RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 MYL9P24844 172 aa11.13□□□□□ -0.63
CHD7-211ENST00000532149 MST1P26927 711 aa11.13□□□□□ -0.63
CHD7-211ENST00000532149 RPS19P39019 145 aaKnown RBP11.13□□□□□ -0.63
CHD7-211ENST00000532149 AQP2P41181 271 aa11.13□□□□□ -0.63
CHD7-211ENST00000532149 RPS3AP61247 264 aaKnown RBP11.13□□□□□ -0.63
CHD7-211ENST00000532149 RPS15P62841 145 aaKnown RBP11.13□□□□□ -0.63
CHD7-211ENST00000532149 RPL18Q07020 188 aaKnown RBP11.13□□□□□ -0.63
CHD7-211ENST00000532149 PCOLCEQ15113 449 aa11.13□□□□□ -0.63
CHD7-211ENST00000532149 TBC1D25Q3MII6 688 aa11.13□□□□□ -0.63
CHD7-211ENST00000532149 JMJD6Q6NYC1 403 aaPredicted RBP11.13□□□□□ -0.63
CHD7-211ENST00000532149 LEG1Q6P5S2 330 aa11.13□□□□□ -0.63
CHD7-211ENST00000532149 FAM198BQ6UWH4 519 aa11.13□□□□□ -0.63
CHD7-211ENST00000532149 C6orf15Q6UXA7 325 aaPredicted RBP11.13□□□□□ -0.63
CHD7-211ENST00000532149 FAM220AQ7Z4H9 259 aa11.13□□□□□ -0.63
CHD7-211ENST00000532149 CCDC190Q86UF4 302 aa11.13□□□□□ -0.63
CHD7-211ENST00000532149 IGFN1Q86VF2 1251 aa11.13□□□□□ -0.63
CHD7-211ENST00000532149 KLBQ86Z14 1044 aa11.13□□□□□ -0.63
CHD7-211ENST00000532149 NXPE2Q96DL1 559 aa11.13□□□□□ -0.63
CHD7-211ENST00000532149 CMTM3Q96MX0 182 aa11.13□□□□□ -0.63
CHD7-211ENST00000532149 ALG12Q9BV10 488 aa11.13□□□□□ -0.63
CHD7-211ENST00000532149 HDGFL3Q9Y3E1 203 aa11.13□□□□□ -0.63
CHD7-211ENST00000532149 PTRH2Q9Y3E5 179 aaKnown RBP11.13□□□□□ -0.63
CHD7-211ENST00000532149 B3GALT1Q9Y5Z6 326 aa11.13□□□□□ -0.63
CHD7-211ENST00000532149 NSG1A0A0A6YYJ2 146 aa11.12□□□□□ -0.63
CHD7-211ENST00000532149 LOC102725191A0A1B0GVB3 256 aa11.12□□□□□ -0.63
CHD7-211ENST00000532149 TMEM200CA6NKL6 621 aa11.12□□□□□ -0.63
CHD7-211ENST00000532149 ZNF879B4DU55 563 aa11.12□□□□□ -0.63
CHD7-211ENST00000532149 GABRPO00591 440 aa11.12□□□□□ -0.63
CHD7-211ENST00000532149 CASKO14936 926 aa11.12□□□□□ -0.63
CHD7-211ENST00000532149 OIP5O43482 229 aa11.12□□□□□ -0.63
CHD7-211ENST00000532149 KLF7O75840 302 aaPredicted RBP11.12□□□□□ -0.63
CHD7-211ENST00000532149 UPK1BO75841 260 aa11.12□□□□□ -0.63
CHD7-211ENST00000532149 CDRT1O95170 752 aa11.12□□□□□ -0.63
CHD7-211ENST00000532149 APOA1P02647 267 aa11.12□□□□□ -0.63
CHD7-211ENST00000532149 BMP4P12644 408 aa11.12□□□□□ -0.63
CHD7-211ENST00000532149 MAPK3P27361 379 aaPredicted RBP11.12□□□□□ -0.63
CHD7-211ENST00000532149 RPS5P46782 204 aaKnown RBP11.12□□□□□ -0.63
CHD7-211ENST00000532149 PSMD7P51665 324 aa11.12□□□□□ -0.63
CHD7-211ENST00000532149 ERVK-25P63136 954 aa11.12□□□□□ -0.63
CHD7-211ENST00000532149 SIRPAP78324 504 aa11.12□□□□□ -0.63
CHD7-211ENST00000532149 CHAF1BQ13112 559 aa11.12□□□□□ -0.63
CHD7-211ENST00000532149 ZNF239Q16600 458 aaKnown RBP11.12□□□□□ -0.63
CHD7-211ENST00000532149 BTBD16Q32M84 506 aa11.12□□□□□ -0.63
CHD7-211ENST00000532149 ZNF791Q3KP31 576 aaPredicted RBP11.12□□□□□ -0.63
CHD7-211ENST00000532149 LCE2AQ5TA79 106 aaPredicted RBP11.12□□□□□ -0.63
CHD7-211ENST00000532149 EEF1A1P5Q5VTE0 462 aa11.12□□□□□ -0.63
CHD7-211ENST00000532149 DMKNQ6E0U4 476 aaPredicted RBP11.12□□□□□ -0.63
CHD7-211ENST00000532149 C3orf33Q6P1S2 294 aa11.12□□□□□ -0.63
CHD7-211ENST00000532149 PAQR6Q6TCH4 344 aa11.12□□□□□ -0.63
CHD7-211ENST00000532149 H1FNTQ75WM6 255 aaPredicted RBP11.12□□□□□ -0.63
CHD7-211ENST00000532149 SHFQ7M4L6 423 aa11.12□□□□□ -0.63
CHD7-211ENST00000532149 PXKQ7Z7A4 578 aa11.12□□□□□ -0.63
CHD7-211ENST00000532149 ZBTB46Q86UZ6 589 aa11.12□□□□□ -0.63
CHD7-211ENST00000532149 ESX1Q8N693 406 aa11.12□□□□□ -0.63
CHD7-211ENST00000532149 LRRC17Q8N6Y2 441 aa11.12□□□□□ -0.63
CHD7-211ENST00000532149 GDPD1Q8N9F7 314 aa11.12□□□□□ -0.63
CHD7-211ENST00000532149 SDR9C7Q8NEX9 313 aa11.12□□□□□ -0.63
CHD7-211ENST00000532149 NEIL3Q8TAT5 605 aa11.12□□□□□ -0.63
CHD7-211ENST00000532149 SMIM19Q96E16 107 aa11.12□□□□□ -0.63
CHD7-211ENST00000532149 KTI12Q96EK9 354 aaPredicted RBP11.12□□□□□ -0.63
CHD7-211ENST00000532149 KLHL15Q96M94 604 aa11.12□□□□□ -0.63
CHD7-211ENST00000532149 RASL10BQ96S79 203 aa11.12□□□□□ -0.63
CHD7-211ENST00000532149 NMNAT3Q96T66 252 aa11.12□□□□□ -0.63
CHD7-211ENST00000532149 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.12□□□□□ -0.63
CHD7-211ENST00000532149 SMURF1Q9HCE7 757 aa11.12□□□□□ -0.63
CHD7-211ENST00000532149 APMAPQ9HDC9 416 aa11.12□□□□□ -0.63
CHD7-211ENST00000532149 VSX1Q9NZR4 365 aaPredicted RBP11.12□□□□□ -0.63
CHD7-211ENST00000532149 CMAHPQ9Y471 501 aa11.12□□□□□ -0.63
CHD7-211ENST00000532149 SDK1Q7Z5N4 2213 aa11.12□□□□□ -0.63
CHD7-211ENST00000532149 EXPH5Q8NEV8 1989 aa11.11□□□□□ -0.63
CHD7-211ENST00000532149 CCDC187A0A096LP49 1063 aa11.11□□□□□ -0.63
CHD7-211ENST00000532149 TEX13CA0A0J9YWL9 993 aa11.11□□□□□ -0.63
CHD7-211ENST00000532149 A0A1W2PQL4 384 aaPredicted RBP11.11□□□□□ -0.63
CHD7-211ENST00000532149 PRSS37A4D1T9 235 aa11.11□□□□□ -0.63
CHD7-211ENST00000532149 OR6C68A6NDL8 312 aa11.11□□□□□ -0.63
CHD7-211ENST00000532149 WWP2O00308 870 aa11.11□□□□□ -0.63
CHD7-211ENST00000532149 PLPP3O14495 311 aa11.11□□□□□ -0.63
CHD7-211ENST00000532149 GNB5O14775 395 aa11.11□□□□□ -0.63
CHD7-211ENST00000532149 DNPH1O43598 174 aa11.11□□□□□ -0.63
CHD7-211ENST00000532149 TMCC2O75069 709 aa11.11□□□□□ -0.63
CHD7-211ENST00000532149 PTTG1O95997 202 aa11.11□□□□□ -0.63
CHD7-211ENST00000532149 HPP00738 406 aa11.11□□□□□ -0.63
CHD7-211ENST00000532149 COX6A1P12074 109 aa11.11□□□□□ -0.63
CHD7-211ENST00000532149 CASP3P42574 277 aa11.11□□□□□ -0.63
CHD7-211ENST00000532149 SSR4P51571 173 aa11.11□□□□□ -0.63
CHD7-211ENST00000532149 FBXW4P57775 412 aa11.11□□□□□ -0.63
CHD7-211ENST00000532149 FABP5Q01469 135 aa11.11□□□□□ -0.63
CHD7-211ENST00000532149 ZNF85Q03923 595 aa11.11□□□□□ -0.63
CHD7-211ENST00000532149 SELENBP1Q13228 472 aa11.11□□□□□ -0.63
CHD7-211ENST00000532149 TOMM34Q15785 309 aaPredicted RBP11.11□□□□□ -0.63
CHD7-211ENST00000532149 TRIM16LQ309B1 348 aa11.11□□□□□ -0.63
CHD7-211ENST00000532149 YIF1BQ5BJH7 314 aa11.11□□□□□ -0.63
CHD7-211ENST00000532149 CDCP2Q5VXM1 449 aa11.11□□□□□ -0.63
CHD7-211ENST00000532149 C22orf42Q6IC83 251 aa11.11□□□□□ -0.63
CHD7-211ENST00000532149 KCTD18Q6PI47 426 aaPredicted RBP11.11□□□□□ -0.63
CHD7-211ENST00000532149 XKRXQ6PP77 449 aa11.11□□□□□ -0.63
CHD7-211ENST00000532149 LYPD8Q6UX82 237 aa11.11□□□□□ -0.63
CHD7-211ENST00000532149 SHISA6Q6ZSJ9 500 aa11.11□□□□□ -0.63
CHD7-211ENST00000532149 RAB11FIP2Q7L804 512 aa11.11□□□□□ -0.63
CHD7-211ENST00000532149 EXD3Q8N9H8 876 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms