RNA–Protein interactions for RNA: ENST00000507075.1

ARRDC3-204, Transcript of arrestin domain containing 3, human

TSL 2

Gene ARRDC3, Length 355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARRDC3-204	ENST00000507075	PSMA2	P25787	234 aa		0.55	□□□□□ -2.32
ARRDC3-204	ENST00000507075	BTC	P35070	178 aa		0.55	□□□□□ -2.32
ARRDC3-204	ENST00000507075	OPRK1	P41145	380 aa		0.55	□□□□□ -2.32
ARRDC3-204	ENST00000507075	PTGFR	P43088	359 aa		0.55	□□□□□ -2.32
ARRDC3-204	ENST00000507075	HSPA2	P54652	639 aa		0.55	□□□□□ -2.32
ARRDC3-204	ENST00000507075	TNFRSF17	Q02223	184 aa		0.55	□□□□□ -2.32
ARRDC3-204	ENST00000507075	ACVR1	Q04771	509 aa		0.55	□□□□□ -2.32
ARRDC3-204	ENST00000507075	IYD	Q6PHW0	289 aa		0.55	□□□□□ -2.32
ARRDC3-204	ENST00000507075	CCDC91	Q7Z6B0	441 aa		0.55	□□□□□ -2.32
ARRDC3-204	ENST00000507075	GMCL1P1	Q8NEA9	526 aa		0.55	□□□□□ -2.32
ARRDC3-204	ENST00000507075	ZNF680	Q8NEM1	530 aa		0.55	□□□□□ -2.32
ARRDC3-204	ENST00000507075	OR10A7	Q8NGE5	316 aa		0.55	□□□□□ -2.32
ARRDC3-204	ENST00000507075	PTP4A1	Q93096	173 aa		0.55	□□□□□ -2.32
ARRDC3-204	ENST00000507075	NSMCE2	Q96MF7	247 aa		0.55	□□□□□ -2.32
ARRDC3-204	ENST00000507075	TSSK3	Q96PN8	268 aa		0.55	□□□□□ -2.32
ARRDC3-204	ENST00000507075	LZTS2	Q9BRK4	669 aa		0.55	□□□□□ -2.32
ARRDC3-204	ENST00000507075	ACTR6	Q9GZN1	396 aa		0.55	□□□□□ -2.32
ARRDC3-204	ENST00000507075	NXF5	Q9H1B4	397 aa	Known RBP	0.55	□□□□□ -2.32
ARRDC3-204	ENST00000507075	C2orf40	Q9H1Z8	148 aa		0.55	□□□□□ -2.32
ARRDC3-204	ENST00000507075	RNF167	Q9H6Y7	350 aa		0.55	□□□□□ -2.32
ARRDC3-204	ENST00000507075	SGK2	Q9HBY8	427 aa		0.55	□□□□□ -2.32
ARRDC3-204	ENST00000507075	FBXO6	Q9NRD1	293 aa	Predicted RBP	0.55	□□□□□ -2.32
ARRDC3-204	ENST00000507075	SEC14L3	Q9UDX4	400 aa		0.55	□□□□□ -2.32
ARRDC3-204	ENST00000507075	FRMPD4	Q14CM0	1322 aa		0.55	□□□□□ -2.32
ARRDC3-204	ENST00000507075	COL11A1	P12107	1806 aa	Predicted RBP	0.54	□□□□□ -2.32
ARRDC3-204	ENST00000507075	ANKRD12	Q6UB98	2062 aa		0.54	□□□□□ -2.32
ARRDC3-204	ENST00000507075	IGHV3OR16-8	A0A075B7F1	116 aa		0.54	□□□□□ -2.32
ARRDC3-204	ENST00000507075	FAM230A	A0A1W2PPH8	454 aa		0.54	□□□□□ -2.32
ARRDC3-204	ENST00000507075	CIB4	A0PJX0	185 aa		0.54	□□□□□ -2.32
ARRDC3-204	ENST00000507075	CCDC182	A6NF36	153 aa		0.54	□□□□□ -2.32
ARRDC3-204	ENST00000507075		H0YHG0	523 aa		0.54	□□□□□ -2.32
ARRDC3-204	ENST00000507075	DDX39A	O00148	427 aa	Known RBP	0.54	□□□□□ -2.32
ARRDC3-204	ENST00000507075	SSX5	O60225	188 aa		0.54	□□□□□ -2.32
ARRDC3-204	ENST00000507075	FMO6P	O60774	539 aa		0.54	□□□□□ -2.32
ARRDC3-204	ENST00000507075	TOM1L1	O75674	476 aa		0.54	□□□□□ -2.32
ARRDC3-204	ENST00000507075	GABARAP	O95166	117 aa		0.54	□□□□□ -2.32
ARRDC3-204	ENST00000507075	CA1	P00915	261 aa	Predicted RBP	0.54	□□□□□ -2.32
ARRDC3-204	ENST00000507075	CA3	P07451	260 aa		0.54	□□□□□ -2.32
ARRDC3-204	ENST00000507075	TGFBR2	P37173	567 aa		0.54	□□□□□ -2.32
ARRDC3-204	ENST00000507075	SLC11A1	P49279	550 aa		0.54	□□□□□ -2.32
ARRDC3-204	ENST00000507075	AP3M2	P53677	418 aa		0.54	□□□□□ -2.32
ARRDC3-204	ENST00000507075	SLC26A5	P58743	744 aa		0.54	□□□□□ -2.32
ARRDC3-204	ENST00000507075	STARD6	P59095	220 aa		0.54	□□□□□ -2.32
ARRDC3-204	ENST00000507075	EWSR1	Q01844	656 aa	Known RBP eCLIP	0.54	□□□□□ -2.32
ARRDC3-204	ENST00000507075	RPA4	Q13156	261 aa		0.54	□□□□□ -2.32
ARRDC3-204	ENST00000507075	PRPSAP1	Q14558	356 aa		0.54	□□□□□ -2.32
ARRDC3-204	ENST00000507075	RABL6	Q3YEC7	729 aa	Predicted RBP	0.54	□□□□□ -2.32
ARRDC3-204	ENST00000507075	CASP12	Q6UXS9	341 aa		0.54	□□□□□ -2.32
ARRDC3-204	ENST00000507075	WDR88	Q6ZMY6	472 aa		0.54	□□□□□ -2.32
ARRDC3-204	ENST00000507075	STRADA	Q7RTN6	431 aa		0.54	□□□□□ -2.32
ARRDC3-204	ENST00000507075	ANKRD23	Q86SG2	305 aa		0.54	□□□□□ -2.32
ARRDC3-204	ENST00000507075	CALHM1	Q8IU99	346 aa		0.54	□□□□□ -2.32
ARRDC3-204	ENST00000507075	CBWD2	Q8IUF1	395 aa		0.54	□□□□□ -2.32
ARRDC3-204	ENST00000507075	CNTN4	Q8IWV2	1026 aa		0.54	□□□□□ -2.32
ARRDC3-204	ENST00000507075	MREG	Q8N565	214 aa		0.54	□□□□□ -2.32
ARRDC3-204	ENST00000507075	RNF148	Q8N7C7	305 aa		0.54	□□□□□ -2.32
ARRDC3-204	ENST00000507075	APCDD1L	Q8NCL9	501 aa		0.54	□□□□□ -2.32
ARRDC3-204	ENST00000507075	FBXL13	Q8NEE6	735 aa		0.54	□□□□□ -2.32
ARRDC3-204	ENST00000507075	OR5M1	Q8NGP8	315 aa		0.54	□□□□□ -2.32
ARRDC3-204	ENST00000507075	URGCP	Q8TCY9	931 aa		0.54	□□□□□ -2.32
ARRDC3-204	ENST00000507075	GEMIN6	Q8WXD5	167 aa	Known RBP	0.54	□□□□□ -2.32
ARRDC3-204	ENST00000507075	CREB3L1	Q96BA8	519 aa		0.54	□□□□□ -2.32
ARRDC3-204	ENST00000507075	CMTM7	Q96FZ5	175 aa		0.54	□□□□□ -2.32
ARRDC3-204	ENST00000507075	SPATA13	Q96N96	652 aa		0.54	□□□□□ -2.32
ARRDC3-204	ENST00000507075	WFIKKN1	Q96NZ8	548 aa		0.54	□□□□□ -2.32
ARRDC3-204	ENST00000507075	ZSCAN5A	Q9BUG6	496 aa		0.54	□□□□□ -2.32
ARRDC3-204	ENST00000507075	PARP12	Q9H0J9	701 aa	Known RBP	0.54	□□□□□ -2.32
ARRDC3-204	ENST00000507075	DHX33	Q9H6R0	707 aa	Known RBP	0.54	□□□□□ -2.32
ARRDC3-204	ENST00000507075	ROPN1	Q9HAT0	212 aa	Predicted RBP	0.54	□□□□□ -2.32
ARRDC3-204	ENST00000507075	ISYNA1	Q9NPH2	558 aa		0.54	□□□□□ -2.32
ARRDC3-204	ENST00000507075	CYP39A1	Q9NYL5	469 aa		0.54	□□□□□ -2.32
ARRDC3-204	ENST00000507075	ZNF639	Q9UID6	485 aa		0.54	□□□□□ -2.32
ARRDC3-204	ENST00000507075	STRAP	Q9Y3F4	350 aa	Known RBP	0.54	□□□□□ -2.32
ARRDC3-204	ENST00000507075	DHX29	Q7Z478	1369 aa	Known RBP	0.54	□□□□□ -2.32
ARRDC3-204	ENST00000507075		A0A1W2PNV4	684 aa		0.53	□□□□□ -2.32
ARRDC3-204	ENST00000507075	CFAP73	A6NFT4	308 aa		0.53	□□□□□ -2.32
ARRDC3-204	ENST00000507075	ZNF98	A6NK75	572 aa		0.53	□□□□□ -2.32
ARRDC3-204	ENST00000507075	CCER2	I3L3R5	266 aa		0.53	□□□□□ -2.32
ARRDC3-204	ENST00000507075	CLDN5	O00501	218 aa		0.53	□□□□□ -2.32
ARRDC3-204	ENST00000507075	RASGRF2	O14827	1237 aa		0.53	□□□□□ -2.32
ARRDC3-204	ENST00000507075	B3GAT3	O94766	335 aa		0.53	□□□□□ -2.32
ARRDC3-204	ENST00000507075	LRAT	O95237	230 aa		0.53	□□□□□ -2.32
ARRDC3-204	ENST00000507075	HMOX1	P09601	288 aa		0.53	□□□□□ -2.32
ARRDC3-204	ENST00000507075	GDI2	P50395	445 aa	Known RBP	0.53	□□□□□ -2.32
ARRDC3-204	ENST00000507075	CRYBB1	P53674	252 aa	Predicted RBP	0.53	□□□□□ -2.32
ARRDC3-204	ENST00000507075	GABPB1	Q06547	395 aa	Predicted RBP	0.53	□□□□□ -2.32
ARRDC3-204	ENST00000507075	IHH	Q14623	411 aa		0.53	□□□□□ -2.32
ARRDC3-204	ENST00000507075	C2orf76	Q3KRA6	126 aa		0.53	□□□□□ -2.32
ARRDC3-204	ENST00000507075	LINC01620	Q4KN68	170 aa		0.53	□□□□□ -2.32
ARRDC3-204	ENST00000507075	SMUG1	Q53HV7	270 aa		0.53	□□□□□ -2.32
ARRDC3-204	ENST00000507075	KDM7A	Q6ZMT4	941 aa		0.53	□□□□□ -2.32
ARRDC3-204	ENST00000507075	DPY19L4	Q7Z388	723 aa		0.53	□□□□□ -2.32
ARRDC3-204	ENST00000507075	OAF	Q86UD1	273 aa		0.53	□□□□□ -2.32
ARRDC3-204	ENST00000507075	MINDY2	Q8NBR6	621 aa		0.53	□□□□□ -2.32
ARRDC3-204	ENST00000507075	FAM71C	Q8NEG0	241 aa		0.53	□□□□□ -2.32
ARRDC3-204	ENST00000507075	VN1R2	Q8NFZ6	395 aa		0.53	□□□□□ -2.32
ARRDC3-204	ENST00000507075	OR56B1	Q8NGI3	324 aa		0.53	□□□□□ -2.32
ARRDC3-204	ENST00000507075	OR13G1	Q8NGZ3	307 aa		0.53	□□□□□ -2.32
ARRDC3-204	ENST00000507075	LINC01560	Q8TB33	94 aa		0.53	□□□□□ -2.32
ARRDC3-204	ENST00000507075	NEURL3	Q96EH8	262 aa		0.53	□□□□□ -2.32

Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms