RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 HPRP00739 348 aa12.82□□□□□ -0.36
CPSF1-206ENST00000531480 EDNRAP25101 427 aa12.82□□□□□ -0.36
CPSF1-206ENST00000531480 FASP25445 335 aa12.82□□□□□ -0.36
CPSF1-206ENST00000531480 GTF2E2P29084 291 aaKnown RBP12.82□□□□□ -0.36
CPSF1-206ENST00000531480 RRM2P31350 389 aa12.82□□□□□ -0.36
CPSF1-206ENST00000531480 UQCRC1P31930 480 aa12.82□□□□□ -0.36
CPSF1-206ENST00000531480 OMPP47874 163 aa12.82□□□□□ -0.36
CPSF1-206ENST00000531480 ARHGDIAP52565 204 aa12.82□□□□□ -0.36
CPSF1-206ENST00000531480 PUDPQ08623 228 aa12.82□□□□□ -0.36
CPSF1-206ENST00000531480 GK3PQ14409 553 aa12.82□□□□□ -0.36
CPSF1-206ENST00000531480 SEC23BQ15437 767 aa12.82□□□□□ -0.36
CPSF1-206ENST00000531480 ANKDD1AQ495B1 522 aa12.82□□□□□ -0.36
CPSF1-206ENST00000531480 TBPL2Q6SJ96 375 aa12.82□□□□□ -0.36
CPSF1-206ENST00000531480 ZNF730Q6ZMV8 503 aa12.82□□□□□ -0.36
CPSF1-206ENST00000531480 LRRC17Q8N6Y2 441 aa12.82□□□□□ -0.36
CPSF1-206ENST00000531480 ZNF610Q8N9Z0 462 aa12.82□□□□□ -0.36
CPSF1-206ENST00000531480 OR4C15Q8NGM1 316 aa12.82□□□□□ -0.36
CPSF1-206ENST00000531480 SLCO4A1Q96BD0 722 aa12.82□□□□□ -0.36
CPSF1-206ENST00000531480 ZNF385AQ96PM9 386 aaKnown RBP12.82□□□□□ -0.36
CPSF1-206ENST00000531480 BDH2Q9BUT1 245 aa12.82□□□□□ -0.36
CPSF1-206ENST00000531480 CHID1Q9BWS9 393 aa12.82□□□□□ -0.36
CPSF1-206ENST00000531480 OPN3Q9H1Y3 402 aaPredicted RBP12.82□□□□□ -0.36
CPSF1-206ENST00000531480 ARMC1Q9NVT9 282 aa12.82□□□□□ -0.36
CPSF1-206ENST00000531480 ELOVL5Q9NYP7 299 aa12.82□□□□□ -0.36
CPSF1-206ENST00000531480 HIF3AQ9Y2N7 669 aa12.82□□□□□ -0.36
CPSF1-206ENST00000531480 TESMINQ9Y4I5 508 aa12.82□□□□□ -0.36
CPSF1-206ENST00000531480 ANKHD1Q8IWZ3 2542 aaKnown RBP12.82□□□□□ -0.36
CPSF1-206ENST00000531480 ALPK2Q86TB3 2170 aa12.81□□□□□ -0.36
CPSF1-206ENST00000531480 CRYBG3Q68DQ2 2970 aa12.81□□□□□ -0.36
CPSF1-206ENST00000531480 EEF1E1-BLOC1S5C9J1V9 151 aa12.81□□□□□ -0.36
CPSF1-206ENST00000531480 EEF1E1O43324 174 aaKnown RBP12.81□□□□□ -0.36
CPSF1-206ENST00000531480 IFI30P13284 250 aa12.81□□□□□ -0.36
CPSF1-206ENST00000531480 FUT1P19526 365 aa12.81□□□□□ -0.36
CPSF1-206ENST00000531480 MAKP20794 623 aa12.81□□□□□ -0.36
CPSF1-206ENST00000531480 GRNP28799 593 aaKnown RBP12.81□□□□□ -0.36
CPSF1-206ENST00000531480 SLC9A3P48764 834 aa12.81□□□□□ -0.36
CPSF1-206ENST00000531480 SORDQ00796 357 aa12.81□□□□□ -0.36
CPSF1-206ENST00000531480 SPIBQ01892 262 aa12.81□□□□□ -0.36
CPSF1-206ENST00000531480 PMS2P3Q13401 168 aa12.81□□□□□ -0.36
CPSF1-206ENST00000531480 CCNIQ14094 377 aa12.81□□□□□ -0.36
CPSF1-206ENST00000531480 RCN1Q15293 331 aa12.81□□□□□ -0.36
CPSF1-206ENST00000531480 OR2T5Q6IEZ7 315 aa12.81□□□□□ -0.36
CPSF1-206ENST00000531480 GPAT4Q86UL3 456 aa12.81□□□□□ -0.36
CPSF1-206ENST00000531480 GABRG1Q8N1C3 465 aa12.81□□□□□ -0.36
CPSF1-206ENST00000531480 OR4K5Q8NGD3 323 aa12.81□□□□□ -0.36
CPSF1-206ENST00000531480 OR2T29Q8NH02 315 aa12.81□□□□□ -0.36
CPSF1-206ENST00000531480 PARPBPQ9NWS1 579 aa12.81□□□□□ -0.36
CPSF1-206ENST00000531480 GALNT8Q9NY28 637 aa12.81□□□□□ -0.36
CPSF1-206ENST00000531480 MALT1Q9UDY8 824 aa12.81□□□□□ -0.36
CPSF1-206ENST00000531480 AURKCQ9UQB9 309 aa12.81□□□□□ -0.36
CPSF1-206ENST00000531480 RCE1Q9Y256 329 aa12.81□□□□□ -0.36
CPSF1-206ENST00000531480 TMEM5Q9Y2B1 443 aa12.81□□□□□ -0.36
CPSF1-206ENST00000531480 NOSIPQ9Y314 301 aaKnown RBP12.81□□□□□ -0.36
CPSF1-206ENST00000531480 NOX1Q9Y5S8 564 aa12.81□□□□□ -0.36
CPSF1-206ENST00000531480 NPIPB13A6NJU9 1138 aa12.8□□□□□ -0.36
CPSF1-206ENST00000531480 NPIPB4C9JG80 1138 aa12.8□□□□□ -0.36
CPSF1-206ENST00000531480 PDLIM1O00151 329 aa12.8□□□□□ -0.36
CPSF1-206ENST00000531480 CDC42EP2O14613 210 aa12.8□□□□□ -0.36
CPSF1-206ENST00000531480 MRPL33O75394 65 aaKnown RBP12.8□□□□□ -0.36
CPSF1-206ENST00000531480 DEAF1O75398 565 aaPredicted RBP12.8□□□□□ -0.36
CPSF1-206ENST00000531480 SMNDC1O75940 238 aaKnown RBP eCLIP12.8□□□□□ -0.36
CPSF1-206ENST00000531480 HLA-DOBP13765 273 aa12.8□□□□□ -0.36
CPSF1-206ENST00000531480 ZNF43P17038 809 aa12.8□□□□□ -0.36
CPSF1-206ENST00000531480 CBLP22681 906 aa12.8□□□□□ -0.36
CPSF1-206ENST00000531480 PEX19P40855 299 aa12.8□□□□□ -0.36
CPSF1-206ENST00000531480 ZNF770Q6IQ21 691 aaPredicted RBP12.8□□□□□ -0.36
CPSF1-206ENST00000531480 Q6ZT83 130 aa12.8□□□□□ -0.36
CPSF1-206ENST00000531480 BEND4Q6ZU67 534 aa12.8□□□□□ -0.36
CPSF1-206ENST00000531480 LUZP2Q86TE4 346 aa12.8□□□□□ -0.36
CPSF1-206ENST00000531480 KDM8Q8N371 416 aa12.8□□□□□ -0.36
CPSF1-206ENST00000531480 C10orf53Q8N6V4 93 aa12.8□□□□□ -0.36
CPSF1-206ENST00000531480 OR52J3Q8NH60 311 aa12.8□□□□□ -0.36
CPSF1-206ENST00000531480 ZNF775Q96BV0 537 aaPredicted RBP12.8□□□□□ -0.36
CPSF1-206ENST00000531480 LRRC46Q96FV0 321 aa12.8□□□□□ -0.36
CPSF1-206ENST00000531480 ALPK1Q96QP1 1244 aa12.8□□□□□ -0.36
CPSF1-206ENST00000531480 SPOCK3Q9BQ16 436 aa12.8□□□□□ -0.36
CPSF1-206ENST00000531480 RBM24Q9BX46 236 aaKnown RBP12.8□□□□□ -0.36
CPSF1-206ENST00000531480 OSBPL10Q9BXB5 764 aa12.8□□□□□ -0.36
CPSF1-206ENST00000531480 C12orf49Q9H741 205 aa12.8□□□□□ -0.36
CPSF1-206ENST00000531480 VNN3Q9NY84 501 aa12.8□□□□□ -0.36
CPSF1-206ENST00000531480 DCHS2Q6V1P9 2916 aa12.79□□□□□ -0.36
CPSF1-206ENST00000531480 CELSR2Q9HCU4 2923 aa12.79□□□□□ -0.36
CPSF1-206ENST00000531480 PRSS44E7EML9 344 aa12.79□□□□□ -0.36
CPSF1-206ENST00000531480 GNGT2O14610 69 aa12.79□□□□□ -0.36
CPSF1-206ENST00000531480 ADORA3P0DMS8 318 aa12.79□□□□□ -0.36
CPSF1-206ENST00000531480 ANPEPP15144 967 aa12.79□□□□□ -0.36
CPSF1-206ENST00000531480 PSMB1P20618 241 aaKnown RBP12.79□□□□□ -0.36
CPSF1-206ENST00000531480 COX5AP20674 150 aa12.79□□□□□ -0.36
CPSF1-206ENST00000531480 CCKARP32238 428 aa12.79□□□□□ -0.36
CPSF1-206ENST00000531480 CD79BP40259 229 aa12.79□□□□□ -0.36
CPSF1-206ENST00000531480 RPL18Q07020 188 aaKnown RBP12.79□□□□□ -0.36
CPSF1-206ENST00000531480 FGD3Q5JSP0 725 aa12.79□□□□□ -0.36
CPSF1-206ENST00000531480 FBXW9Q5XUX1 488 aa12.79□□□□□ -0.36
CPSF1-206ENST00000531480 ZNF787Q6DD87 383 aa12.79□□□□□ -0.36
CPSF1-206ENST00000531480 C1orf94Q6P1W5 598 aa12.79□□□□□ -0.36
CPSF1-206ENST00000531480 NANOGNBQ7Z5D8 188 aa12.79□□□□□ -0.36
CPSF1-206ENST00000531480 ZER1Q7Z7L7 766 aa12.79□□□□□ -0.36
CPSF1-206ENST00000531480 STK32CQ86UX6 486 aa12.79□□□□□ -0.36
CPSF1-206ENST00000531480 DMRTC2Q8IXT2 367 aaPredicted RBP12.79□□□□□ -0.36
CPSF1-206ENST00000531480 TMEM123Q8N131 208 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms