RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 ADAD1Q96M93 576 aaKnown RBP17.87■□□□□ 0.45
USP53-203ENST00000507597 DCLRE1BQ9H816 532 aa17.87■□□□□ 0.45
USP53-203ENST00000507597 VNN3Q9NY84 501 aa17.87■□□□□ 0.45
USP53-203ENST00000507597 Q9UFV3 132 aa17.87■□□□□ 0.45
USP53-203ENST00000507597 CLEC4AQ9UMR7 237 aa17.87■□□□□ 0.45
USP53-203ENST00000507597 RNF6Q9Y252 685 aa17.87■□□□□ 0.45
USP53-203ENST00000507597 FLVCR1Q9Y5Y0 555 aa17.87■□□□□ 0.45
USP53-203ENST00000507597 CFAP46Q8IYW2 2715 aa17.87■□□□□ 0.45
USP53-203ENST00000507597 MCIDASD6RGH6 385 aa17.86■□□□□ 0.45
USP53-203ENST00000507597 H3BNX3 289 aa17.86■□□□□ 0.45
USP53-203ENST00000507597 GASTP01350 101 aa17.86■□□□□ 0.45
USP53-203ENST00000507597 TSPAN19P0C672 248 aa17.86■□□□□ 0.45
USP53-203ENST00000507597 NR2C1P13056 603 aa17.86■□□□□ 0.45
USP53-203ENST00000507597 SIRPAP78324 504 aa17.86■□□□□ 0.45
USP53-203ENST00000507597 ELF3P78545 371 aaPredicted RBP17.86■□□□□ 0.45
USP53-203ENST00000507597 POU3F1Q03052 451 aaPredicted RBP17.86■□□□□ 0.45
USP53-203ENST00000507597 SMARCD3Q6STE5 483 aa17.86■□□□□ 0.45
USP53-203ENST00000507597 CD300LDQ6UXZ3 194 aa17.86■□□□□ 0.45
USP53-203ENST00000507597 RASSF6Q6ZTQ3 369 aa17.86■□□□□ 0.45
USP53-203ENST00000507597 AAED1Q7RTV5 226 aa17.86■□□□□ 0.45
USP53-203ENST00000507597 ABHD12BQ7Z5M8 362 aaPredicted RBP17.86■□□□□ 0.45
USP53-203ENST00000507597 MRGPRGQ86SM5 289 aa17.86■□□□□ 0.45
USP53-203ENST00000507597 FAM26EQ8N5C1 309 aa17.86■□□□□ 0.45
USP53-203ENST00000507597 TNFRSF13CQ96RJ3 184 aa17.86■□□□□ 0.45
USP53-203ENST00000507597 FEVQ99581 238 aa17.86■□□□□ 0.45
USP53-203ENST00000507597 PKP2Q99959 881 aa17.86■□□□□ 0.45
USP53-203ENST00000507597 TEX12Q9BXU0 123 aa17.86■□□□□ 0.45
USP53-203ENST00000507597 UCK2Q9BZX2 261 aa17.86■□□□□ 0.45
USP53-203ENST00000507597 NTN4Q9HB63 628 aa17.86■□□□□ 0.45
USP53-203ENST00000507597 TAS2R5Q9NYW4 299 aa17.86■□□□□ 0.45
USP53-203ENST00000507597 RCE1Q9Y256 329 aa17.86■□□□□ 0.45
USP53-203ENST00000507597 ZNF462Q96JM2 2506 aa17.86■□□□□ 0.45
USP53-203ENST00000507597 NPIPB13A6NJU9 1138 aa17.85■□□□□ 0.45
USP53-203ENST00000507597 KDM4EB2RXH2 506 aaPredicted RBP17.85■□□□□ 0.45
USP53-203ENST00000507597 ZNF814B7Z6K7 855 aa17.85■□□□□ 0.45
USP53-203ENST00000507597 NPIPB4C9JG80 1138 aa17.85■□□□□ 0.45
USP53-203ENST00000507597 MSTNO14793 375 aa17.85■□□□□ 0.45
USP53-203ENST00000507597 BCL10O95999 233 aa17.85■□□□□ 0.45
USP53-203ENST00000507597 CD8BP10966 210 aa17.85■□□□□ 0.45
USP53-203ENST00000507597 BMP5P22003 454 aa17.85■□□□□ 0.45
USP53-203ENST00000507597 SLC6A6P31641 620 aa17.85■□□□□ 0.45
USP53-203ENST00000507597 UQCRC1P31930 480 aa17.85■□□□□ 0.45
USP53-203ENST00000507597 AQP2P41181 271 aa17.85■□□□□ 0.45
USP53-203ENST00000507597 KIR2DL2P43627 348 aaPredicted RBP17.85■□□□□ 0.45
USP53-203ENST00000507597 RPS4XP62701 263 aaKnown RBP17.85■□□□□ 0.45
USP53-203ENST00000507597 LSM11P83369 360 aaKnown RBP eCLIP17.85■□□□□ 0.45
USP53-203ENST00000507597 RPL18Q07020 188 aaKnown RBP17.85■□□□□ 0.45
USP53-203ENST00000507597 GUSBP1Q15486 140 aa17.85■□□□□ 0.45
USP53-203ENST00000507597 FAM205BPQ63HN1 556 aa17.85■□□□□ 0.45
USP53-203ENST00000507597 ZNF770Q6IQ21 691 aaPredicted RBP17.85■□□□□ 0.45
USP53-203ENST00000507597 PLXDC2Q6UX71 529 aa17.85■□□□□ 0.45
USP53-203ENST00000507597 KDM8Q8N371 416 aa17.85■□□□□ 0.45
USP53-203ENST00000507597 CLDN22Q8N7P3 220 aa17.85■□□□□ 0.45
USP53-203ENST00000507597 OR13C2Q8NGS9 318 aa17.85■□□□□ 0.45
USP53-203ENST00000507597 LILRB4Q8NHJ6 448 aa17.85■□□□□ 0.45
USP53-203ENST00000507597 APH1AQ96BI3 265 aa17.85■□□□□ 0.45
USP53-203ENST00000507597 C9orf16Q9BUW7 83 aa17.85■□□□□ 0.45
USP53-203ENST00000507597 SEMA6AQ9H2E6 1030 aa17.85■□□□□ 0.45
USP53-203ENST00000507597 PLSCR4Q9NRQ2 329 aa17.85■□□□□ 0.45
USP53-203ENST00000507597 SIGLEC7Q9Y286 467 aa17.85■□□□□ 0.45
USP53-203ENST00000507597 ORC6Q9Y5N6 252 aa17.85■□□□□ 0.45
USP53-203ENST00000507597 PHF3Q92576 2039 aaKnown RBP17.84■□□□□ 0.45
USP53-203ENST00000507597 TRAV27A0A087WT01 109 aa17.84■□□□□ 0.45
USP53-203ENST00000507597 CDC42EP2O14613 210 aa17.84■□□□□ 0.45
USP53-203ENST00000507597 KLF4O43474 513 aa17.84■□□□□ 0.45
USP53-203ENST00000507597 PTP4A3O75365 173 aa17.84■□□□□ 0.45
USP53-203ENST00000507597 SMNDC1O75940 238 aaKnown RBP eCLIP17.84■□□□□ 0.45
USP53-203ENST00000507597 CNOT4O95628 575 aaKnown RBP17.84■□□□□ 0.45
USP53-203ENST00000507597 POU2F1P14859 743 aa17.84■□□□□ 0.45
USP53-203ENST00000507597 RPS6KA3P51812 740 aa17.84■□□□□ 0.45
USP53-203ENST00000507597 IST1P53990 364 aa17.84■□□□□ 0.45
USP53-203ENST00000507597 CLDN17P56750 224 aa17.84■□□□□ 0.45
USP53-203ENST00000507597 CTXN1P60606 82 aa17.84■□□□□ 0.45
USP53-203ENST00000507597 ADORA2A-AS1P86434 159 aa17.84■□□□□ 0.45
USP53-203ENST00000507597 LAPTM4AQ15012 233 aa17.84■□□□□ 0.45
USP53-203ENST00000507597 RFX4Q33E94 735 aa17.84■□□□□ 0.45
USP53-203ENST00000507597 CASP12Q6UXS9 341 aa17.84■□□□□ 0.45
USP53-203ENST00000507597 BEND4Q6ZU67 534 aa17.84■□□□□ 0.45
USP53-203ENST00000507597 SLC35D2Q76EJ3 337 aa17.84■□□□□ 0.45
USP53-203ENST00000507597 CCDC71Q8IV32 467 aaPredicted RBP17.84■□□□□ 0.45
USP53-203ENST00000507597 FANK1Q8TC84 345 aa17.84■□□□□ 0.45
USP53-203ENST00000507597 GTPBP3Q969Y2 492 aaKnown RBP17.84■□□□□ 0.45
USP53-203ENST00000507597 RBM4BQ9BQ04 359 aaKnown RBP17.84■□□□□ 0.45
USP53-203ENST00000507597 RBM4Q9BWF3 364 aaKnown RBP17.84■□□□□ 0.45
USP53-203ENST00000507597 KCNJ16Q9NPI9 418 aa17.84■□□□□ 0.45
USP53-203ENST00000507597 B3GAT2Q9NPZ5 323 aa17.84■□□□□ 0.45
USP53-203ENST00000507597 UPB1Q9UBR1 384 aa17.84■□□□□ 0.45
USP53-203ENST00000507597 SEC14L4Q9UDX3 406 aa17.84■□□□□ 0.45
USP53-203ENST00000507597 FOXD3Q9UJU5 478 aaPredicted RBP17.84■□□□□ 0.45
USP53-203ENST00000507597 POFUT2Q9Y2G5 429 aa17.84■□□□□ 0.45
USP53-203ENST00000507597 RAMP1O60894 148 aa17.83■□□□□ 0.44
USP53-203ENST00000507597 SLC43A1O75387 559 aa17.83■□□□□ 0.44
USP53-203ENST00000507597 SERPINI2O75830 405 aa17.83■□□□□ 0.44
USP53-203ENST00000507597 TNFSF13O75888 250 aa17.83■□□□□ 0.44
USP53-203ENST00000507597 KRT33AO76009 404 aa17.83■□□□□ 0.44
USP53-203ENST00000507597 CD14P08571 375 aa17.83■□□□□ 0.44
USP53-203ENST00000507597 CDH2P19022 906 aaPredicted RBP17.83■□□□□ 0.44
USP53-203ENST00000507597 FOXF2Q12947 444 aa17.83■□□□□ 0.44
USP53-203ENST00000507597 RCN1Q15293 331 aa17.83■□□□□ 0.44
USP53-203ENST00000507597 GPR139Q6DWJ6 353 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms