RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 BMP4P12644 408 aa16.34■□□□□ 0.21
UBE3D-207ENST00000509102 MDH1P40925 334 aaKnown RBP16.34■□□□□ 0.21
UBE3D-207ENST00000509102 ROR2Q01974 943 aaKnown RBP16.34■□□□□ 0.21
UBE3D-207ENST00000509102 VEZF1Q14119 521 aa16.34■□□□□ 0.21
UBE3D-207ENST00000509102 PGGHGQ32M88 737 aa16.34■□□□□ 0.21
UBE3D-207ENST00000509102 TBRG1Q3YBR2 411 aa16.34■□□□□ 0.21
UBE3D-207ENST00000509102 HIKESHIQ53FT3 197 aa16.34■□□□□ 0.21
UBE3D-207ENST00000509102 RABL3Q5HYI8 236 aa16.34■□□□□ 0.21
UBE3D-207ENST00000509102 CGB2Q6NT52 195 aa16.34■□□□□ 0.21
UBE3D-207ENST00000509102 ANKRD16Q6P6B7 361 aa16.34■□□□□ 0.21
UBE3D-207ENST00000509102 CLEC9AQ6UXN8 241 aa16.34■□□□□ 0.21
UBE3D-207ENST00000509102 CCDC80Q76M96 950 aa16.34■□□□□ 0.21
UBE3D-207ENST00000509102 GPR32P1Q8NGA4 272 aa16.34■□□□□ 0.21
UBE3D-207ENST00000509102 OR1K1Q8NGR3 316 aa16.34■□□□□ 0.21
UBE3D-207ENST00000509102 ADAMTS16Q8TE57 1224 aa16.34■□□□□ 0.21
UBE3D-207ENST00000509102 TAMM41Q96BW9 452 aa16.34■□□□□ 0.21
UBE3D-207ENST00000509102 BOD1Q96IK1 185 aa16.34■□□□□ 0.21
UBE3D-207ENST00000509102 MPP4Q96JB8 637 aa16.34■□□□□ 0.21
UBE3D-207ENST00000509102 HS6ST2Q96MM7 605 aa16.34■□□□□ 0.21
UBE3D-207ENST00000509102 GRIP2Q9C0E4 1043 aa16.34■□□□□ 0.21
UBE3D-207ENST00000509102 BARX1Q9HBU1 254 aaPredicted RBP16.34■□□□□ 0.21
UBE3D-207ENST00000509102 B3GAT2Q9NPZ5 323 aa16.34■□□□□ 0.21
UBE3D-207ENST00000509102 MRPL39Q9NYK5 338 aaKnown RBP16.34■□□□□ 0.21
UBE3D-207ENST00000509102 AP3M1Q9Y2T2 418 aa16.34■□□□□ 0.21
UBE3D-207ENST00000509102 NOX1Q9Y5S8 564 aa16.34■□□□□ 0.21
UBE3D-207ENST00000509102 ATP23Q9Y6H3 246 aa16.34■□□□□ 0.21
UBE3D-207ENST00000509102 OVOL3O00110 214 aa16.33■□□□□ 0.2
UBE3D-207ENST00000509102 TPST2O60704 377 aa16.33■□□□□ 0.2
UBE3D-207ENST00000509102 CCDC22O60826 627 aa16.33■□□□□ 0.2
UBE3D-207ENST00000509102 UPK3AO75631 287 aa16.33■□□□□ 0.2
UBE3D-207ENST00000509102 HOXB1P14653 301 aaPredicted RBP16.33■□□□□ 0.2
UBE3D-207ENST00000509102 AHCYP23526 432 aa16.33■□□□□ 0.2
UBE3D-207ENST00000509102 FABP6P51161 128 aa16.33■□□□□ 0.2
UBE3D-207ENST00000509102 POU3F1Q03052 451 aaPredicted RBP16.33■□□□□ 0.2
UBE3D-207ENST00000509102 PUDPQ08623 228 aa16.33■□□□□ 0.2
UBE3D-207ENST00000509102 ZNF544Q6NX49 715 aa16.33■□□□□ 0.2
UBE3D-207ENST00000509102 DTX2Q86UW9 622 aa16.33■□□□□ 0.2
UBE3D-207ENST00000509102 SLC41A3Q96GZ6 507 aa16.33■□□□□ 0.2
UBE3D-207ENST00000509102 COX4I2Q96KJ9 171 aa16.33■□□□□ 0.2
UBE3D-207ENST00000509102 ADAD1Q96M93 576 aaKnown RBP16.33■□□□□ 0.2
UBE3D-207ENST00000509102 TRAF4Q9BUZ4 470 aaPredicted RBP16.33■□□□□ 0.2
UBE3D-207ENST00000509102 GSX1Q9H4S2 264 aaPredicted RBP16.33■□□□□ 0.2
UBE3D-207ENST00000509102 B3GAT1Q9P2W7 334 aa16.33■□□□□ 0.2
UBE3D-207ENST00000509102 ZNF726A6NNF4 738 aa16.32■□□□□ 0.2
UBE3D-207ENST00000509102 RPL36A-HNRNPH2H7BZ11 118 aa16.32■□□□□ 0.2
UBE3D-207ENST00000509102 FXYD1O00168 92 aa16.32■□□□□ 0.2
UBE3D-207ENST00000509102 SMAD7O15105 426 aaKnown RBP16.32■□□□□ 0.2
UBE3D-207ENST00000509102 ATP8B1O43520 1251 aa16.32■□□□□ 0.2
UBE3D-207ENST00000509102 ZNF432O94892 652 aa16.32■□□□□ 0.2
UBE3D-207ENST00000509102 BGLAPP02818 100 aa16.32■□□□□ 0.2
UBE3D-207ENST00000509102 CADP27708 2225 aa16.32■□□□□ 0.2
UBE3D-207ENST00000509102 TTKP33981 857 aa16.32■□□□□ 0.2
UBE3D-207ENST00000509102 CDKN1AP38936 164 aa16.32■□□□□ 0.2
UBE3D-207ENST00000509102 SPOCK1Q08629 439 aa16.32■□□□□ 0.2
UBE3D-207ENST00000509102 ARPINQ7Z6K5 226 aa16.32■□□□□ 0.2
UBE3D-207ENST00000509102 MUC15Q8N387 334 aa16.32■□□□□ 0.2
UBE3D-207ENST00000509102 OR5J2Q8NH18 312 aa16.32■□□□□ 0.2
UBE3D-207ENST00000509102 MAGEE2Q8TD90 523 aaPredicted RBP16.32■□□□□ 0.2
UBE3D-207ENST00000509102 WFDC6Q9BQY6 131 aa16.32■□□□□ 0.2
UBE3D-207ENST00000509102 SLC19A3Q9BZV2 496 aa16.32■□□□□ 0.2
UBE3D-207ENST00000509102 SLC7A7Q9UM01 511 aa16.32■□□□□ 0.2
UBE3D-207ENST00000509102 SH3GLB1Q9Y371 365 aa16.32■□□□□ 0.2
UBE3D-207ENST00000509102 USF3Q68DE3 2245 aa16.31■□□□□ 0.2
UBE3D-207ENST00000509102 TRIM64A6NGJ6 449 aa16.31■□□□□ 0.2
UBE3D-207ENST00000509102 TRIM64BA6NI03 449 aa16.31■□□□□ 0.2
UBE3D-207ENST00000509102 E7EQL1 145 aa16.31■□□□□ 0.2
UBE3D-207ENST00000509102 TRAF3IP2O43734 574 aaPredicted RBP16.31■□□□□ 0.2
UBE3D-207ENST00000509102 CRYAAP02489 173 aa16.31■□□□□ 0.2
UBE3D-207ENST00000509102 HIST1H2ABP04908 130 aa16.31■□□□□ 0.2
UBE3D-207ENST00000509102 PTNP21246 168 aa16.31■□□□□ 0.2
UBE3D-207ENST00000509102 IFNA8P32881 189 aa16.31■□□□□ 0.2
UBE3D-207ENST00000509102 GZMMP51124 257 aa16.31■□□□□ 0.2
UBE3D-207ENST00000509102 TAS2R41P59536 307 aa16.31■□□□□ 0.2
UBE3D-207ENST00000509102 SLC25A3Q00325 362 aa16.31■□□□□ 0.2
UBE3D-207ENST00000509102 LGALS3BPQ08380 585 aa16.31■□□□□ 0.2
UBE3D-207ENST00000509102 NPTX1Q15818 432 aa16.31■□□□□ 0.2
UBE3D-207ENST00000509102 CLEC12BQ2HXU8 276 aa16.31■□□□□ 0.2
UBE3D-207ENST00000509102 HIST3H2AQ7L7L0 130 aa16.31■□□□□ 0.2
UBE3D-207ENST00000509102 PXKQ7Z7A4 578 aa16.31■□□□□ 0.2
UBE3D-207ENST00000509102 CALHM3Q86XJ0 350 aa16.31■□□□□ 0.2
UBE3D-207ENST00000509102 CCDC36Q8IYA8 594 aa16.31■□□□□ 0.2
UBE3D-207ENST00000509102 OR2T12Q8NG77 320 aa16.31■□□□□ 0.2
UBE3D-207ENST00000509102 RP9Q8TA86 221 aaKnown RBP16.31■□□□□ 0.2
UBE3D-207ENST00000509102 C10orf82Q8WW14 230 aa16.31■□□□□ 0.2
UBE3D-207ENST00000509102 HIST1H2ACQ93077 130 aa16.31■□□□□ 0.2
UBE3D-207ENST00000509102 MOGAT1Q96PD6 335 aa16.31■□□□□ 0.2
UBE3D-207ENST00000509102 OR2M2Q96R28 347 aa16.31■□□□□ 0.2
UBE3D-207ENST00000509102 POLR2J2Q9GZM3 115 aaKnown RBP16.31■□□□□ 0.2
UBE3D-207ENST00000509102 PCDHAC1Q9H158 963 aa16.31■□□□□ 0.2
UBE3D-207ENST00000509102 POLR2J3Q9H1A7 115 aaKnown RBP16.31■□□□□ 0.2
UBE3D-207ENST00000509102 CRLF2Q9HC73 371 aa16.31■□□□□ 0.2
UBE3D-207ENST00000509102 NANSQ9NR45 359 aa16.31■□□□□ 0.2
UBE3D-207ENST00000509102 CBLN4Q9NTU7 201 aa16.31■□□□□ 0.2
UBE3D-207ENST00000509102 NF1P21359 2839 aa16.31■□□□□ 0.2
UBE3D-207ENST00000509102 A0A096LPE4 126 aa16.3■□□□□ 0.2
UBE3D-207ENST00000509102 ARPC4-TTLL3A0A0A6YYG9 625 aa16.3■□□□□ 0.2
UBE3D-207ENST00000509102 A0A1W2PPZ6 126 aa16.3■□□□□ 0.2
UBE3D-207ENST00000509102 FAM220BPB1ANY3 271 aa16.3■□□□□ 0.2
UBE3D-207ENST00000509102 MS4A18H0YCH9 400 aa16.3■□□□□ 0.2
UBE3D-207ENST00000509102 SERPINI2O75830 405 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms