RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 KLK3P07288 261 aaPredicted RBP11.02□□□□□ -0.64
LIN54-206ENST00000506560 AVPR2P30518 371 aa11.02□□□□□ -0.64
LIN54-206ENST00000506560 LCN1P31025 176 aa11.02□□□□□ -0.64
LIN54-206ENST00000506560 SDHAP31040 664 aa11.02□□□□□ -0.64
LIN54-206ENST00000506560 POLR2HP52434 150 aaKnown RBP11.02□□□□□ -0.64
LIN54-206ENST00000506560 KRR1Q13601 381 aaKnown RBP11.02□□□□□ -0.64
LIN54-206ENST00000506560 MELKQ14680 651 aa11.02□□□□□ -0.64
LIN54-206ENST00000506560 OXA1LQ15070 435 aa11.02□□□□□ -0.64
LIN54-206ENST00000506560 ETFDHQ16134 617 aa11.02□□□□□ -0.64
LIN54-206ENST00000506560 C1orf140Q5VVS0 124 aa11.02□□□□□ -0.64
LIN54-206ENST00000506560 STEAP3Q658P3 488 aa11.02□□□□□ -0.64
LIN54-206ENST00000506560 LINC00299Q6ZSB3 139 aa11.02□□□□□ -0.64
LIN54-206ENST00000506560 JAZF1Q86VZ6 243 aa11.02□□□□□ -0.64
LIN54-206ENST00000506560 PM20D2Q8IYS1 436 aa11.02□□□□□ -0.64
LIN54-206ENST00000506560 NEIL3Q8TAT5 605 aa11.02□□□□□ -0.64
LIN54-206ENST00000506560 ZNF417Q8TAU3 575 aa11.02□□□□□ -0.64
LIN54-206ENST00000506560 OIT3Q8WWZ8 545 aa11.02□□□□□ -0.64
LIN54-206ENST00000506560 ZNF587Q96SQ5 575 aaPredicted RBP11.02□□□□□ -0.64
LIN54-206ENST00000506560 A3GALT2U3KPV4 340 aa11.02□□□□□ -0.64
LIN54-206ENST00000506560 OTOGLQ3ZCN5 2332 aa11.02□□□□□ -0.65
LIN54-206ENST00000506560 G3V3Y1 287 aa11.02□□□□□ -0.65
LIN54-206ENST00000506560 CDX4O14627 284 aaPredicted RBP11.02□□□□□ -0.65
LIN54-206ENST00000506560 ARHGEF9O43307 516 aa11.02□□□□□ -0.65
LIN54-206ENST00000506560 ZFAND5O76080 213 aa11.02□□□□□ -0.65
LIN54-206ENST00000506560 SNX4O95219 450 aa11.02□□□□□ -0.65
LIN54-206ENST00000506560 SHC1P29353 583 aa11.02□□□□□ -0.65
LIN54-206ENST00000506560 GRINAQ7Z429 371 aa11.02□□□□□ -0.65
LIN54-206ENST00000506560 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.02□□□□□ -0.65
LIN54-206ENST00000506560 HSD17B8Q92506 261 aa11.02□□□□□ -0.65
LIN54-206ENST00000506560 PDCD1LG2Q9BQ51 273 aa11.02□□□□□ -0.65
LIN54-206ENST00000506560 DEFB126Q9BYW3 111 aa11.02□□□□□ -0.65
LIN54-206ENST00000506560 RNF32Q9H0A6 362 aa11.02□□□□□ -0.65
LIN54-206ENST00000506560 WDR76Q9H967 626 aa11.02□□□□□ -0.65
LIN54-206ENST00000506560 FKRPQ9H9S5 495 aa11.02□□□□□ -0.65
LIN54-206ENST00000506560 TRIM36Q9NQ86 728 aa11.02□□□□□ -0.65
LIN54-206ENST00000506560 GRHPRQ9UBQ7 328 aa11.02□□□□□ -0.65
LIN54-206ENST00000506560 ZNF229Q9UJW7 825 aa11.02□□□□□ -0.65
LIN54-206ENST00000506560 DOCK10Q96BY6 2186 aa11.02□□□□□ -0.65
LIN54-206ENST00000506560 RTTNQ86VV8 2226 aa11.02□□□□□ -0.65
LIN54-206ENST00000506560 IGHV1-45A0A0A0MS14 117 aa11.01□□□□□ -0.65
LIN54-206ENST00000506560 CASKO14936 926 aa11.01□□□□□ -0.65
LIN54-206ENST00000506560 SSX4O60224 188 aa11.01□□□□□ -0.65
LIN54-206ENST00000506560 URB1O60287 2271 aaKnown RBP11.01□□□□□ -0.65
LIN54-206ENST00000506560 ITGA10O75578 1167 aa11.01□□□□□ -0.65
LIN54-206ENST00000506560 IL1AP01583 271 aa11.01□□□□□ -0.65
LIN54-206ENST00000506560 MT-ND5P03915 603 aa11.01□□□□□ -0.65
LIN54-206ENST00000506560 COX6A1P12074 109 aa11.01□□□□□ -0.65
LIN54-206ENST00000506560 ACP1P24666 158 aa11.01□□□□□ -0.65
LIN54-206ENST00000506560 FGF9P31371 208 aaPredicted RBP11.01□□□□□ -0.65
LIN54-206ENST00000506560 GLYR1Q49A26 553 aaPredicted RBP11.01□□□□□ -0.65
LIN54-206ENST00000506560 DBX2Q6ZNG2 339 aa11.01□□□□□ -0.65
LIN54-206ENST00000506560 TIPARPQ7Z3E1 657 aaKnown RBP11.01□□□□□ -0.65
LIN54-206ENST00000506560 LYSMD2Q8IV50 215 aa11.01□□□□□ -0.65
LIN54-206ENST00000506560 ELP5Q8TE02 316 aa11.01□□□□□ -0.65
LIN54-206ENST00000506560 PCSK5Q92824 1860 aa11.01□□□□□ -0.65
LIN54-206ENST00000506560 TMCO6Q96DC7 493 aa11.01□□□□□ -0.65
LIN54-206ENST00000506560 CCNL2Q96S94 520 aaPredicted RBP11.01□□□□□ -0.65
LIN54-206ENST00000506560 MROQ9BYG7 248 aa11.01□□□□□ -0.65
LIN54-206ENST00000506560 NCDNQ9UBB6 729 aa11.01□□□□□ -0.65
LIN54-206ENST00000506560 GPN3Q9UHW5 284 aaPredicted RBP11.01□□□□□ -0.65
LIN54-206ENST00000506560 ST6GALNAC2Q9UJ37 374 aa11.01□□□□□ -0.65
LIN54-206ENST00000506560 GNG8Q9UK08 70 aa11.01□□□□□ -0.65
LIN54-206ENST00000506560 PEX16Q9Y5Y5 336 aa11.01□□□□□ -0.65
LIN54-206ENST00000506560 A0A075B6Q4 140 aa11.01□□□□□ -0.65
LIN54-206ENST00000506560 A0A1B0GTH9 108 aa11.01□□□□□ -0.65
LIN54-206ENST00000506560 DKK1O94907 266 aa11.01□□□□□ -0.65
LIN54-206ENST00000506560 HLA-DPB1P04440 258 aa11.01□□□□□ -0.65
LIN54-206ENST00000506560 HIST1H2ABP04908 130 aa11.01□□□□□ -0.65
LIN54-206ENST00000506560 OR10A3P58181 314 aa11.01□□□□□ -0.65
LIN54-206ENST00000506560 PSPHP78330 225 aa11.01□□□□□ -0.65
LIN54-206ENST00000506560 GGTLC2Q14390 218 aa11.01□□□□□ -0.65
LIN54-206ENST00000506560 ACKR1Q16570 336 aa11.01□□□□□ -0.65
LIN54-206ENST00000506560 ARMC4Q5T2S8 1044 aa11.01□□□□□ -0.65
LIN54-206ENST00000506560 FAM69AQ5T7M9 428 aa11.01□□□□□ -0.65
LIN54-206ENST00000506560 IL20RBQ6UXL0 311 aa11.01□□□□□ -0.65
LIN54-206ENST00000506560 ZNF517Q6ZMY9 492 aaPredicted RBP11.01□□□□□ -0.65
LIN54-206ENST00000506560 HIST3H2AQ7L7L0 130 aa11.01□□□□□ -0.65
LIN54-206ENST00000506560 SLC22A16Q86VW1 577 aa11.01□□□□□ -0.65
LIN54-206ENST00000506560 GHSRQ92847 366 aa11.01□□□□□ -0.65
LIN54-206ENST00000506560 HIST1H2ACQ93077 130 aa11.01□□□□□ -0.65
LIN54-206ENST00000506560 RNF166Q96A37 237 aaPredicted RBP11.01□□□□□ -0.65
LIN54-206ENST00000506560 C12orf10Q9HB07 376 aa11.01□□□□□ -0.65
LIN54-206ENST00000506560 PCDHGB6Q9Y5F9 930 aa11.01□□□□□ -0.65
LIN54-206ENST00000506560 V9GYH0 126 aa11.01□□□□□ -0.65
LIN54-206ENST00000506560 A8MVM7 634 aa11□□□□□ -0.65
LIN54-206ENST00000506560 H3BSH0 61 aa11□□□□□ -0.65
LIN54-206ENST00000506560 UPK1BO75841 260 aa11□□□□□ -0.65
LIN54-206ENST00000506560 GLCEO94923 617 aa11□□□□□ -0.65
LIN54-206ENST00000506560 AKR7A3O95154 331 aa11□□□□□ -0.65
LIN54-206ENST00000506560 CD59P13987 128 aa11□□□□□ -0.65
LIN54-206ENST00000506560 C17orf67Q0P5P2 114 aa11□□□□□ -0.65
LIN54-206ENST00000506560 TRA2AQ13595 282 aaKnown RBP eCLIP11□□□□□ -0.65
LIN54-206ENST00000506560 EFR3AQ14156 821 aa11□□□□□ -0.65
LIN54-206ENST00000506560 ZNF79Q15937 498 aa11□□□□□ -0.65
LIN54-206ENST00000506560 SLC43A2Q8N370 569 aa11□□□□□ -0.65
LIN54-206ENST00000506560 OR11G2Q8NGC1 345 aa11□□□□□ -0.65
LIN54-206ENST00000506560 SLC39A7Q92504 469 aa11□□□□□ -0.65
LIN54-206ENST00000506560 AMELYQ99218 206 aa11□□□□□ -0.65
LIN54-206ENST00000506560 TSPAN10Q9H1Z9 355 aaPredicted RBP11□□□□□ -0.65
LIN54-206ENST00000506560 METTL7AQ9H8H3 244 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms