RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 FAM109BQ6ICB4 259 aaPredicted RBP8.17□□□□□ -1.1
FN1-227ENST00000498719 BHLHB9Q6PI77 547 aa8.17□□□□□ -1.1
FN1-227ENST00000498719 QSOX2Q6ZRP7 698 aa8.17□□□□□ -1.1
FN1-227ENST00000498719 CENPVQ7Z7K6 275 aaPredicted RBP8.17□□□□□ -1.1
FN1-227ENST00000498719 RAB43Q86YS6 212 aa8.17□□□□□ -1.1
FN1-227ENST00000498719 CLDN22Q8N7P3 220 aa8.17□□□□□ -1.1
FN1-227ENST00000498719 ZNF485Q8NCK3 441 aa8.17□□□□□ -1.1
FN1-227ENST00000498719 TTLQ8NG68 377 aa8.17□□□□□ -1.1
FN1-227ENST00000498719 OR56A1Q8NGH5 318 aa8.17□□□□□ -1.1
FN1-227ENST00000498719 SFXN5Q8TD22 340 aa8.17□□□□□ -1.1
FN1-227ENST00000498719 GNPDA2Q8TDQ7 276 aa8.17□□□□□ -1.1
FN1-227ENST00000498719 UFD1Q92890 307 aa8.17□□□□□ -1.1
FN1-227ENST00000498719 CDS1Q92903 461 aa8.17□□□□□ -1.1
FN1-227ENST00000498719 FAM71F1Q96KD3 344 aaPredicted RBP8.17□□□□□ -1.1
FN1-227ENST00000498719 FGF20Q9NP95 211 aaPredicted RBP8.17□□□□□ -1.1
FN1-227ENST00000498719 PHPT1Q9NRX4 125 aaPredicted RBP8.17□□□□□ -1.1
FN1-227ENST00000498719 AP5S1Q9NUS5 200 aa8.17□□□□□ -1.1
FN1-227ENST00000498719 FANCMQ8IYD8 2048 aa8.16□□□□□ -1.1
FN1-227ENST00000498719 CASKO14936 926 aa8.16□□□□□ -1.1
FN1-227ENST00000498719 SURF4O15260 269 aa8.16□□□□□ -1.1
FN1-227ENST00000498719 PLA2G10O15496 165 aa8.16□□□□□ -1.1
FN1-227ENST00000498719 HPGDSO60760 199 aa8.16□□□□□ -1.1
FN1-227ENST00000498719 ZNF888P0CJ79 500 aaPredicted RBP8.16□□□□□ -1.1
FN1-227ENST00000498719 AK4P27144 223 aaPredicted RBP8.16□□□□□ -1.1
FN1-227ENST00000498719 NTSR1P30989 418 aa8.16□□□□□ -1.1
FN1-227ENST00000498719 ID2Q02363 134 aa8.16□□□□□ -1.1
FN1-227ENST00000498719 ST3GAL3Q11203 375 aa8.16□□□□□ -1.1
FN1-227ENST00000498719 ZNF155Q12901 538 aaPredicted RBP8.16□□□□□ -1.1
FN1-227ENST00000498719 TPBGQ13641 420 aa8.16□□□□□ -1.1
FN1-227ENST00000498719 RPE65Q16518 533 aa8.16□□□□□ -1.1
FN1-227ENST00000498719 TBRG1Q3YBR2 411 aa8.16□□□□□ -1.1
FN1-227ENST00000498719 NKAIN1Q4KMZ8 207 aa8.16□□□□□ -1.1
FN1-227ENST00000498719 PDZK1Q5T2W1 519 aa8.16□□□□□ -1.1
FN1-227ENST00000498719 HSDL2Q6YN16 418 aa8.16□□□□□ -1.1
FN1-227ENST00000498719 RASSF6Q6ZTQ3 369 aa8.16□□□□□ -1.1
FN1-227ENST00000498719 GDF7Q7Z4P5 450 aa8.16□□□□□ -1.1
FN1-227ENST00000498719 VN1R4Q7Z5H5 301 aa8.16□□□□□ -1.1
FN1-227ENST00000498719 MRGPREQ86SM8 312 aa8.16□□□□□ -1.1
FN1-227ENST00000498719 FJX1Q86VR8 437 aa8.16□□□□□ -1.1
FN1-227ENST00000498719 TRIM48Q8IWZ4 208 aa8.16□□□□□ -1.1
FN1-227ENST00000498719 TMEFF1Q8IYR6 380 aa8.16□□□□□ -1.1
FN1-227ENST00000498719 LINC00471Q8N535 108 aa8.16□□□□□ -1.1
FN1-227ENST00000498719 FAM110DQ8TAY7 271 aaPredicted RBP8.16□□□□□ -1.1
FN1-227ENST00000498719 TOE1Q96GM8 510 aaKnown RBP8.16□□□□□ -1.1
FN1-227ENST00000498719 SLC38A2Q96QD8 506 aa8.16□□□□□ -1.1
FN1-227ENST00000498719 FYTTD1Q96QD9 318 aaKnown RBP8.16□□□□□ -1.1
FN1-227ENST00000498719 MCHR1Q99705 422 aa8.16□□□□□ -1.1
FN1-227ENST00000498719 ARHGDIGQ99819 225 aa8.16□□□□□ -1.1
FN1-227ENST00000498719 TTYH2Q9BSA4 534 aa8.16□□□□□ -1.1
FN1-227ENST00000498719 SOX7Q9BT81 388 aa8.16□□□□□ -1.1
FN1-227ENST00000498719 BARX1Q9HBU1 254 aaPredicted RBP8.16□□□□□ -1.1
FN1-227ENST00000498719 FGF22Q9HCT0 170 aa8.16□□□□□ -1.1
FN1-227ENST00000498719 NDRG2Q9UN36 371 aaKnown RBP8.16□□□□□ -1.1
FN1-227ENST00000498719 CA5BQ9Y2D0 317 aa8.16□□□□□ -1.1
FN1-227ENST00000498719 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.15□□□□□ -1.1
FN1-227ENST00000498719 CD8B2A6NJW9 211 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 TM4SF5O14894 197 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 POLR1CO15160 346 aaPredicted RBP8.15□□□□□ -1.1
FN1-227ENST00000498719 IDH3BO43837 385 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 RLN1P04808 185 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 CD8BP10966 210 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 GABRA5P31644 462 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 AHRP35869 848 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 KIR2DL3P43628 341 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 STXBP1P61764 594 aaKnown RBP8.15□□□□□ -1.1
FN1-227ENST00000498719 SLAQ13239 276 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 FZD5Q13467 585 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 PHYHD1Q5SRE7 291 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 XKRXQ6PP77 449 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 CLEC9AQ6UXN8 241 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 FRRS1Q6ZNA5 592 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 RD3Q7Z3Z2 195 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 SIRT6Q8N6T7 355 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 Q8NA96 180 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 CCL4L1Q8NHW4 92 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 PIGXQ8TBF5 258 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 TBX5Q99593 518 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 SSX3Q99909 188 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 KXD1Q9BQD3 176 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 ZNF649Q9BS31 505 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 ENKD1Q9H0I2 346 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 MED20Q9H944 212 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 ISG20L2Q9H9L3 353 aaKnown RBP8.15□□□□□ -1.1
FN1-227ENST00000498719 MMP25Q9NPA2 562 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 PLSCR3Q9NRY6 295 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 KCNN3Q9UGI6 736 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 NUFIP1Q9UHK0 495 aaKnown RBP8.15□□□□□ -1.1
FN1-227ENST00000498719 SLC7A7Q9UM01 511 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 ZNF780BQ9Y6R6 833 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 NPIPA5A0A0B4J1W7 369 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 ZNF860A6NHJ4 632 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 B4DXG7 233 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 NPIPA7E9PJI5 369 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 KCNAB3O43448 404 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 GKN3PP0CG01 181 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 NPIPA8P0DM63 369 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 CD1BP29016 333 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 ANXA11P50995 505 aaKnown RBP8.15□□□□□ -1.1
FN1-227ENST00000498719 SIM1P81133 766 aaPredicted RBP8.15□□□□□ -1.1
FN1-227ENST00000498719 LBHQ53QV2 105 aaPredicted RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms