RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 TWIST2Q8WVJ9 160 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 S100PBPQ96BU1 408 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 ROPN1LQ96C74 230 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 RASD2Q96D21 266 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 NEIL1Q96FI4 390 aaPredicted RBP2.52□□□□□ -2.01
CLOCK-209ENST00000511124 CITED4Q96RK1 184 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 C1orf21Q9H246 121 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 GHITMQ9H3K2 345 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 KLHL31Q9H511 634 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 C7orf69Q9H7B7 122 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 TMEM185BQ9H7F4 350 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 NIPAL2Q9H841 368 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 LIN28AQ9H9Z2 209 aaKnown RBP2.52□□□□□ -2.01
CLOCK-209ENST00000511124 BCO1Q9HAY6 547 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 PLAC1Q9HBJ0 212 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 INIPQ9NRY2 104 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 SIRT3Q9NTG7 399 aaPredicted RBP2.52□□□□□ -2.01
CLOCK-209ENST00000511124 SLAMF8Q9P0V8 285 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 PCTPQ9UKL6 214 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 SLC7A11Q9UPY5 501 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 ZNF337Q9Y3M9 751 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 CHCHD2Q9Y6H1 151 aaPredicted RBP2.52□□□□□ -2.01
CLOCK-209ENST00000511124 PLXNB3Q9ULL4 1909 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 ANKRD11Q6UB99 2663 aaPredicted RBP2.52□□□□□ -2.01
CLOCK-209ENST00000511124 CENPFP49454 3210 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 NAV2Q8IVL1 2488 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 SDK2Q58EX2 2172 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 CLDN24A6NM45 220 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 A8MT66 165 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 BBIP1A8MTZ0 92 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 FAAHO00519 579 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 GMFGO60234 142 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 SERPINI2O75830 405 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 TSPAN9O75954 239 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 MSMBP08118 114 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 CELA2AP08217 269 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 TFPTP0C1Z6 253 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 OR4A8P0C604 315 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 NID1P14543 1247 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 PCGF2P35227 344 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 MDH2P40926 338 aaKnown RBP2.52□□□□□ -2.01
CLOCK-209ENST00000511124 NR4A2P43354 598 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 ZNF81P51508 661 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 OR12D2P58182 307 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 IL5RAQ01344 420 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 ROR2Q01974 943 aaKnown RBP2.52□□□□□ -2.01
CLOCK-209ENST00000511124 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.52□□□□□ -2.01
CLOCK-209ENST00000511124 DLG1Q12959 904 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 GK3PQ14409 553 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 EFNB3Q15768 340 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 PRICKLE4Q2TBC4 344 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 CTU2Q2VPK5 515 aaKnown RBP2.52□□□□□ -2.01
CLOCK-209ENST00000511124 TBRG1Q3YBR2 411 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 XKR7Q5GH72 579 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 CCDC144NLQ6NUI1 221 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 RNF165Q6ZSG1 346 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 DHDDSQ86SQ9 333 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 GALNT10Q86SR1 603 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 SYT9Q86SS6 491 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 ISCA2Q86U28 154 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 C9orf40Q8IXQ3 194 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 CLDN22Q8N7P3 220 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 ANKS4BQ8N8V4 417 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 SYT14Q8NB59 555 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 OR5D13Q8NGL4 314 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 SSMEM1Q8WWF3 244 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 LRR1Q96L50 414 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 SH3GL2Q99962 352 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 MACROD1Q9BQ69 325 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 MECRQ9BV79 373 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 THAP1Q9NVV9 213 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 TAAR3PQ9P1P4 343 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 GRHPRQ9UBQ7 328 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 CLN8Q9UBY8 286 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 ZNF391Q9UJN7 358 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 ADAMTS6Q9UKP5 1117 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 AMMECR1Q9Y4X0 333 aaPredicted RBP2.52□□□□□ -2.01
CLOCK-209ENST00000511124 POLR3HQ9Y535 204 aaPredicted RBP2.52□□□□□ -2.01
CLOCK-209ENST00000511124 ZFC3H1O60293 1989 aaKnown RBP2.52□□□□□ -2.01
CLOCK-209ENST00000511124 ZFHX4Q86UP3 3567 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 EML5Q05BV3 1969 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 TRAPPC13A5PLN9 417 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 ZNF500O60304 480 aaPredicted RBP2.52□□□□□ -2.01
CLOCK-209ENST00000511124 TSPAN2O60636 221 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 PEX11AO75192 247 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 LYZL6O75951 148 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 ITGA5P08648 1049 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 PF4V1P10720 104 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 G6PDP11413 515 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 PAX1P15863 534 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 GRIA1P42261 906 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 DIO1P49895 249 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 EMDP50402 254 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 TPD52P55327 224 aaPredicted RBP2.52□□□□□ -2.01
CLOCK-209ENST00000511124 BSPH1Q075Z2 132 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 TNK1Q13470 666 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 NFYCQ13952 458 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 ZKSCAN8Q15776 578 aaPredicted RBP2.52□□□□□ -2.01
CLOCK-209ENST00000511124 ARHGAP11BQ3KRB8 267 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 LIAT1Q6ZQX7 453 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms