RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 PALMDQ9NP74 551 aa-1.93□□□□□ -2.72
RNU6-542P-201ENST00000516405 C8orf17Q9NRJ1 99 aa-1.93□□□□□ -2.72
RNU6-542P-201ENST00000516405 MRPL17Q9NRX2 175 aaKnown RBP-1.93□□□□□ -2.72
RNU6-542P-201ENST00000516405 TREX1Q9NSU2 369 aa-1.93□□□□□ -2.72
RNU6-542P-201ENST00000516405 PDRG1Q9NUG6 133 aa-1.93□□□□□ -2.72
RNU6-542P-201ENST00000516405 MRPL16Q9NX20 251 aaKnown RBP-1.93□□□□□ -2.72
RNU6-542P-201ENST00000516405 VAX2Q9UIW0 290 aa-1.93□□□□□ -2.72
RNU6-542P-201ENST00000516405 EXOSC1Q9Y3B2 195 aaKnown RBP-1.93□□□□□ -2.72
RNU6-542P-201ENST00000516405 CSDC2Q9Y534 153 aaKnown RBP-1.93□□□□□ -2.72
RNU6-542P-201ENST00000516405 ZDBF2Q9HCK1 2354 aa-1.93□□□□□ -2.72
RNU6-542P-201ENST00000516405 DENND4BO75064 1496 aaPredicted RBP-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 CHD6Q8TD26 2715 aa-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 A0A1W2PQ09 198 aa-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 GLCEO94923 617 aa-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 CELF2O95319 508 aaKnown RBP-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 SMIM10L1P0DMW3 83 aa-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 THRAP10827 490 aa-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 HPGDP15428 266 aa-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 ZNF7P17097 686 aaPredicted RBP-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 EEF1B2P24534 225 aaKnown RBP-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 PSMB4P28070 264 aa-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 BLVRBP30043 206 aaPredicted RBP-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 TM4SF1P30408 202 aa-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 MRPL12P52815 198 aaKnown RBP-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 PLK1P53350 603 aa-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 SLC3A1Q07837 685 aa-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 ATP6AP1Q15904 470 aa-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 SMU1Q2TAY7 513 aa-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 SLC25A52Q3SY17 297 aa-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 MPPE1Q53F39 396 aa-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 RAB41Q5JT25 222 aa-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 COA6Q5JTJ3 125 aaKnown RBP-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 LDLRAD2Q5SZI1 272 aa-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 SPOUT1Q5T280 376 aaKnown RBP-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 LIN9Q5TKA1 542 aa-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 PM20D1Q6GTS8 502 aa-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 DNAJC24Q6P3W2 148 aa-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 C10orf99Q6UWK7 81 aa-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 CES3Q6UWW8 571 aa-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 TMEM184AQ6ZMB5 413 aa-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 SCXQ7RTU7 201 aa-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 CPLX4Q7Z7G2 160 aa-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 MSRB3Q8IXL7 192 aa-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 ZNF283Q8N7M2 679 aa-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 C15orf53Q8NAA6 179 aa-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 NAXEQ8NCW5 288 aa-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 LFNGQ8NES3 379 aa-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 TSPAN14Q8NG11 270 aa-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 TTLQ8NG68 377 aa-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 OR4L1Q8NH43 312 aa-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 SPACA4Q8TDM5 124 aa-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 TEKT4Q8WW24 435 aa-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 RRP36Q96EU6 259 aaKnown RBP-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 SMIM10Q96HG1 83 aa-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 C20orf144Q9BQM9 153 aa-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 NTMT1Q9BV86 223 aa-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 SELENOIQ9C0D9 397 aa-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 NAT10Q9H0A0 1025 aaKnown RBP-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 PPDPFQ9H3Y8 114 aa-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 LRRC19Q9H756 370 aa-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 METTL7AQ9H8H3 244 aa-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 POPDC2Q9HBU9 364 aa-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 EXOSC4Q9NPD3 245 aaKnown RBP-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 DCAF13Q9NV06 445 aaKnown RBP-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 IL37Q9NZH6 218 aa-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 NFKBIL1Q9UBC1 381 aaPredicted RBP-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 PSORS1C1Q9UIG5 152 aa-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 ZNF490Q9ULM2 529 aaPredicted RBP-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 DIMT1Q9UNQ2 313 aaKnown RBP-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 ASB3Q9Y575 518 aa-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 IKBKGQ9Y6K9 419 aa-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 RTEL1-TNFRSF6BF6WH68 1400 aa-1.94□□□□□ -2.72
RNU6-542P-201ENST00000516405 TRAV6A0A075B6T7 132 aa-1.95□□□□□ -2.72
RNU6-542P-201ENST00000516405 LOC100509620A0A075B734 347 aa-1.95□□□□□ -2.72
RNU6-542P-201ENST00000516405 IGHV1OR15-9A0A0B4J2B8 117 aa-1.95□□□□□ -2.72
RNU6-542P-201ENST00000516405 hCG_1642624A0A1W2PR95 340 aa-1.95□□□□□ -2.72
RNU6-542P-201ENST00000516405 GOLGA6L4A6NEF3 574 aa-1.95□□□□□ -2.72
RNU6-542P-201ENST00000516405 DNALI1O14645 258 aaPredicted RBP-1.95□□□□□ -2.72
RNU6-542P-201ENST00000516405 CHUKO15111 745 aa-1.95□□□□□ -2.72
RNU6-542P-201ENST00000516405 TM9SF1O15321 606 aa-1.95□□□□□ -2.72
RNU6-542P-201ENST00000516405 TM7SF2O76062 418 aa-1.95□□□□□ -2.72
RNU6-542P-201ENST00000516405 REC8O95072 547 aa-1.95□□□□□ -2.72
RNU6-542P-201ENST00000516405 GSTA2P09210 222 aa-1.95□□□□□ -2.72
RNU6-542P-201ENST00000516405 OR8U9P0C7N5 309 aa-1.95□□□□□ -2.72
RNU6-542P-201ENST00000516405 TPBGLP0DKB5 382 aa-1.95□□□□□ -2.72
RNU6-542P-201ENST00000516405 SPP1P10451 314 aa-1.95□□□□□ -2.72
RNU6-542P-201ENST00000516405 LAMP2P13473 410 aa-1.95□□□□□ -2.72
RNU6-542P-201ENST00000516405 CPT2P23786 658 aa-1.95□□□□□ -2.72
RNU6-542P-201ENST00000516405 PSMA4P25789 261 aaKnown RBP-1.95□□□□□ -2.72
RNU6-542P-201ENST00000516405 GRK6P43250 576 aa-1.95□□□□□ -2.72
RNU6-542P-201ENST00000516405 TAS2R31P59538 309 aa-1.95□□□□□ -2.72
RNU6-542P-201ENST00000516405 PSG4Q00888 419 aa-1.95□□□□□ -2.72
RNU6-542P-201ENST00000516405 CHRNB3Q05901 458 aa-1.95□□□□□ -2.72
RNU6-542P-201ENST00000516405 FZD2Q14332 565 aa-1.95□□□□□ -2.72
RNU6-542P-201ENST00000516405 SURF2Q15527 256 aaPredicted RBP-1.95□□□□□ -2.72
RNU6-542P-201ENST00000516405 ZKSCAN8Q15776 578 aaPredicted RBP-1.95□□□□□ -2.72
RNU6-542P-201ENST00000516405 CLPPQ16740 277 aaPredicted RBP-1.95□□□□□ -2.72
RNU6-542P-201ENST00000516405 EXOC3L2Q2M3D2 409 aa-1.95□□□□□ -2.72
RNU6-542P-201ENST00000516405 TMEM176BQ3YBM2 270 aaPredicted RBP-1.95□□□□□ -2.72
RNU6-542P-201ENST00000516405 KLHL12Q53G59 568 aa-1.95□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms