RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 A8MXQ7 604 aa1.66□□□□□ -2.14
GYPB-207ENST00000506679 NDC80O14777 642 aa1.66□□□□□ -2.14
GYPB-207ENST00000506679 MED7O43513 233 aa1.66□□□□□ -2.14
GYPB-207ENST00000506679 SNNO75324 88 aaPredicted RBP1.66□□□□□ -2.14
GYPB-207ENST00000506679 SUPT3HO75486 399 aa1.66□□□□□ -2.14
GYPB-207ENST00000506679 SPAG6O75602 509 aa1.66□□□□□ -2.14
GYPB-207ENST00000506679 SCGNO76038 276 aa1.66□□□□□ -2.14
GYPB-207ENST00000506679 OXSR1O95747 527 aaPredicted RBP1.66□□□□□ -2.14
GYPB-207ENST00000506679 RETP07949 1114 aa1.66□□□□□ -2.14
GYPB-207ENST00000506679 HSMCR30P0CW71 290 aa1.66□□□□□ -2.14
GYPB-207ENST00000506679 IGFBP3P17936 291 aaPredicted RBP1.66□□□□□ -2.14
GYPB-207ENST00000506679 HMGB2P26583 209 aaKnown RBP1.66□□□□□ -2.14
GYPB-207ENST00000506679 CALRP27797 417 aaKnown RBP1.66□□□□□ -2.14
GYPB-207ENST00000506679 GNA11P29992 359 aa1.66□□□□□ -2.14
GYPB-207ENST00000506679 CCR1P32246 355 aa1.66□□□□□ -2.14
GYPB-207ENST00000506679 CCT3P49368 545 aaKnown RBP1.66□□□□□ -2.14
GYPB-207ENST00000506679 FGF8P55075 233 aaPredicted RBP1.66□□□□□ -2.14
GYPB-207ENST00000506679 SPIBQ01892 262 aa1.66□□□□□ -2.14
GYPB-207ENST00000506679 ACVR1Q04771 509 aa1.66□□□□□ -2.14
GYPB-207ENST00000506679 REG3AQ06141 175 aa1.66□□□□□ -2.14
GYPB-207ENST00000506679 NCBP1Q09161 790 aaKnown RBP1.66□□□□□ -2.14
GYPB-207ENST00000506679 OR5I1Q13606 314 aa1.66□□□□□ -2.14
GYPB-207ENST00000506679 GGTLC2Q14390 218 aa1.66□□□□□ -2.14
GYPB-207ENST00000506679 SGCAQ16586 387 aa1.66□□□□□ -2.14
GYPB-207ENST00000506679 RFX4Q33E94 735 aa1.66□□□□□ -2.14
GYPB-207ENST00000506679 FILIP1LQ4L180 1135 aa1.66□□□□□ -2.14
GYPB-207ENST00000506679 GET4Q7L5D6 327 aaPredicted RBP1.66□□□□□ -2.14
GYPB-207ENST00000506679 TRIM69Q86WT6 500 aa1.66□□□□□ -2.14
GYPB-207ENST00000506679 ZNF540Q8NDQ6 660 aa1.66□□□□□ -2.14
GYPB-207ENST00000506679 IPMKQ8NFU5 416 aa1.66□□□□□ -2.14
GYPB-207ENST00000506679 DTX3LQ8TDB6 740 aa1.66□□□□□ -2.14
GYPB-207ENST00000506679 MCOLN3Q8TDD5 553 aa1.66□□□□□ -2.14
GYPB-207ENST00000506679 MAIP1Q8WWC4 291 aa1.66□□□□□ -2.14
GYPB-207ENST00000506679 SLC38A2Q96QD8 506 aa1.66□□□□□ -2.14
GYPB-207ENST00000506679 CLCC1Q96S66 551 aa1.66□□□□□ -2.14
GYPB-207ENST00000506679 HDHD3Q9BSH5 251 aaPredicted RBP1.66□□□□□ -2.14
GYPB-207ENST00000506679 FAIM2Q9BWQ8 316 aa1.66□□□□□ -2.14
GYPB-207ENST00000506679 DNTTIP1Q9H147 329 aa1.66□□□□□ -2.14
GYPB-207ENST00000506679 CALYQ9NYX4 217 aa1.66□□□□□ -2.14
GYPB-207ENST00000506679 KCNIP1Q9NZI2 227 aa1.66□□□□□ -2.14
GYPB-207ENST00000506679 ISY1Q9ULR0 285 aaKnown RBP1.66□□□□□ -2.14
GYPB-207ENST00000506679 PTCH1Q13635 1447 aa1.66□□□□□ -2.14
GYPB-207ENST00000506679 IGLV3-22A0A075B6J6 115 aa1.65□□□□□ -2.15
GYPB-207ENST00000506679 IGKV2-28A0A075B6P5 120 aa1.65□□□□□ -2.15
GYPB-207ENST00000506679 CCDC182A6NF36 153 aa1.65□□□□□ -2.15
GYPB-207ENST00000506679 OR5B21A6NL26 309 aa1.65□□□□□ -2.15
GYPB-207ENST00000506679 C11orf94C9JXX5 98 aa1.65□□□□□ -2.15
GYPB-207ENST00000506679 POLR2DO15514 142 aaKnown RBP1.65□□□□□ -2.15
GYPB-207ENST00000506679 DFNA5O60443 496 aa1.65□□□□□ -2.15
GYPB-207ENST00000506679 RHOBTB1O94844 696 aa1.65□□□□□ -2.15
GYPB-207ENST00000506679 IGKV2D-28P01615 120 aa1.65□□□□□ -2.15
GYPB-207ENST00000506679 PLEKP08567 350 aaPredicted RBP1.65□□□□□ -2.15
GYPB-207ENST00000506679 IGHV3-43DP0DP04 118 aa1.65□□□□□ -2.15
GYPB-207ENST00000506679 CCDC130P13994 396 aa1.65□□□□□ -2.15
GYPB-207ENST00000506679 LONP1P36776 959 aaKnown RBP1.65□□□□□ -2.15
GYPB-207ENST00000506679 SLC26A3P40879 764 aa1.65□□□□□ -2.15
GYPB-207ENST00000506679 CXCL5P42830 114 aa1.65□□□□□ -2.15
GYPB-207ENST00000506679 NPBWR2P48146 333 aa1.65□□□□□ -2.15
GYPB-207ENST00000506679 GSSP48637 474 aa1.65□□□□□ -2.15
GYPB-207ENST00000506679 MNAT1P51948 309 aa1.65□□□□□ -2.15
GYPB-207ENST00000506679 ZNF136P52737 540 aa1.65□□□□□ -2.15
GYPB-207ENST00000506679 KRTAP10-10P60014 251 aa1.65□□□□□ -2.15
GYPB-207ENST00000506679 CDK16Q00536 496 aa1.65□□□□□ -2.15
GYPB-207ENST00000506679 ENPEPQ07075 957 aa1.65□□□□□ -2.15
GYPB-207ENST00000506679 FZD2Q14332 565 aa1.65□□□□□ -2.15
GYPB-207ENST00000506679 PTGES3Q15185 160 aaKnown RBP1.65□□□□□ -2.15
GYPB-207ENST00000506679 TAF7Q15545 349 aaPredicted RBP1.65□□□□□ -2.15
GYPB-207ENST00000506679 DGUOKQ16854 277 aa1.65□□□□□ -2.15
GYPB-207ENST00000506679 TMEM183BQ1AE95 376 aa1.65□□□□□ -2.15
GYPB-207ENST00000506679 EXOC3L2Q2M3D2 409 aa1.65□□□□□ -2.15
GYPB-207ENST00000506679 KLHL38Q2WGJ6 581 aa1.65□□□□□ -2.15
GYPB-207ENST00000506679 CCDC152Q4G0S7 254 aa1.65□□□□□ -2.15
GYPB-207ENST00000506679 DMRTC1Q5HYR2 192 aa1.65□□□□□ -2.15
GYPB-207ENST00000506679 PDZK1Q5T2W1 519 aa1.65□□□□□ -2.15
GYPB-207ENST00000506679 LCE1CQ5T751 118 aa1.65□□□□□ -2.15
GYPB-207ENST00000506679 LCE1BQ5T7P3 118 aa1.65□□□□□ -2.15
GYPB-207ENST00000506679 ATAD3BQ5T9A4 648 aa1.65□□□□□ -2.15
GYPB-207ENST00000506679 DHDDSQ86SQ9 333 aa1.65□□□□□ -2.15
GYPB-207ENST00000506679 CCDC65Q8IXS2 484 aa1.65□□□□□ -2.15
GYPB-207ENST00000506679 TMEM183AQ8IXX5 376 aa1.65□□□□□ -2.15
GYPB-207ENST00000506679 Q8N976 141 aa1.65□□□□□ -2.15
GYPB-207ENST00000506679 OR52M1Q8NGK5 317 aa1.65□□□□□ -2.15
GYPB-207ENST00000506679 OR1N2Q8NGR9 330 aa1.65□□□□□ -2.15
GYPB-207ENST00000506679 OR2G3Q8NGZ4 309 aa1.65□□□□□ -2.15
GYPB-207ENST00000506679 STARD8Q92502 1023 aa1.65□□□□□ -2.15
GYPB-207ENST00000506679 CEP170P1Q96L14 293 aa1.65□□□□□ -2.15
GYPB-207ENST00000506679 TSNARE1Q96NA8 513 aa1.65□□□□□ -2.15
GYPB-207ENST00000506679 FOPNLQ96NB1 174 aa1.65□□□□□ -2.15
GYPB-207ENST00000506679 TTC25Q96NG3 672 aa1.65□□□□□ -2.15
GYPB-207ENST00000506679 TAAR1Q96RJ0 339 aa1.65□□□□□ -2.15
GYPB-207ENST00000506679 SCRT1Q9BWW7 348 aa1.65□□□□□ -2.15
GYPB-207ENST00000506679 PLA2G2FQ9BZM2 168 aa1.65□□□□□ -2.15
GYPB-207ENST00000506679 GBA3Q9H227 469 aa1.65□□□□□ -2.15
GYPB-207ENST00000506679 SPATA7Q9P0W8 599 aa1.65□□□□□ -2.15
GYPB-207ENST00000506679 DEC1Q9P2X7 70 aa1.65□□□□□ -2.15
GYPB-207ENST00000506679 TMCO1Q9UM00 188 aa1.65□□□□□ -2.15
GYPB-207ENST00000506679 SNX6Q9UNH7 406 aa1.65□□□□□ -2.15
GYPB-207ENST00000506679 KCNIP3Q9Y2W7 256 aa1.65□□□□□ -2.15
GYPB-207ENST00000506679 CARMIL3Q8ND23 1372 aa1.64□□□□□ -2.15
GYPB-207ENST00000506679 IGLV11-55A0A075B6I3 123 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms