aa17.5■□□□□ 0.39
CPSF1-209ENST00000532725 CLEC4MQ9H2X3 399 aaPredicted RBP17.5■□□□□ 0.39
CPSF1-209ENST00000532725 NDUFAF4Q9P032 175 aa17.5■□□□□ 0.39
CPSF1-209ENST00000532725 UPB1Q9UBR1 384 aa17.5■□□□□ 0.39
CPSF1-209ENST00000532725 MED31Q9Y3C7 131 aa17.5■□□□□ 0.39
CPSF1-209ENST00000532725 AKAP6Q13023 2319 aa17.49■□□□□ 0.39
CPSF1-209ENST00000532725 HRNRQ86YZ3 2850 aaPredicted RBP17.49■□□□□ 0.39
CPSF1-209ENST00000532725 ENO4A6NNW6 628 aa17.49■□□□□ 0.39
CPSF1-209ENST00000532725 UBOX5O94941 541 aa17.49■□□□□ 0.39
CPSF1-209ENST00000532725 SEMG1P04279 462 aa17.49■□□□□ 0.39
CPSF1-209ENST00000532725 ITGA5P08648 1049 aa17.49■□□□□ 0.39
CPSF1-209ENST00000532725 FUT1P19526 365 aa17.49■□□□□ 0.39
CPSF1-209ENST00000532725 DNAJA1P31689 397 aaKnown RBP17.49■□□□□ 0.39
CPSF1-209ENST00000532725 TRAM2Q15035 370 aa17.49■□□□□ 0.39
CPSF1-209ENST00000532725 TAB1Q15750 504 aa17.49■□□□□ 0.39
CPSF1-209ENST00000532725 NIPAL3Q6P499 406 aa17.49■□□□□ 0.39
CPSF1-209ENST00000532725 CDC20BQ86Y33 519 aa17.49■□□□□ 0.39
CPSF1-209ENST00000532725 UEVLDQ8IX04 471 aa17.49■□□□□ 0.39
CPSF1-209ENST00000532725 TXNDC15Q96J42 360 aa17.49■□□□□ 0.39
CPSF1-209ENST00000532725 NMNAT1Q9HAN9 279 aaPredicted RBP17.49■□□□□ 0.39
CPSF1-209ENST00000532725 TAS2R16Q9NYV7 291 aa17.49■□□□□ 0.39
CPSF1-209ENST00000532725 RCE1Q9Y256 329 aa17.49■□□□□ 0.39
CPSF1-209ENST00000532725 NOX1Q9Y5S8 564 aa17.49■□□□□ 0.39
CPSF1-209ENST00000532725 A0A1W2PPR1 153 aa17.48■□□□□ 0.39
CPSF1-209ENST00000532725 OR6C65A6NJZ3 312 aa17.48■□□□□ 0.39
CPSF1-209ENST00000532725 HIST1H2ABP04908 130 aa17.48■□□□□ 0.39
CPSF1-209ENST00000532725 ADORA3P0DMS8 318 aa17.48■□□□□ 0.39
CPSF1-209ENST00000532725 AHCYP23526 432 aa17.48■□□□□ 0.39
CPSF1-209ENST00000532725 LOXP28300 417 aaPredicted RBP17.48■□□□□ 0.39
CPSF1-209ENST00000532725 VLDLRP98155 873 aa17.48■□□□□ 0.39
CPSF1-209ENST00000532725 IL1RL1Q01638 556 aa17.48■□□□□ 0.39
CPSF1-209ENST00000532725 LGALS3BPQ08380 585 aa17.48■□□□□ 0.39
CPSF1-209ENST00000532725 GABRA6Q16445 453 aa17.48■□□□□ 0.39
CPSF1-209ENST00000532725 HIST3H2AQ7L7L0 130 aa17.48■□□□□ 0.39
CPSF1-209ENST00000532725 P2RY8Q86VZ1 359 aa17.48■□□□□ 0.39
CPSF1-209ENST00000532725 PIK3C3Q8NEB9 887 aa17.48■□□□□ 0.39
CPSF1-209ENST00000532725 HIST1H2ACQ93077 130 aa17.48■□□□□ 0.39
CPSF1-209ENST00000532725 SGTBQ96EQ0 304 aa17.48■□□□□ 0.39
CPSF1-209ENST00000532725 LINC00470Q9BZP3 86 aa17.48■□□□□ 0.39
CPSF1-209ENST00000532725 ACTR3BQ9P1U1 418 aa17.48■□□□□ 0.39
CPSF1-209ENST00000532725 PRPF19Q9UMS4 504 aaKnown RBP17.48■□□□□ 0.39
CPSF1-209ENST00000532725 CIB4A0PJX0 185 aa17.47■□□□□ 0.39
CPSF1-209ENST00000532725 HTR3EA5X5Y0 456 aa17.47■□□□□ 0.39
CPSF1-209ENST00000532725 UPK3AO75631 287 aa17.47■□□□□ 0.39
CPSF1-209ENST00000532725 OR7A10O76100 309 aa17.47■□□□□ 0.39
CPSF1-209ENST00000532725 OR6A2O95222 327 aa17.47■□□□□ 0.39
CPSF1-209ENST00000532725 TSPAN19P0C672 248 aa17.47■□□□□ 0.39
CPSF1-209ENST00000532725 RHCEP18577 417 aa17.47■□□□□ 0.39
CPSF1-209ENST00000532725 MPGP29372 298 aa17.47■□□□□ 0.39
CPSF1-209ENST00000532725 MS4A2Q01362 244 aa17.47■□□□□ 0.39
CPSF1-209ENST00000532725 POU3F1Q03052 451 aaPredicted RBP17.47■□□□□ 0.39
CPSF1-209ENST00000532725 TRIM25Q14258 630 aaKnown RBP17.47■□□□□ 0.39
CPSF1-209ENST00000532725 TIMM23BQ5SRD1 257 aa17.47■□□□□ 0.39
CPSF1-209ENST00000532725 TBPL2Q6SJ96 375 aa17.47■□□□□ 0.39
CPSF1-209ENST00000532725 LINGO2Q7L985 606 aa17.47■□□□□ 0.39
CPSF1-209ENST00000532725 CYP4Z1Q86W10 505 aa17.47■□□□□ 0.39
CPSF1-209ENST00000532725 WFDC8Q8IUA0 241 aa17.47■□□□□ 0.39
CPSF1-209ENST00000532725 WDFY1Q8IWB7 410 aa17.47■□□□□ 0.39
CPSF1-209ENST00000532725 RNF113BQ8IZP6 322 aaKnown RBP17.47■□□□□ 0.39
CPSF1-209ENST00000532725 OR2M2Q96R28 347 aa17.47■□□□□ 0.39
CPSF1-209ENST00000532725 PLEKHF2Q9H8W4 249 aa17.47■□□□□ 0.39
CPSF1-209ENST00000532725 FAM32AQ9Y421 112 aaKnown RBP17.47■□□□□ 0.39
CPSF1-209ENST00000532725 CSMD1Q96PZ7 3565 aa17.47■□□□□ 0.39
CPSF1-209ENST00000532725 CREBBPQ92793 2442 aa17.47■□□□□ 0.39
CPSF1-209ENST00000532725 CSMD2Q7Z408 3487 aa17.46■□□□□ 0.39
CPSF1-209ENST00000532725 A0A087WUU8 490 aa17.46■□□□□ 0.39
CPSF1-209ENST00000532725 OR5H1A6NKK0 313 aa17.46■□□□□ 0.39
CPSF1-209ENST00000532725 C11orf98E9PRG8 122 aa17.46■□□□□ 0.39
CPSF1-209ENST00000532725 hCG_2039718K7EN88 272 aa17.46■□□□□ 0.39
CPSF1-209ENST00000532725 PIP5K1CO60331 668 aa17.46■□□□□ 0.39
CPSF1-209ENST00000532725 SLC43A1O75387 559 aa17.46■□□□□ 0.39
CPSF1-209ENST00000532725 RAD51DO75771 328 aa17.46■□□□□ 0.39
CPSF1-209ENST00000532725 UMPSP11172 480 aa17.46■□□□□ 0.39
CPSF1-209ENST00000532725 PRKCDQ05655 676 aa17.46■□□□□ 0.39
CPSF1-209ENST00000532725 C9orf135Q5VTT2 229 aa17.46■□□□□ 0.39
CPSF1-209ENST00000532725 OR7E24Q6IFN5 339 aa17.46■□□□□ 0.39
CPSF1-209ENST00000532725 SEZ6L2Q6UXD5 910 aa17.46■□□□□ 0.39
CPSF1-209ENST00000532725 NRMQ8IXM6 262 aa17.46■□□□□ 0.39
CPSF1-209ENST00000532725 TMEM123Q8N131 208 aa17.46■□□□□ 0.39
CPSF1-209ENST00000532725 ACOT11Q8WXI4 607 aaPredicted RBP17.46■□□□□ 0.39
CPSF1-209ENST00000532725 NRGNQ92686 78 aa17.46■□□□□ 0.39
CPSF1-209ENST00000532725 SLC7A6OSQ96CW6 309 aaPredicted RBP17.46■□□□□ 0.39
CPSF1-209ENST00000532725 BPIFA2Q96DR5 249 aa17.46■□□□□ 0.39
CPSF1-209ENST00000532725 PIK3IP1Q96FE7 263 aa17.46■□□□□ 0.39
CPSF1-209ENST00000532725 BOD1Q96IK1 185 aa17.46■□□□□ 0.39
CPSF1-209ENST00000532725 EMC6Q9BV81 110 aa17.46■□□□□ 0.39
CPSF1-209ENST00000532725 ANKRD19PQ9H560 264 aa17.46■□□□□ 0.39
CPSF1-209ENST00000532725 MED29Q9NX70 200 aa17.46■□□□□ 0.39
CPSF1-209ENST00000532725 V9GYQ6 96 aa17.46■□□□□ 0.39
CPSF1-209ENST00000532725 A0A1W2PRQ8 180 aa17.45■□□□□ 0.38
CPSF1-209ENST00000532725 SLC35F4A4IF30 521 aa17.45■□□□□ 0.38
CPSF1-209ENST00000532725 BLOC1S5-TXNDC5H3BN57 136 aa17.45■□□□□ 0.38
CPSF1-209ENST00000532725 RPL36A-HNRNPH2H7BZ11 118 aa17.45■□□□□ 0.38
CPSF1-209ENST00000532725 KRT33AO76009 404 aa17.45■□□□□ 0.38
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