RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 NKPD1Q17RQ9 610 aa7.94□□□□□ -1.14
NEDD8-206ENST00000531430 SAXO2Q658L1 398 aa7.94□□□□□ -1.14
NEDD8-206ENST00000531430 REP15Q6BDI9 236 aa7.94□□□□□ -1.14
NEDD8-206ENST00000531430 WBP2NLQ6ICG8 309 aa7.94□□□□□ -1.14
NEDD8-206ENST00000531430 SHISA2Q6UWI4 295 aa7.94□□□□□ -1.14
NEDD8-206ENST00000531430 LRRC74BQ6ZQY2 392 aa7.94□□□□□ -1.14
NEDD8-206ENST00000531430 TREML1Q86YW5 311 aa7.94□□□□□ -1.14
NEDD8-206ENST00000531430 CMIPQ8IY22 773 aa7.94□□□□□ -1.14
NEDD8-206ENST00000531430 ZNF440Q8IYI8 595 aa7.94□□□□□ -1.14
NEDD8-206ENST00000531430 CNPY4Q8N129 248 aa7.94□□□□□ -1.14
NEDD8-206ENST00000531430 MIER2Q8N344 545 aa7.94□□□□□ -1.14
NEDD8-206ENST00000531430 RIBC1Q8N443 379 aaPredicted RBP7.94□□□□□ -1.14
NEDD8-206ENST00000531430 TEX29Q8N6K0 151 aa7.94□□□□□ -1.14
NEDD8-206ENST00000531430 FAM169BQ8N8A8 192 aa7.94□□□□□ -1.14
NEDD8-206ENST00000531430 OR52P1PQ8NH57 321 aa7.94□□□□□ -1.14
NEDD8-206ENST00000531430 NANPQ8TBE9 248 aa7.94□□□□□ -1.14
NEDD8-206ENST00000531430 OIT3Q8WWZ8 545 aa7.94□□□□□ -1.14
NEDD8-206ENST00000531430 NEURL3Q96EH8 262 aa7.94□□□□□ -1.14
NEDD8-206ENST00000531430 BOD1Q96IK1 185 aa7.94□□□□□ -1.14
NEDD8-206ENST00000531430 ZNF317Q96PQ6 595 aaPredicted RBP7.94□□□□□ -1.14
NEDD8-206ENST00000531430 DUX5Q96PT3 197 aa7.94□□□□□ -1.14
NEDD8-206ENST00000531430 TRNT1Q96Q11 434 aaKnown RBP7.94□□□□□ -1.14
NEDD8-206ENST00000531430 C1QTNF5Q9BXJ0 243 aa7.94□□□□□ -1.14
NEDD8-206ENST00000531430 LINC00470Q9BZP3 86 aa7.94□□□□□ -1.14
NEDD8-206ENST00000531430 SLC38A1Q9H2H9 487 aa7.94□□□□□ -1.14
NEDD8-206ENST00000531430 OR51B6Q9H340 312 aa7.94□□□□□ -1.14
NEDD8-206ENST00000531430 NELFAQ9H3P2 528 aa7.94□□□□□ -1.14
NEDD8-206ENST00000531430 PIF1Q9H611 641 aa7.94□□□□□ -1.14
NEDD8-206ENST00000531430 C7orf69Q9H7B7 122 aa7.94□□□□□ -1.14
NEDD8-206ENST00000531430 AKTIPQ9H8T0 292 aa7.94□□□□□ -1.14
NEDD8-206ENST00000531430 CACYBPQ9HB71 228 aaKnown RBP7.94□□□□□ -1.14
NEDD8-206ENST00000531430 SLC17A7Q9P2U7 560 aa7.94□□□□□ -1.14
NEDD8-206ENST00000531430 ZNF232Q9UNY5 417 aa7.94□□□□□ -1.14
NEDD8-206ENST00000531430 POFUT2Q9Y2G5 429 aa7.94□□□□□ -1.14
NEDD8-206ENST00000531430 WNK2Q9Y3S1 2297 aa7.94□□□□□ -1.14
NEDD8-206ENST00000531430 WDR91A4D1P6 747 aa7.93□□□□□ -1.14
NEDD8-206ENST00000531430 CCDC154A6NI56 674 aa7.93□□□□□ -1.14
NEDD8-206ENST00000531430 GUSBP08236 651 aa7.93□□□□□ -1.14
NEDD8-206ENST00000531430 PNMTP11086 282 aa7.93□□□□□ -1.14
NEDD8-206ENST00000531430 PRG2P13727 222 aa7.93□□□□□ -1.14
NEDD8-206ENST00000531430 GLRXP35754 106 aa7.93□□□□□ -1.14
NEDD8-206ENST00000531430 MAGEB1P43366 347 aa7.93□□□□□ -1.14
NEDD8-206ENST00000531430 EVX1P49640 407 aa7.93□□□□□ -1.14
NEDD8-206ENST00000531430 P2RY4P51582 365 aa7.93□□□□□ -1.14
NEDD8-206ENST00000531430 SELENOVP59797 346 aa7.93□□□□□ -1.14
NEDD8-206ENST00000531430 LMO4P61968 165 aa7.93□□□□□ -1.14
NEDD8-206ENST00000531430 RAB1AP62820 205 aa7.93□□□□□ -1.14
NEDD8-206ENST00000531430 HOXC5Q00444 222 aa7.93□□□□□ -1.14
NEDD8-206ENST00000531430 FOXL1Q12952 345 aa7.93□□□□□ -1.14
NEDD8-206ENST00000531430 CHI3L2Q15782 390 aa7.93□□□□□ -1.14
NEDD8-206ENST00000531430 MSMPQ1L6U9 139 aa7.93□□□□□ -1.14
NEDD8-206ENST00000531430 GSG1Q2KHT4 349 aa7.93□□□□□ -1.14
NEDD8-206ENST00000531430 MIDNQ504T8 468 aa7.93□□□□□ -1.14
NEDD8-206ENST00000531430 SPANXN4Q5MJ08 99 aa7.93□□□□□ -1.14
NEDD8-206ENST00000531430 DCAF12L2Q5VW00 463 aa7.93□□□□□ -1.14
NEDD8-206ENST00000531430 TMEM154Q6P9G4 183 aa7.93□□□□□ -1.14
NEDD8-206ENST00000531430 ZNF813Q6ZN06 617 aa7.93□□□□□ -1.14
NEDD8-206ENST00000531430 C1orf229Q6ZS94 237 aaPredicted RBP7.93□□□□□ -1.14
NEDD8-206ENST00000531430 USP43Q70EL4 1123 aa7.93□□□□□ -1.14
NEDD8-206ENST00000531430 CCDC36Q8IYA8 594 aa7.93□□□□□ -1.14
NEDD8-206ENST00000531430 ICA1LQ8NDH6 482 aa7.93□□□□□ -1.14
NEDD8-206ENST00000531430 PIK3C3Q8NEB9 887 aa7.93□□□□□ -1.14
NEDD8-206ENST00000531430 OR8J2Q8NGG1 315 aa7.93□□□□□ -1.14
NEDD8-206ENST00000531430 OXGR1Q96P68 337 aa7.93□□□□□ -1.14
NEDD8-206ENST00000531430 PANX1Q96RD7 426 aa7.93□□□□□ -1.14
NEDD8-206ENST00000531430 EMC6Q9BV81 110 aa7.93□□□□□ -1.14
NEDD8-206ENST00000531430 ZNF747Q9BV97 191 aa7.93□□□□□ -1.14
NEDD8-206ENST00000531430 ZNF416Q9BWM5 594 aa7.93□□□□□ -1.14
NEDD8-206ENST00000531430 ZNF665Q9H7R5 613 aa7.93□□□□□ -1.14
NEDD8-206ENST00000531430 TAAR3PQ9P1P4 343 aa7.93□□□□□ -1.14
NEDD8-206ENST00000531430 MYEF2Q9P2K5 600 aaKnown RBP7.93□□□□□ -1.14
NEDD8-206ENST00000531430 RPS6KB2Q9UBS0 482 aa7.93□□□□□ -1.14
NEDD8-206ENST00000531430 SEC14L4Q9UDX3 406 aa7.93□□□□□ -1.14
NEDD8-206ENST00000531430 A0A0G2JMP0 313 aa7.92□□□□□ -1.14
NEDD8-206ENST00000531430 A0A0X1KG70 313 aa7.92□□□□□ -1.14
NEDD8-206ENST00000531430 ZNF726A6NNF4 738 aa7.92□□□□□ -1.14
NEDD8-206ENST00000531430 RPL36A-HNRNPH2H7BZ11 118 aa7.92□□□□□ -1.14
NEDD8-206ENST00000531430 FRS3O43559 492 aa7.92□□□□□ -1.14
NEDD8-206ENST00000531430 AKAP8O43823 692 aaKnown RBP7.92□□□□□ -1.14
NEDD8-206ENST00000531430 SERPINI2O75830 405 aa7.92□□□□□ -1.14
NEDD8-206ENST00000531430 RAB36O95755 333 aa7.92□□□□□ -1.14
NEDD8-206ENST00000531430 PATE4P0C8F1 98 aa7.92□□□□□ -1.14
NEDD8-206ENST00000531430 FAM157BP0CG42 384 aa7.92□□□□□ -1.14
NEDD8-206ENST00000531430 NQO1P15559 274 aaKnown RBP7.92□□□□□ -1.14
NEDD8-206ENST00000531430 ACAA2P42765 397 aaKnown RBP7.92□□□□□ -1.14
NEDD8-206ENST00000531430 GIPRP48546 466 aa7.92□□□□□ -1.14
NEDD8-206ENST00000531430 CCL8P80075 99 aa7.92□□□□□ -1.14
NEDD8-206ENST00000531430 CASP8Q14790 479 aa7.92□□□□□ -1.14
NEDD8-206ENST00000531430 RAB39AQ14964 217 aa7.92□□□□□ -1.14
NEDD8-206ENST00000531430 COX20Q5RI15 118 aa7.92□□□□□ -1.14
NEDD8-206ENST00000531430 PHYHD1Q5SRE7 291 aa7.92□□□□□ -1.14
NEDD8-206ENST00000531430 AP1ARQ63HQ0 302 aa7.92□□□□□ -1.14
NEDD8-206ENST00000531430 TREML4Q6UXN2 200 aa7.92□□□□□ -1.14
NEDD8-206ENST00000531430 ZNF836Q6ZNA1 936 aa7.92□□□□□ -1.14
NEDD8-206ENST00000531430 LRRC34Q8IZ02 419 aa7.92□□□□□ -1.14
NEDD8-206ENST00000531430 CLIP4Q8N3C7 705 aa7.92□□□□□ -1.14
NEDD8-206ENST00000531430 TRIML2Q8N7C3 387 aa7.92□□□□□ -1.14
NEDD8-206ENST00000531430 ZDHHC22Q8N966 263 aa7.92□□□□□ -1.14
NEDD8-206ENST00000531430 OR4M2Q8NGB6 313 aa7.92□□□□□ -1.14
NEDD8-206ENST00000531430 OR6N1Q8NGY5 312 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms