RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 CIB4A0PJX0 185 aa11.56□□□□□ -0.56
TCOF1-209ENST00000506630 FZD7O75084 574 aa11.56□□□□□ -0.56
TCOF1-209ENST00000506630 RAD51DO75771 328 aa11.56□□□□□ -0.56
TCOF1-209ENST00000506630 CH25HO95992 272 aa11.56□□□□□ -0.56
TCOF1-209ENST00000506630 HRGP04196 525 aa11.56□□□□□ -0.56
TCOF1-209ENST00000506630 IFNW1P05000 195 aa11.56□□□□□ -0.56
TCOF1-209ENST00000506630 THBDP07204 575 aa11.56□□□□□ -0.56
TCOF1-209ENST00000506630 UMPSP11172 480 aa11.56□□□□□ -0.56
TCOF1-209ENST00000506630 IFNA8P32881 189 aa11.56□□□□□ -0.56
TCOF1-209ENST00000506630 YAP1P46937 504 aaKnown RBP11.56□□□□□ -0.56
TCOF1-209ENST00000506630 SELENOPP49908 381 aa11.56□□□□□ -0.56
TCOF1-209ENST00000506630 MNAT1P51948 309 aa11.56□□□□□ -0.56
TCOF1-209ENST00000506630 CLDN17P56750 224 aa11.56□□□□□ -0.56
TCOF1-209ENST00000506630 C1DQ13901 141 aaKnown RBP11.56□□□□□ -0.56
TCOF1-209ENST00000506630 SAMD4BQ5PRF9 694 aaKnown RBP11.56□□□□□ -0.56
TCOF1-209ENST00000506630 TSPO2Q5TGU0 170 aa11.56□□□□□ -0.56
TCOF1-209ENST00000506630 CREB3L2Q70SY1 520 aa11.56□□□□□ -0.56
TCOF1-209ENST00000506630 H1FNTQ75WM6 255 aaPredicted RBP11.56□□□□□ -0.56
TCOF1-209ENST00000506630 EPHX4Q8IUS5 362 aa11.56□□□□□ -0.56
TCOF1-209ENST00000506630 NKAIN4Q8IVV8 208 aa11.56□□□□□ -0.56
TCOF1-209ENST00000506630 RBM15BQ8NDT2 890 aaKnown RBP11.56□□□□□ -0.56
TCOF1-209ENST00000506630 ADPRHL1Q8NDY3 354 aa11.56□□□□□ -0.56
TCOF1-209ENST00000506630 PFN4Q8NHR9 129 aa11.56□□□□□ -0.56
TCOF1-209ENST00000506630 SPATA3Q8NHX4 192 aa11.56□□□□□ -0.56
TCOF1-209ENST00000506630 BCAS4Q8TDM0 211 aa11.56□□□□□ -0.56
TCOF1-209ENST00000506630 NSL1Q96IY1 281 aa11.56□□□□□ -0.56
TCOF1-209ENST00000506630 OXGR1Q96P68 337 aa11.56□□□□□ -0.56
TCOF1-209ENST00000506630 CDRT15Q96T59 188 aa11.56□□□□□ -0.56
TCOF1-209ENST00000506630 PRSS27Q9BQR3 290 aa11.56□□□□□ -0.56
TCOF1-209ENST00000506630 SLCO5A1Q9H2Y9 848 aa11.56□□□□□ -0.56
TCOF1-209ENST00000506630 MALT1Q9UDY8 824 aa11.56□□□□□ -0.56
TCOF1-209ENST00000506630 ROS1P08922 2347 aa11.55□□□□□ -0.56
TCOF1-209ENST00000506630 JMJD1CQ15652 2540 aa11.55□□□□□ -0.56
TCOF1-209ENST00000506630 DEFB108AA8MXU0 73 aa11.55□□□□□ -0.56
TCOF1-209ENST00000506630 B2RBV5 119 aa11.55□□□□□ -0.56
TCOF1-209ENST00000506630 J3KTA2 159 aa11.55□□□□□ -0.56
TCOF1-209ENST00000506630 SIAH2O43255 324 aa11.55□□□□□ -0.56
TCOF1-209ENST00000506630 AKAP8O43823 692 aaKnown RBP11.55□□□□□ -0.56
TCOF1-209ENST00000506630 KRT33AO76009 404 aa11.55□□□□□ -0.56
TCOF1-209ENST00000506630 MT-ATP6P00846 226 aa11.55□□□□□ -0.56
TCOF1-209ENST00000506630 CD53P19397 219 aa11.55□□□□□ -0.56
TCOF1-209ENST00000506630 CALB2P22676 271 aa11.55□□□□□ -0.56
TCOF1-209ENST00000506630 PCSK6P29122 969 aa11.55□□□□□ -0.56
TCOF1-209ENST00000506630 UGT2B15P54855 530 aa11.55□□□□□ -0.56
TCOF1-209ENST00000506630 PMS2P3Q13401 168 aa11.55□□□□□ -0.56
TCOF1-209ENST00000506630 ZNF74Q16587 644 aa11.55□□□□□ -0.56
TCOF1-209ENST00000506630 C9orf135Q5VTT2 229 aa11.55□□□□□ -0.56
TCOF1-209ENST00000506630 UEVLDQ8IX04 471 aa11.55□□□□□ -0.56
TCOF1-209ENST00000506630 ZNF433Q8N7K0 673 aaPredicted RBP11.55□□□□□ -0.56
TCOF1-209ENST00000506630 ZIC4Q8N9L1 334 aa11.55□□□□□ -0.56
TCOF1-209ENST00000506630 SCAIQ8N9R8 606 aa11.55□□□□□ -0.56
TCOF1-209ENST00000506630 POMGNT2Q8NAT1 580 aa11.55□□□□□ -0.56
TCOF1-209ENST00000506630 OR5J2Q8NH18 312 aa11.55□□□□□ -0.56
TCOF1-209ENST00000506630 TMEM255BQ8WV15 326 aa11.55□□□□□ -0.56
TCOF1-209ENST00000506630 TMEM239Q8WW34 195 aa11.55□□□□□ -0.56
TCOF1-209ENST00000506630 ZNF426Q9BUY5 554 aa11.55□□□□□ -0.56
TCOF1-209ENST00000506630 SLC19A3Q9BZV2 496 aa11.55□□□□□ -0.56
TCOF1-209ENST00000506630 AMBRA1Q9C0C7 1298 aa11.55□□□□□ -0.56
TCOF1-209ENST00000506630 FKRPQ9H9S5 495 aa11.55□□□□□ -0.56
TCOF1-209ENST00000506630 NANSQ9NR45 359 aa11.55□□□□□ -0.56
TCOF1-209ENST00000506630 SLC7A10Q9NS82 523 aa11.55□□□□□ -0.56
TCOF1-209ENST00000506630 MRPL39Q9NYK5 338 aaKnown RBP11.55□□□□□ -0.56
TCOF1-209ENST00000506630 TAS2R16Q9NYV7 291 aa11.55□□□□□ -0.56
TCOF1-209ENST00000506630 B3GAT1Q9P2W7 334 aa11.55□□□□□ -0.56
TCOF1-209ENST00000506630 MAGEL2Q9UJ55 1249 aa11.55□□□□□ -0.56
TCOF1-209ENST00000506630 A4GNTQ9UNA3 340 aa11.55□□□□□ -0.56
TCOF1-209ENST00000506630 SAMD4AQ9UPU9 718 aaKnown RBP11.55□□□□□ -0.56
TCOF1-209ENST00000506630 V9GYQ6 96 aa11.55□□□□□ -0.56
TCOF1-209ENST00000506630 NSD1Q96L73 2696 aaPredicted RBP11.54□□□□□ -0.56
TCOF1-209ENST00000506630 C11orf98E9PRG8 122 aa11.54□□□□□ -0.56
TCOF1-209ENST00000506630 MS4A18H0YCH9 400 aa11.54□□□□□ -0.56
TCOF1-209ENST00000506630 SERPINI2O75830 405 aa11.54□□□□□ -0.56
TCOF1-209ENST00000506630 OR6A2O95222 327 aa11.54□□□□□ -0.56
TCOF1-209ENST00000506630 HPRP00739 348 aa11.54□□□□□ -0.56
TCOF1-209ENST00000506630 ITGA5P08648 1049 aa11.54□□□□□ -0.56
TCOF1-209ENST00000506630 ADORA3P0DMS8 318 aa11.54□□□□□ -0.56
TCOF1-209ENST00000506630 THRBP10828 461 aa11.54□□□□□ -0.56
TCOF1-209ENST00000506630 HSD17B1P14061 328 aa11.54□□□□□ -0.56
TCOF1-209ENST00000506630 AHCYP23526 432 aa11.54□□□□□ -0.56
TCOF1-209ENST00000506630 RBM34P42696 430 aaKnown RBP11.54□□□□□ -0.56
TCOF1-209ENST00000506630 FOXG1P55316 489 aaPredicted RBP11.54□□□□□ -0.56
TCOF1-209ENST00000506630 PPP2R2BQ00005 443 aa11.54□□□□□ -0.56
TCOF1-209ENST00000506630 POU3F1Q03052 451 aaPredicted RBP11.54□□□□□ -0.56
TCOF1-209ENST00000506630 LGALS3BPQ08380 585 aa11.54□□□□□ -0.56
TCOF1-209ENST00000506630 PUDPQ08623 228 aa11.54□□□□□ -0.56
TCOF1-209ENST00000506630 ST3GAL3Q11203 375 aa11.54□□□□□ -0.56
TCOF1-209ENST00000506630 TAB1Q15750 504 aa11.54□□□□□ -0.56
TCOF1-209ENST00000506630 MS4A18Q3C1V0 323 aa11.54□□□□□ -0.56
TCOF1-209ENST00000506630 BEX5Q5H9J7 111 aa11.54□□□□□ -0.56
TCOF1-209ENST00000506630 CXXC5Q7LFL8 322 aaKnown RBP11.54□□□□□ -0.56
TCOF1-209ENST00000506630 ABHD12BQ7Z5M8 362 aaPredicted RBP11.54□□□□□ -0.56
TCOF1-209ENST00000506630 KRTAP1-3Q8IUG1 177 aa11.54□□□□□ -0.56
TCOF1-209ENST00000506630 COX4I2Q96KJ9 171 aa11.54□□□□□ -0.56
TCOF1-209ENST00000506630 ALKBH3Q96Q83 286 aaPredicted RBP11.54□□□□□ -0.56
TCOF1-209ENST00000506630 FNDC11Q9BVV2 318 aa11.54□□□□□ -0.56
TCOF1-209ENST00000506630 RHCGQ9UBD6 479 aa11.54□□□□□ -0.56
TCOF1-209ENST00000506630 SNX13Q9Y5W8 968 aa11.54□□□□□ -0.56
TCOF1-209ENST00000506630 FN1P02751 2386 aaKnown RBP11.54□□□□□ -0.56
TCOF1-209ENST00000506630 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.53□□□□□ -0.56
TCOF1-209ENST00000506630 OR6C65A6NJZ3 312 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms