RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 GTDC1Q4AE62 458 aa4.04□□□□□ -1.76
NUP54-206ENST00000508465 GPAT3Q53EU6 434 aa4.04□□□□□ -1.76
NUP54-206ENST00000508465 AGKQ53H12 422 aa4.04□□□□□ -1.76
NUP54-206ENST00000508465 ATAD3BQ5T9A4 648 aa4.04□□□□□ -1.76
NUP54-206ENST00000508465 SAXO2Q658L1 398 aa4.04□□□□□ -1.76
NUP54-206ENST00000508465 BHLHB9Q6PI77 547 aa4.04□□□□□ -1.76
NUP54-206ENST00000508465 FAM90A1Q86YD7 464 aa4.04□□□□□ -1.76
NUP54-206ENST00000508465 LURAP1LQ8IV03 231 aa4.04□□□□□ -1.76
NUP54-206ENST00000508465 FUNDC1Q8IVP5 155 aa4.04□□□□□ -1.76
NUP54-206ENST00000508465 TMCO5AQ8N6Q1 288 aa4.04□□□□□ -1.76
NUP54-206ENST00000508465 ANKFN1Q8N957 763 aa4.04□□□□□ -1.76
NUP54-206ENST00000508465 ZNF527Q8NB42 609 aa4.04□□□□□ -1.76
NUP54-206ENST00000508465 CHDHQ8NE62 594 aaPredicted RBP4.04□□□□□ -1.76
NUP54-206ENST00000508465 MBD3L2Q8NHZ7 208 aaPredicted RBP4.04□□□□□ -1.76
NUP54-206ENST00000508465 FNDC9Q8TBE3 224 aa4.04□□□□□ -1.76
NUP54-206ENST00000508465 RAB3IL1Q8TBN0 382 aa4.04□□□□□ -1.76
NUP54-206ENST00000508465 CKAP2Q8WWK9 683 aa4.04□□□□□ -1.76
NUP54-206ENST00000508465 CNOT9Q92600 299 aaKnown RBP4.04□□□□□ -1.76
NUP54-206ENST00000508465 OSTF1Q92882 214 aa4.04□□□□□ -1.76
NUP54-206ENST00000508465 TESCQ96BS2 214 aa4.04□□□□□ -1.76
NUP54-206ENST00000508465 MOAP1Q96BY2 351 aa4.04□□□□□ -1.76
NUP54-206ENST00000508465 ROPN1LQ96C74 230 aa4.04□□□□□ -1.76
NUP54-206ENST00000508465 STARD4Q96DR4 205 aa4.04□□□□□ -1.76
NUP54-206ENST00000508465 NEURL3Q96EH8 262 aa4.04□□□□□ -1.76
NUP54-206ENST00000508465 AURKBQ96GD4 344 aaPredicted RBP4.04□□□□□ -1.76
NUP54-206ENST00000508465 LURAP1Q96LR2 239 aa4.04□□□□□ -1.76
NUP54-206ENST00000508465 MOGAT1Q96PD6 335 aa4.04□□□□□ -1.76
NUP54-206ENST00000508465 PANX1Q96RD7 426 aa4.04□□□□□ -1.76
NUP54-206ENST00000508465 SIGLEC11Q96RL6 698 aa4.04□□□□□ -1.76
NUP54-206ENST00000508465 ZNF559Q9BR84 538 aa4.04□□□□□ -1.76
NUP54-206ENST00000508465 PIGQQ9BRB3 760 aa4.04□□□□□ -1.76
NUP54-206ENST00000508465 THUMPD3Q9BV44 507 aaKnown RBP4.04□□□□□ -1.76
NUP54-206ENST00000508465 PINK1Q9BXM7 581 aa4.04□□□□□ -1.76
NUP54-206ENST00000508465 PRRG4Q9BZD6 226 aa4.04□□□□□ -1.76
NUP54-206ENST00000508465 HOXD1Q9GZZ0 328 aa4.04□□□□□ -1.76
NUP54-206ENST00000508465 OPN3Q9H1Y3 402 aaPredicted RBP4.04□□□□□ -1.76
NUP54-206ENST00000508465 LIME1Q9H400 295 aa4.04□□□□□ -1.76
NUP54-206ENST00000508465 INTS9Q9NV88 658 aaKnown RBP4.04□□□□□ -1.76
NUP54-206ENST00000508465 CLCF1Q9UBD9 225 aa4.04□□□□□ -1.76
NUP54-206ENST00000508465 ZNF69Q9UC07 566 aa4.04□□□□□ -1.76
NUP54-206ENST00000508465 ZNF629Q9UEG4 869 aaPredicted RBP4.04□□□□□ -1.76
NUP54-206ENST00000508465 BTNL2Q9UIR0 455 aa4.04□□□□□ -1.76
NUP54-206ENST00000508465 DTNAQ9Y4J8 743 aa4.04□□□□□ -1.76
NUP54-206ENST00000508465 AP4B1Q9Y6B7 739 aa4.04□□□□□ -1.76
NUP54-206ENST00000508465 INTS1Q8N201 2190 aaKnown RBP4.04□□□□□ -1.76
NUP54-206ENST00000508465 HCFC1P51610 2035 aa4.04□□□□□ -1.76
NUP54-206ENST00000508465 POLQO75417 2590 aa4.04□□□□□ -1.76
NUP54-206ENST00000508465 CACNA1CQ13936 2221 aa4.03□□□□□ -1.76
NUP54-206ENST00000508465 CREBBPQ92793 2442 aa4.03□□□□□ -1.76
NUP54-206ENST00000508465 MPDZO75970 2070 aa4.03□□□□□ -1.76
NUP54-206ENST00000508465 CSMD1Q96PZ7 3565 aa4.03□□□□□ -1.76
NUP54-206ENST00000508465 A0A087WZY1 265 aa4.03□□□□□ -1.76
NUP54-206ENST00000508465 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.03□□□□□ -1.76
NUP54-206ENST00000508465 IGHV3-15A0A0B4J1V0 119 aa4.03□□□□□ -1.76
NUP54-206ENST00000508465 A0A1W2PQD3 144 aa4.03□□□□□ -1.76
NUP54-206ENST00000508465 FAM234BA2RU67 622 aa4.03□□□□□ -1.76
NUP54-206ENST00000508465 DUXAA6NLW8 204 aa4.03□□□□□ -1.76
NUP54-206ENST00000508465 NR5A2O00482 541 aa4.03□□□□□ -1.76
NUP54-206ENST00000508465 AP3D1O14617 1153 aa4.03□□□□□ -1.76
NUP54-206ENST00000508465 KLF11O14901 512 aa4.03□□□□□ -1.76
NUP54-206ENST00000508465 ZNF264O43296 627 aa4.03□□□□□ -1.76
NUP54-206ENST00000508465 UGT2B17O75795 530 aa4.03□□□□□ -1.76
NUP54-206ENST00000508465 TNFSF13O75888 250 aa4.03□□□□□ -1.76
NUP54-206ENST00000508465 TGDSO95455 350 aa4.03□□□□□ -1.76
NUP54-206ENST00000508465 SYNGR4O95473 234 aa4.03□□□□□ -1.76
NUP54-206ENST00000508465 ANP32DO95626 131 aa4.03□□□□□ -1.76
NUP54-206ENST00000508465 AGR2O95994 175 aa4.03□□□□□ -1.76
NUP54-206ENST00000508465 CSTAP01040 98 aa4.03□□□□□ -1.76
NUP54-206ENST00000508465 IL6P05231 212 aa4.03□□□□□ -1.76
NUP54-206ENST00000508465 CHRM4P08173 479 aa4.03□□□□□ -1.76
NUP54-206ENST00000508465 KRT16P08779 473 aa4.03□□□□□ -1.76
NUP54-206ENST00000508465 UBL4AP11441 157 aa4.03□□□□□ -1.76
NUP54-206ENST00000508465 PSG1P11464 419 aa4.03□□□□□ -1.76
NUP54-206ENST00000508465 PSMA4P25789 261 aaKnown RBP4.03□□□□□ -1.76
NUP54-206ENST00000508465 SSTR2P30874 369 aa4.03□□□□□ -1.76
NUP54-206ENST00000508465 LCN1P31025 176 aa4.03□□□□□ -1.76
NUP54-206ENST00000508465 OPRM1P35372 400 aa4.03□□□□□ -1.76
NUP54-206ENST00000508465 CRATP43155 626 aa4.03□□□□□ -1.76
NUP54-206ENST00000508465 KHKP50053 298 aa4.03□□□□□ -1.76
NUP54-206ENST00000508465 ASCL1P50553 236 aa4.03□□□□□ -1.76
NUP54-206ENST00000508465 P2RX1P51575 399 aa4.03□□□□□ -1.76
NUP54-206ENST00000508465 HOXC5Q00444 222 aa4.03□□□□□ -1.76
NUP54-206ENST00000508465 FOXF1Q12946 379 aa4.03□□□□□ -1.76
NUP54-206ENST00000508465 BLMHQ13867 455 aa4.03□□□□□ -1.76
NUP54-206ENST00000508465 GANABQ14697 944 aaKnown RBP4.03□□□□□ -1.76
NUP54-206ENST00000508465 QPRTQ15274 297 aa4.03□□□□□ -1.76
NUP54-206ENST00000508465 MAPK11Q15759 364 aa4.03□□□□□ -1.76
NUP54-206ENST00000508465 ZNF141Q15928 474 aa4.03□□□□□ -1.76
NUP54-206ENST00000508465 GSTA3Q16772 222 aa4.03□□□□□ -1.76
NUP54-206ENST00000508465 CTU2Q2VPK5 515 aaKnown RBP4.03□□□□□ -1.76
NUP54-206ENST00000508465 PAGE3Q5JUK9 113 aa4.03□□□□□ -1.76
NUP54-206ENST00000508465 FAM209BQ5JX69 171 aa4.03□□□□□ -1.76
NUP54-206ENST00000508465 C6orf10Q5SRN2 563 aa4.03□□□□□ -1.76
NUP54-206ENST00000508465 HBMQ6B0K9 141 aa4.03□□□□□ -1.76
NUP54-206ENST00000508465 TYW3Q6IPR3 259 aaKnown RBP4.03□□□□□ -1.76
NUP54-206ENST00000508465 HEPHL1Q6MZM0 1159 aa4.03□□□□□ -1.76
NUP54-206ENST00000508465 RGS7BPQ6MZT1 257 aaPredicted RBP4.03□□□□□ -1.76
NUP54-206ENST00000508465 ZNF474Q6S9Z5 364 aaPredicted RBP4.03□□□□□ -1.76
NUP54-206ENST00000508465 FRRS1Q6ZNA5 592 aa4.03□□□□□ -1.76
NUP54-206ENST00000508465 EIF3MQ7L2H7 374 aaKnown RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms