RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 ZP1P60852 638 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 TSPAN5P62079 268 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 GTF2H2Q13888 395 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 DGCR6Q14129 220 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 CYTH1Q15438 398 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 PSG3Q16557 428 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 EXOC3L4Q17RC7 722 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 PRTGQ2VWP7 1150 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 MTX3Q5HYI7 312 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 MARCH8Q5T0T0 291 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 GTF2H2CQ6P1K8 395 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 FAM171BQ6P995 826 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 CXCL17Q6UXB2 119 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 LRRC31Q6UY01 552 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 HACD2Q6Y1H2 254 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 ASB18Q6ZVZ8 466 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 SLC16A14Q7RTX9 510 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 PAGE2Q7Z2X7 111 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 CCDC50Q8IVM0 306 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 ZBTB8OSQ8IWT0 167 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 ZNF100Q8IYN0 542 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 Q8N1X5 172 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 ARFGAP1Q8N6T3 406 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 NANOGP1Q8N7R0 232 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 ICA1LQ8NDH6 482 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 DDB2Q92466 427 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 NR4A3Q92570 626 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 DLX4Q92988 240 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 DNAJC19Q96DA6 116 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 RTP4Q96DX8 246 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 NUS1Q96E22 293 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 SERAC1Q96JX3 654 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 CSPG4P5Q96PW8 444 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 CTRCQ99895 268 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 MAPKAP1Q9BPZ7 522 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 C7orf50Q9BRJ6 194 aaKnown RBP3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 ANGPTL4Q9BY76 406 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 GBA3Q9H227 469 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 PPA2Q9H2U2 334 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 WDR55Q9H6Y2 383 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 TMEM30AQ9NV96 361 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 TUBA8Q9NY65 449 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 MRPL39Q9NYK5 338 aaKnown RBP3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 STMN3Q9NZ72 180 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 ATPIF1Q9UII2 106 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 SLC7A7Q9UM01 511 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 PDE10AQ9Y233 779 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 PUS1Q9Y606 427 aaKnown RBP eCLIP3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 TET1Q8NFU7 2136 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 WDR87Q6ZQQ6 2873 aa3.73□□□□□ -1.81
HMGB1P21-201ENST00000502313 NPIPA5A0A0B4J1W7 369 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 IGHV4-28A0A0C4DH34 117 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 LOC101059948A0A1B0GTJ6 334 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 A0A1W2PQ72 361 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 RPS10-NUDT3A0A1W2PQS6 291 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 NPIPA5E9PKD4 350 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 LMO7DNF2Z398 122 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 M0R3G1 203 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 DYNC1I1O14576 645 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 ZNF195O14628 629 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 B4GALT5O43286 388 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 SLC37A4O43826 429 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 KLRC4O43908 158 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 SOX30O94993 753 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 CCNB2O95067 398 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 CCNE2O96020 404 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 OAS1P00973 400 aaKnown RBP3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 LINC00271P0C7V0 271 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 IGHV4-31P0DP07 118 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 HOXA9P31269 272 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 CCKBRP32239 447 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 MRPL19P49406 292 aaKnown RBP3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 PGFP49763 221 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 RASSF2P50749 326 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 PKNOX1P55347 436 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 XGP55808 180 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 TMEM50BP56557 158 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 MLF1P58340 268 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 DSTNP60981 165 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 RAB10P61026 200 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 UBE2MP61081 183 aaKnown RBP3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 KCNJ2P63252 427 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 IRX1P78414 480 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 GTF2BQ00403 316 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 RGS1Q08116 209 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 SRSF4Q08170 494 aaKnown RBP3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 GPS2Q13227 327 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 DAZAP2Q15038 168 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 SHHQ15465 462 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 TSC22D1Q15714 1073 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 VAMP3Q15836 100 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 ZNF77Q15935 545 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 SLC5A12Q1EHB4 618 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 KLHL38Q2WGJ6 581 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 XKR6Q5GH73 641 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 XKR4Q5GH76 650 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 FGD3Q5JSP0 725 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 SAPCD1Q5SSQ6 148 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 FNBP1LQ5T0N5 605 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms