RNA–Protein interactions for RNA: ENST00000511667.5

CLDND1-224, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-224ENST00000511667 GPAT4Q86UL3 456 aa11.78□□□□□ -0.52
CLDND1-224ENST00000511667 FAM169BQ8N8A8 192 aa11.78□□□□□ -0.52
CLDND1-224ENST00000511667 OR1K1Q8NGR3 316 aa11.78□□□□□ -0.52
CLDND1-224ENST00000511667 OR52N5Q8NH56 324 aa11.78□□□□□ -0.52
CLDND1-224ENST00000511667 OR10A6Q8NH74 314 aa11.78□□□□□ -0.52
CLDND1-224ENST00000511667 ZNF417Q8TAU3 575 aa11.78□□□□□ -0.52
CLDND1-224ENST00000511667 LRRC58Q96CX6 371 aa11.78□□□□□ -0.52
CLDND1-224ENST00000511667 PERPQ96FX8 193 aa11.78□□□□□ -0.52
CLDND1-224ENST00000511667 ZNF583Q96ND8 569 aa11.78□□□□□ -0.52
CLDND1-224ENST00000511667 ZNF587Q96SQ5 575 aaPredicted RBP11.78□□□□□ -0.52
CLDND1-224ENST00000511667 LAMP3Q9UQV4 416 aa11.78□□□□□ -0.52
CLDND1-224ENST00000511667 CORINQ9Y5Q5 1042 aa11.78□□□□□ -0.52
CLDND1-224ENST00000511667 ARFGEF3Q5TH69 2177 aa11.78□□□□□ -0.52
CLDND1-224ENST00000511667 CIB4A0PJX0 185 aa11.77□□□□□ -0.53
CLDND1-224ENST00000511667 CCT8L1PA6NM43 557 aa11.77□□□□□ -0.53
CLDND1-224ENST00000511667 BBIP1A8MTZ0 92 aa11.77□□□□□ -0.53
CLDND1-224ENST00000511667 CLOCKO15516 846 aa11.77□□□□□ -0.53
CLDND1-224ENST00000511667 CHP2O43745 196 aa11.77□□□□□ -0.53
CLDND1-224ENST00000511667 UPK3AO75631 287 aa11.77□□□□□ -0.53
CLDND1-224ENST00000511667 IGLV1-44P01699 117 aa11.77□□□□□ -0.53
CLDND1-224ENST00000511667 TROVE2P10155 538 aaKnown RBP eCLIP11.77□□□□□ -0.53
CLDND1-224ENST00000511667 HOXB1P14653 301 aaPredicted RBP11.77□□□□□ -0.53
CLDND1-224ENST00000511667 PAX7P23759 505 aa11.77□□□□□ -0.53
CLDND1-224ENST00000511667 ARFIP2P53365 341 aa11.77□□□□□ -0.53
CLDND1-224ENST00000511667 GUCY1A3Q02108 690 aa11.77□□□□□ -0.53
CLDND1-224ENST00000511667 SPOCK1Q08629 439 aa11.77□□□□□ -0.53
CLDND1-224ENST00000511667 CYLC2Q14093 348 aaPredicted RBP11.77□□□□□ -0.53
CLDND1-224ENST00000511667 ETFDHQ16134 617 aa11.77□□□□□ -0.53
CLDND1-224ENST00000511667 CYP51A1Q16850 503 aa11.77□□□□□ -0.53
CLDND1-224ENST00000511667 RABL3Q5HYI8 236 aa11.77□□□□□ -0.53
CLDND1-224ENST00000511667 B3GLCTQ6Y288 498 aa11.77□□□□□ -0.53
CLDND1-224ENST00000511667 RBM45Q8IUH3 476 aaKnown RBP11.77□□□□□ -0.53
CLDND1-224ENST00000511667 WDFY1Q8IWB7 410 aa11.77□□□□□ -0.53
CLDND1-224ENST00000511667 KDM8Q8N371 416 aa11.77□□□□□ -0.53
CLDND1-224ENST00000511667 SMYD1Q8NB12 490 aa11.77□□□□□ -0.53
CLDND1-224ENST00000511667 C10orf82Q8WW14 230 aa11.77□□□□□ -0.53
CLDND1-224ENST00000511667 MOGAT1Q96PD6 335 aa11.77□□□□□ -0.53
CLDND1-224ENST00000511667 TMEM27Q9HBJ8 222 aa11.77□□□□□ -0.53
CLDND1-224ENST00000511667 MED4Q9NPJ6 270 aa11.77□□□□□ -0.53
CLDND1-224ENST00000511667 MRPL39Q9NYK5 338 aaKnown RBP11.77□□□□□ -0.53
CLDND1-224ENST00000511667 CISD1Q9NZ45 108 aaKnown RBP11.77□□□□□ -0.53
CLDND1-224ENST00000511667 UPB1Q9UBR1 384 aa11.77□□□□□ -0.53
CLDND1-224ENST00000511667 RPS6KB2Q9UBS0 482 aa11.77□□□□□ -0.53
CLDND1-224ENST00000511667 M0R3H8 397 aa11.76□□□□□ -0.53
CLDND1-224ENST00000511667 PHF1O43189 567 aaPredicted RBP11.76□□□□□ -0.53
CLDND1-224ENST00000511667 IGF2P01344 180 aa11.76□□□□□ -0.53
CLDND1-224ENST00000511667 SH3BGRP55822 239 aaPredicted RBP11.76□□□□□ -0.53
CLDND1-224ENST00000511667 TBRG1Q3YBR2 411 aa11.76□□□□□ -0.53
CLDND1-224ENST00000511667 INTS11Q5TA45 600 aaKnown RBP11.76□□□□□ -0.53
CLDND1-224ENST00000511667 REP15Q6BDI9 236 aa11.76□□□□□ -0.53
CLDND1-224ENST00000511667 ALKBH2Q6NS38 261 aa11.76□□□□□ -0.53
CLDND1-224ENST00000511667 C8orf82Q6P1X6 216 aaPredicted RBP11.76□□□□□ -0.53
CLDND1-224ENST00000511667 KLHL17Q6TDP4 642 aa11.76□□□□□ -0.53
CLDND1-224ENST00000511667 ABHD12BQ7Z5M8 362 aaPredicted RBP11.76□□□□□ -0.53
CLDND1-224ENST00000511667 RANBP3LQ86VV4 465 aaPredicted RBP11.76□□□□□ -0.53
CLDND1-224ENST00000511667 SLC25A36Q96CQ1 311 aa11.76□□□□□ -0.53
CLDND1-224ENST00000511667 LRR1Q96L50 414 aa11.76□□□□□ -0.53
CLDND1-224ENST00000511667 OR2M2Q96R28 347 aa11.76□□□□□ -0.53
CLDND1-224ENST00000511667 EPYCQ99645 322 aa11.76□□□□□ -0.53
CLDND1-224ENST00000511667 MCHR1Q99705 422 aa11.76□□□□□ -0.53
CLDND1-224ENST00000511667 SH3GL1Q99961 368 aa11.76□□□□□ -0.53
CLDND1-224ENST00000511667 DHRS9Q9BPW9 319 aa11.76□□□□□ -0.53
CLDND1-224ENST00000511667 PRSS27Q9BQR3 290 aa11.76□□□□□ -0.53
CLDND1-224ENST00000511667 SLC19A3Q9BZV2 496 aa11.76□□□□□ -0.53
CLDND1-224ENST00000511667 A0A1W2PR80 420 aa11.75□□□□□ -0.53
CLDND1-224ENST00000511667 ZNF587BE7ETH6 402 aa11.75□□□□□ -0.53
CLDND1-224ENST00000511667 PLPP3O14495 311 aa11.75□□□□□ -0.53
CLDND1-224ENST00000511667 MT-ATP6P00846 226 aa11.75□□□□□ -0.53
CLDND1-224ENST00000511667 IGKV3-15P01624 115 aa11.75□□□□□ -0.53
CLDND1-224ENST00000511667 IGHV4-39P01824 125 aa11.75□□□□□ -0.53
CLDND1-224ENST00000511667 OPN1SWP03999 348 aa11.75□□□□□ -0.53
CLDND1-224ENST00000511667 TSPAN19P0C672 248 aa11.75□□□□□ -0.53
CLDND1-224ENST00000511667 HLA-DOBP13765 273 aa11.75□□□□□ -0.53
CLDND1-224ENST00000511667 ZNF43P17038 809 aa11.75□□□□□ -0.53
CLDND1-224ENST00000511667 TTKP33981 857 aa11.75□□□□□ -0.53
CLDND1-224ENST00000511667 MDH1P40925 334 aaKnown RBP11.75□□□□□ -0.53
CLDND1-224ENST00000511667 ZNF83P51522 516 aa11.75□□□□□ -0.53
CLDND1-224ENST00000511667 CDH11P55287 796 aa11.75□□□□□ -0.53
CLDND1-224ENST00000511667 PRPS1P60891 318 aa11.75□□□□□ -0.53
CLDND1-224ENST00000511667 RUNX1T1Q06455 604 aa11.75□□□□□ -0.53
CLDND1-224ENST00000511667 KRTAP1-1Q07627 177 aa11.75□□□□□ -0.53
CLDND1-224ENST00000511667 ZP4Q12836 540 aa11.75□□□□□ -0.53
CLDND1-224ENST00000511667 HIKESHIQ53FT3 197 aa11.75□□□□□ -0.53
CLDND1-224ENST00000511667 ENTPD8Q5MY95 495 aa11.75□□□□□ -0.53
CLDND1-224ENST00000511667 C9orf135Q5VTT2 229 aa11.75□□□□□ -0.53
CLDND1-224ENST00000511667 ZNF544Q6NX49 715 aa11.75□□□□□ -0.53
CLDND1-224ENST00000511667 NIPAL3Q6P499 406 aa11.75□□□□□ -0.53
CLDND1-224ENST00000511667 ANKRD16Q6P6B7 361 aa11.75□□□□□ -0.53
CLDND1-224ENST00000511667 PXKQ7Z7A4 578 aa11.75□□□□□ -0.53
CLDND1-224ENST00000511667 C20orf196Q8IYI0 205 aa11.75□□□□□ -0.53
CLDND1-224ENST00000511667 ADAMTS16Q8TE57 1224 aa11.75□□□□□ -0.53
CLDND1-224ENST00000511667 RASSF5Q8WWW0 418 aa11.75□□□□□ -0.53
CLDND1-224ENST00000511667 ZNF837Q96EG3 531 aaPredicted RBP11.75□□□□□ -0.53
CLDND1-224ENST00000511667 ALKBH3Q96Q83 286 aaPredicted RBP11.75□□□□□ -0.53
CLDND1-224ENST00000511667 ABCA1O95477 2261 aa11.75□□□□□ -0.53
CLDND1-224ENST00000511667 IGHV1-18A0A0C4DH31 117 aa11.74□□□□□ -0.53
CLDND1-224ENST00000511667 TRAPPC13A5PLN9 417 aa11.74□□□□□ -0.53
CLDND1-224ENST00000511667 LRRN3E7EW58 273 aa11.74□□□□□ -0.53
CLDND1-224ENST00000511667 MRASO14807 208 aa11.74□□□□□ -0.53
CLDND1-224ENST00000511667 ATP8B1O43520 1251 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms