RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 DEFB133Q30KQ1 61 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 ACER2Q5QJU3 275 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 LYPLAL1Q5VWZ2 237 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 SUSD1Q6UWL2 747 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 TMEM207Q6UWW9 146 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 LRRC70Q7Z2Q7 622 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 PARGQ86W56 976 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 ZNF227Q86WZ6 799 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 CHST4Q8NCG5 386 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 OR52N2Q8NGI0 321 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 OR6K3Q8NGY3 331 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 TMED6Q8WW62 240 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 MOGAT1Q96PD6 335 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 HRASLSQ9HDD0 168 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 GSKIPQ9P0R6 139 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 PLEKHM1Q9Y4G2 1056 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 WIF1Q9Y5W5 379 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 PUS1Q9Y606 427 aaKnown RBP eCLIP6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 UNC13CQ8NB66 2214 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 ZNF236Q9UL36 1845 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 BORCS7-ASMTA0A0B4J1R7 106 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 TSPAN6O43657 245 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 RPN2P04844 631 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 ATXN1LP0C7T5 689 aaKnown RBP6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 AKAIN1P0CW23 69 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 ALDH3B1P43353 468 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 ACTBP60709 375 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 ACTG1P63261 375 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 GLDNQ6ZMI3 551 aaPredicted RBP6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 LILRA3Q8N6C8 439 aaPredicted RBP6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 FAM181AQ8N9Y4 354 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 POMGNT2Q8NAT1 580 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 OR5M1Q8NGP8 315 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 ZBTB8AQ96BR9 441 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 IL17FQ96PD4 163 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 PHB2Q99623 299 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 METTL9Q9H1A3 318 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 SYNPO2LQ9H987 977 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 IL26Q9NPH9 171 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 LRRC37A2A6NM11 1700 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 SPTBP11277 2137 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 RP1P56715 2156 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 DLL1O00548 723 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 GPR37O15354 613 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 DFFBO76075 338 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 AKR7A3O95154 331 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 OR2C1O95371 312 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 HLA-DQB1P01920 261 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 PMP2P02689 132 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 IL5P05113 134 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 GP1BAP07359 652 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 MRPL3P09001 348 aaKnown RBP6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 ALPPL2P10696 532 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 GNSP15586 552 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 CHATP28329 748 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 NTSP30990 170 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 RNF144AP50876 292 aaPredicted RBP6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 LIMK1P53667 647 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 FOXO1Q12778 655 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 TMEM115Q12893 351 aaPredicted RBP6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 ZNHIT3Q15649 155 aaPredicted RBP6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 SLC14A2Q15849 920 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 C9orf64Q5T6V5 341 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 FBXO42Q6P3S6 717 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 SLC22A25Q6T423 547 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 MBOAT1Q6ZNC8 495 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 LRRC69Q6ZNQ3 347 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 Q6ZSR6 202 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 NDUFAF7Q7L592 441 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 TIPARPQ7Z3E1 657 aaKnown RBP6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 CD163Q86VB7 1156 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 MRPL41Q8IXM3 137 aaKnown RBP6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 TEX26Q8N6G2 289 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 UBE2E3Q969T4 207 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 SLC41A3Q96GZ6 507 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 CDC6Q99741 560 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 RNF32Q9H0A6 362 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 IKZF2Q9UKS7 526 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 TRBV4-1A0A0J9YWV2 114 aa6.27□□□□□ -1.41
TGFBR3-209ENST00000532540 A0A1B0GVT2 93 aa6.27□□□□□ -1.41
TGFBR3-209ENST00000532540 SEC14L6B5MCN3 397 aa6.27□□□□□ -1.41
TGFBR3-209ENST00000532540 GABARAPH6UMI1 98 aa6.27□□□□□ -1.41
TGFBR3-209ENST00000532540 M0R143 59 aa6.27□□□□□ -1.41
TGFBR3-209ENST00000532540 MAGEB4O15481 346 aaPredicted RBP6.27□□□□□ -1.41
TGFBR3-209ENST00000532540 BCL2L11O43521 198 aa6.27□□□□□ -1.41
TGFBR3-209ENST00000532540 SCGNO76038 276 aa6.27□□□□□ -1.41
TGFBR3-209ENST00000532540 TUBG1P23258 451 aa6.27□□□□□ -1.41
TGFBR3-209ENST00000532540 RPL4P36578 427 aaKnown RBP6.27□□□□□ -1.41
TGFBR3-209ENST00000532540 RPL34P49207 117 aaKnown RBP6.27□□□□□ -1.41
TGFBR3-209ENST00000532540 OR12D2P58182 307 aa6.27□□□□□ -1.41
TGFBR3-209ENST00000532540 FXYD6P3P58550 94 aa6.27□□□□□ -1.41
TGFBR3-209ENST00000532540 CD81P60033 236 aa6.27□□□□□ -1.41
TGFBR3-209ENST00000532540 RAP1AP62834 184 aa6.27□□□□□ -1.41
TGFBR3-209ENST00000532540 KCNJ10P78508 379 aa6.27□□□□□ -1.41
TGFBR3-209ENST00000532540 ZP2Q05996 745 aa6.27□□□□□ -1.41
TGFBR3-209ENST00000532540 PJVKQ0ZLH3 352 aa6.27□□□□□ -1.41
TGFBR3-209ENST00000532540 ST3GAL3Q11203 375 aa6.27□□□□□ -1.41
TGFBR3-209ENST00000532540 SYT14P1Q58G82 188 aa6.27□□□□□ -1.41
TGFBR3-209ENST00000532540 IL34Q6ZMJ4 242 aa6.27□□□□□ -1.41
TGFBR3-209ENST00000532540 FAM26EQ8N5C1 309 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms