RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 ZNF716A6NP11 495 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 ZNF724A8MTY0 619 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 B2RBV5 119 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 HNRNPCL2B2RXH8 293 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 ATP6V1G2-DDX39BF2Z307 99 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 KIF2AO00139 706 aaPredicted RBP4.8□□□□□ -1.64
SPTA1-209ENST00000498708 POLR3GO15318 223 aaPredicted RBP4.8□□□□□ -1.64
SPTA1-209ENST00000498708 EIF4E2O60573 245 aaKnown RBP4.8□□□□□ -1.64
SPTA1-209ENST00000498708 HNRNPCL1O60812 293 aaKnown RBP4.8□□□□□ -1.64
SPTA1-209ENST00000498708 ATP6V1G1O75348 118 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 BCAS1O75363 584 aaPredicted RBP4.8□□□□□ -1.64
SPTA1-209ENST00000498708 MRPL33O75394 65 aaKnown RBP4.8□□□□□ -1.64
SPTA1-209ENST00000498708 UGT2B17O75795 530 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 PGM3O95394 542 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 HSPA4LO95757 839 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 CSTAP01040 98 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 PRB2P02812 416 aaPredicted RBP4.8□□□□□ -1.64
SPTA1-209ENST00000498708 ITGA5P08648 1049 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 IFI6P09912 130 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 ZNF23P17027 643 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 PGCP20142 388 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 COX5AP20674 150 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 LCN1P31025 176 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 ASMTP46597 345 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 CCT5P48643 541 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 EFNA4P52798 201 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 SUMO3P55854 103 aaPredicted RBP4.8□□□□□ -1.64
SPTA1-209ENST00000498708 BPIFB3P59826 476 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 DNAJB13P59910 316 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 RPL11P62913 178 aaKnown RBP4.8□□□□□ -1.64
SPTA1-209ENST00000498708 TUBA4AP68366 448 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 CSNK2A1P68400 391 aaPredicted RBP4.8□□□□□ -1.64
SPTA1-209ENST00000498708 CHRNB3Q05901 458 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 LRRC74AQ0VAA2 488 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 PCLAFQ15004 111 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 GABRA6Q16445 453 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 MAPK14Q16539 360 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 CCDC153Q494R4 210 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 SYT14P1Q58G82 188 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 IL23RQ5VWK5 629 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 KANK2Q63ZY3 851 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 ABLIM2Q6H8Q1 611 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 OR4F3Q6IEY1 312 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 TMPPEQ6ZT21 453 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 USP43Q70EL4 1123 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 TRMT10CQ7L0Y3 403 aaKnown RBP4.8□□□□□ -1.64
SPTA1-209ENST00000498708 C6orf120Q7Z4R8 191 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 CLECL1Q8IZS7 167 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 ZDHHC22Q8N966 263 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 WDR31Q8NA23 367 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 FNDC5Q8NAU1 212 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 OR5P2Q8WZ92 322 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 RAB8BQ92930 207 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 ARL8AQ96BM9 186 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 MTERF3Q96E29 417 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 SLC35G5Q96KT7 338 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 C3orf30Q96M34 536 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 SORCS2Q96PQ0 1159 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 INPP5KQ9BT40 448 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 DUSP26Q9BV47 211 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 MECRQ9BV79 373 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 C1QTNF5Q9BXJ0 243 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 LAT2Q9GZY6 243 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 OR51I1Q9H343 314 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 SERHL2Q9H4I8 314 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 HHATLQ9HCP6 504 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 ASB6Q9NWX5 421 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 ATP6V1HQ9UI12 483 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 MGAT4BQ9UQ53 548 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 TENM2Q9NT68 2774 aa4.8□□□□□ -1.64
SPTA1-209ENST00000498708 RNF103-CHMP3A0A140T963 221 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 TMEM72A0PK05 275 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 C9orf118A6NHY6 69 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 CLDN24A6NM45 220 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 TMEM114B3SHH9 223 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 NPIPB9F8W1W9 429 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 H3BQF6 201 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 AP3D1O14617 1153 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 PIN1P1O15428 100 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 SCN2BO60939 215 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 SPAG7O75391 227 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 ZNF254O75437 659 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 B3GALNT1O75752 331 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 C1QCP02747 245 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 S100A6P06703 90 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 KRT16P08779 473 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 CSF3P09919 207 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 OR12D1P0DN82 309 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 KRT4P19013 534 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 TNFRSF1AP19438 455 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 ALDH3A1P30838 453 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 APOBEC3AP31941 199 aaPredicted RBP4.79□□□□□ -1.64
SPTA1-209ENST00000498708 CRHR1P34998 444 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 RPL3P39023 403 aaKnown RBP4.79□□□□□ -1.64
SPTA1-209ENST00000498708 IDH2P48735 452 aaKnown RBP4.79□□□□□ -1.64
SPTA1-209ENST00000498708 PDLIM4P50479 330 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 UBA52P62987 128 aaKnown RBP4.79□□□□□ -1.64
SPTA1-209ENST00000498708 HBA1P69905 142 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 PHC1P78364 1004 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 ROR2Q01974 943 aaKnown RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms