RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 ZNF724A8MTY0 619 aa10.57□□□□□ -0.72
CUX1-210ENST00000497815 EEF1E1-BLOC1S5C9J1V9 151 aa10.57□□□□□ -0.72
CUX1-210ENST00000497815 G3V2T6 193 aa10.57□□□□□ -0.72
CUX1-210ENST00000497815 GPR171O14626 319 aa10.57□□□□□ -0.72
CUX1-210ENST00000497815 DVL2O14641 736 aa10.57□□□□□ -0.72
CUX1-210ENST00000497815 EEF1E1O43324 174 aaKnown RBP10.57□□□□□ -0.72
CUX1-210ENST00000497815 KLF4O43474 513 aa10.57□□□□□ -0.72
CUX1-210ENST00000497815 CRHP06850 196 aa10.57□□□□□ -0.72
CUX1-210ENST00000497815 FPR3P25089 353 aa10.57□□□□□ -0.72
CUX1-210ENST00000497815 CHRNB4P30926 498 aa10.57□□□□□ -0.72
CUX1-210ENST00000497815 UQCRC1P31930 480 aa10.57□□□□□ -0.72
CUX1-210ENST00000497815 OPRM1P35372 400 aa10.57□□□□□ -0.72
CUX1-210ENST00000497815 RPL4P36578 427 aaKnown RBP10.57□□□□□ -0.72
CUX1-210ENST00000497815 SLC9A3P48764 834 aa10.57□□□□□ -0.72
CUX1-210ENST00000497815 SLC16A1P53985 500 aa10.57□□□□□ -0.72
CUX1-210ENST00000497815 CLDN17P56750 224 aa10.57□□□□□ -0.72
CUX1-210ENST00000497815 RPS4XP62701 263 aaKnown RBP10.57□□□□□ -0.72
CUX1-210ENST00000497815 TSPAN31Q12999 210 aa10.57□□□□□ -0.72
CUX1-210ENST00000497815 TOP3AQ13472 1001 aaPredicted RBP10.57□□□□□ -0.72
CUX1-210ENST00000497815 GK3PQ14409 553 aa10.57□□□□□ -0.72
CUX1-210ENST00000497815 RCN1Q15293 331 aa10.57□□□□□ -0.72
CUX1-210ENST00000497815 GUSBP1Q15486 140 aa10.57□□□□□ -0.72
CUX1-210ENST00000497815 CDSNQ15517 529 aa10.57□□□□□ -0.72
CUX1-210ENST00000497815 ZBED5Q49AG3 693 aa10.57□□□□□ -0.72
CUX1-210ENST00000497815 ALG10Q5BKT4 473 aa10.57□□□□□ -0.72
CUX1-210ENST00000497815 CASP12Q6UXS9 341 aa10.57□□□□□ -0.72
CUX1-210ENST00000497815 CREB3L2Q70SY1 520 aa10.57□□□□□ -0.72
CUX1-210ENST00000497815 AAED1Q7RTV5 226 aa10.57□□□□□ -0.72
CUX1-210ENST00000497815 BTLAQ7Z6A9 289 aa10.57□□□□□ -0.72
CUX1-210ENST00000497815 GALNT5Q7Z7M9 940 aa10.57□□□□□ -0.72
CUX1-210ENST00000497815 STK32CQ86UX6 486 aa10.57□□□□□ -0.72
CUX1-210ENST00000497815 EPHX4Q8IUS5 362 aa10.57□□□□□ -0.72
CUX1-210ENST00000497815 PQLC1Q8N2U9 271 aa10.57□□□□□ -0.72
CUX1-210ENST00000497815 ZIC4Q8N9L1 334 aa10.57□□□□□ -0.72
CUX1-210ENST00000497815 ATG16L2Q8NAA4 619 aa10.57□□□□□ -0.72
CUX1-210ENST00000497815 OR5K1Q8NHB7 308 aa10.57□□□□□ -0.72
CUX1-210ENST00000497815 FANK1Q8TC84 345 aa10.57□□□□□ -0.72
CUX1-210ENST00000497815 CA5BP1Q8WTZ4 195 aa10.57□□□□□ -0.72
CUX1-210ENST00000497815 ASB5Q8WWX0 329 aa10.57□□□□□ -0.72
CUX1-210ENST00000497815 STARD4Q96DR4 205 aa10.57□□□□□ -0.72
CUX1-210ENST00000497815 CENPNQ96H22 339 aaPredicted RBP10.57□□□□□ -0.72
CUX1-210ENST00000497815 TXNDC15Q96J42 360 aa10.57□□□□□ -0.72
CUX1-210ENST00000497815 NIPSNAP1Q9BPW8 284 aa10.57□□□□□ -0.72
CUX1-210ENST00000497815 TACO1Q9BSH4 297 aaKnown RBP10.57□□□□□ -0.72
CUX1-210ENST00000497815 GP6Q9HCN6 339 aa10.57□□□□□ -0.72
CUX1-210ENST00000497815 INIPQ9NRY2 104 aa10.57□□□□□ -0.72
CUX1-210ENST00000497815 MED29Q9NX70 200 aa10.57□□□□□ -0.72
CUX1-210ENST00000497815 KIF17Q9P2E2 1029 aa10.57□□□□□ -0.72
CUX1-210ENST00000497815 OAZ3Q9UMX2 235 aa10.57□□□□□ -0.72
CUX1-210ENST00000497815 PROCRQ9UNN8 238 aa10.57□□□□□ -0.72
CUX1-210ENST00000497815 MGAT4BQ9UQ53 548 aa10.57□□□□□ -0.72
CUX1-210ENST00000497815 HIF3AQ9Y2N7 669 aa10.57□□□□□ -0.72
CUX1-210ENST00000497815 NOX1Q9Y5S8 564 aa10.57□□□□□ -0.72
CUX1-210ENST00000497815 GTF3C1Q12789 2109 aa10.57□□□□□ -0.72
CUX1-210ENST00000497815 MRPL33O75394 65 aaKnown RBP10.56□□□□□ -0.72
CUX1-210ENST00000497815 SOX14O95416 240 aa10.56□□□□□ -0.72
CUX1-210ENST00000497815 IGHV3-9P01782 118 aa10.56□□□□□ -0.72
CUX1-210ENST00000497815 RNF224P0DH78 156 aa10.56□□□□□ -0.72
CUX1-210ENST00000497815 IFNGR1P15260 489 aa10.56□□□□□ -0.72
CUX1-210ENST00000497815 ZNF26P17031 533 aaPredicted RBP10.56□□□□□ -0.72
CUX1-210ENST00000497815 EDNRAP25101 427 aa10.56□□□□□ -0.72
CUX1-210ENST00000497815 NTF4P34130 210 aa10.56□□□□□ -0.72
CUX1-210ENST00000497815 GSSP48637 474 aa10.56□□□□□ -0.72
CUX1-210ENST00000497815 SRSF1Q07955 248 aaKnown RBP eCLIP10.56□□□□□ -0.72
CUX1-210ENST00000497815 ZP4Q12836 540 aa10.56□□□□□ -0.72
CUX1-210ENST00000497815 FHL1Q13642 323 aa10.56□□□□□ -0.72
CUX1-210ENST00000497815 MELKQ14680 651 aa10.56□□□□□ -0.72
CUX1-210ENST00000497815 POU4F3Q15319 338 aa10.56□□□□□ -0.72
CUX1-210ENST00000497815 CARD17Q5XLA6 110 aa10.56□□□□□ -0.72
CUX1-210ENST00000497815 NIPAL3Q6P499 406 aa10.56□□□□□ -0.72
CUX1-210ENST00000497815 SLC35D2Q76EJ3 337 aa10.56□□□□□ -0.72
CUX1-210ENST00000497815 PXKQ7Z7A4 578 aa10.56□□□□□ -0.72
CUX1-210ENST00000497815 LUZP2Q86TE4 346 aa10.56□□□□□ -0.72
CUX1-210ENST00000497815 HIPK1Q86Z02 1210 aa10.56□□□□□ -0.72
CUX1-210ENST00000497815 ZDHHC13Q8IUH4 622 aa10.56□□□□□ -0.72
CUX1-210ENST00000497815 ZNF100Q8IYN0 542 aa10.56□□□□□ -0.72
CUX1-210ENST00000497815 RELL2Q8NC24 303 aaPredicted RBP10.56□□□□□ -0.72
CUX1-210ENST00000497815 ANKK1Q8NFD2 765 aa10.56□□□□□ -0.72
CUX1-210ENST00000497815 OR6K3Q8NGY3 331 aa10.56□□□□□ -0.72
CUX1-210ENST00000497815 ITLN2Q8WWU7 325 aaPredicted RBP10.56□□□□□ -0.72
CUX1-210ENST00000497815 EMC6Q9BV81 110 aa10.56□□□□□ -0.72
CUX1-210ENST00000497815 UCK2Q9BZX2 261 aa10.56□□□□□ -0.72
CUX1-210ENST00000497815 ENKD1Q9H0I2 346 aa10.56□□□□□ -0.72
CUX1-210ENST00000497815 OPN3Q9H1Y3 402 aaPredicted RBP10.56□□□□□ -0.72
CUX1-210ENST00000497815 EGLN3Q9H6Z9 239 aa10.56□□□□□ -0.72
CUX1-210ENST00000497815 ZNF556Q9HAH1 456 aa10.56□□□□□ -0.72
CUX1-210ENST00000497815 SMURF2Q9HAU4 748 aa10.56□□□□□ -0.72
CUX1-210ENST00000497815 ZNF629Q9UEG4 869 aaPredicted RBP10.56□□□□□ -0.72
CUX1-210ENST00000497815 SIGLEC7Q9Y286 467 aa10.56□□□□□ -0.72
CUX1-210ENST00000497815 LOC102725191A0A1B0GVB3 256 aa10.55□□□□□ -0.72
CUX1-210ENST00000497815 A0A1W2PRG6 482 aa10.55□□□□□ -0.72
CUX1-210ENST00000497815 NKX2-6A6NCS4 301 aa10.55□□□□□ -0.72
CUX1-210ENST00000497815 ARRDC5A6NEK1 342 aa10.55□□□□□ -0.72
CUX1-210ENST00000497815 MCIDASD6RGH6 385 aa10.55□□□□□ -0.72
CUX1-210ENST00000497815 PDLIM1O00151 329 aa10.55□□□□□ -0.72
CUX1-210ENST00000497815 TRAF3IP2O43734 574 aaPredicted RBP10.55□□□□□ -0.72
CUX1-210ENST00000497815 PTP4A3O75365 173 aa10.55□□□□□ -0.72
CUX1-210ENST00000497815 NDUFB2O95178 105 aa10.55□□□□□ -0.72
CUX1-210ENST00000497815 IL18BPO95998 194 aa10.55□□□□□ -0.72
CUX1-210ENST00000497815 ADAP00813 363 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms