RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 TIMD4Q96H15 378 aa8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 GAL3ST1Q99999 423 aa8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 CDIP1Q9H305 208 aa8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 ZNF385DQ9H6B1 395 aa8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 SEC61A2Q9H9S3 476 aa8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 EQTNQ9NQ60 294 aa8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 SERINC1Q9NRX5 453 aa8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 TMEM45AQ9NWC5 275 aa8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 ADPRHL2Q9NX46 363 aa8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 CRNNQ9UBG3 495 aaPredicted RBP8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 SEC14L4Q9UDX3 406 aa8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 PURGQ9UJV8 347 aaKnown RBP8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 NFU1Q9UMS0 254 aa8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 CHMP2BQ9UQN3 213 aa8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 ACTL7BQ9Y614 415 aa8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 WNK2Q9Y3S1 2297 aa8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 DNAH1Q9P2D7 4330 aa8.16□□□□□ -1.1
SMARCAL1-213ENST00000496037 SRRM5B3KS81 715 aa8.16□□□□□ -1.1
SMARCAL1-213ENST00000496037 CLDN25C9JDP6 229 aa8.16□□□□□ -1.1
SMARCAL1-213ENST00000496037 H3BNH8 94 aa8.16□□□□□ -1.1
SMARCAL1-213ENST00000496037 ACTL6BO94805 426 aa8.16□□□□□ -1.1
SMARCAL1-213ENST00000496037 MPIG6BO95866 241 aa8.16□□□□□ -1.1
SMARCAL1-213ENST00000496037 MT-ND5P03915 603 aa8.16□□□□□ -1.1
SMARCAL1-213ENST00000496037 MYZAPP0CAP1 466 aa8.16□□□□□ -1.1
SMARCAL1-213ENST00000496037 LCN1P31025 176 aa8.16□□□□□ -1.1
SMARCAL1-213ENST00000496037 CCR4P51679 360 aa8.16□□□□□ -1.1
SMARCAL1-213ENST00000496037 CCNG1P51959 295 aa8.16□□□□□ -1.1
SMARCAL1-213ENST00000496037 TUBA1BP68363 451 aa8.16□□□□□ -1.1
SMARCAL1-213ENST00000496037 TUBA4AP68366 448 aa8.16□□□□□ -1.1
SMARCAL1-213ENST00000496037 LRRC74AQ0VAA2 488 aa8.16□□□□□ -1.1
SMARCAL1-213ENST00000496037 TMED1Q13445 227 aa8.16□□□□□ -1.1
SMARCAL1-213ENST00000496037 GPR68Q15743 365 aa8.16□□□□□ -1.1
SMARCAL1-213ENST00000496037 TOMM34Q15785 309 aaPredicted RBP8.16□□□□□ -1.1
SMARCAL1-213ENST00000496037 SYT14P1Q58G82 188 aa8.16□□□□□ -1.1
SMARCAL1-213ENST00000496037 CBLN3Q6UW01 205 aa8.16□□□□□ -1.1
SMARCAL1-213ENST00000496037 TUBA1AQ71U36 451 aa8.16□□□□□ -1.1
SMARCAL1-213ENST00000496037 TMEM139Q8IV31 216 aa8.16□□□□□ -1.1
SMARCAL1-213ENST00000496037 IGDCC3Q8IVU1 814 aa8.16□□□□□ -1.1
SMARCAL1-213ENST00000496037 Q8N3U1 123 aa8.16□□□□□ -1.1
SMARCAL1-213ENST00000496037 C1orf52Q8N6N3 182 aaKnown RBP8.16□□□□□ -1.1
SMARCAL1-213ENST00000496037 OR1K1Q8NGR3 316 aa8.16□□□□□ -1.1
SMARCAL1-213ENST00000496037 OR6Y1Q8NGX8 325 aa8.16□□□□□ -1.1
SMARCAL1-213ENST00000496037 SLC25A43Q8WUT9 341 aaPredicted RBP8.16□□□□□ -1.1
SMARCAL1-213ENST00000496037 ZNF317Q96PQ6 595 aaPredicted RBP8.16□□□□□ -1.1
SMARCAL1-213ENST00000496037 ATOH8Q96SQ7 321 aa8.16□□□□□ -1.1
SMARCAL1-213ENST00000496037 SYT3Q9BQG1 590 aa8.16□□□□□ -1.1
SMARCAL1-213ENST00000496037 MRPL37Q9BZE1 423 aaKnown RBP8.16□□□□□ -1.1
SMARCAL1-213ENST00000496037 NMRK1Q9NWW6 199 aa8.16□□□□□ -1.1
SMARCAL1-213ENST00000496037 CARD8Q9Y2G2 431 aa8.16□□□□□ -1.1
SMARCAL1-213ENST00000496037 IGHV3OR16-10A0A075B7F0 116 aa8.15□□□□□ -1.1
SMARCAL1-213ENST00000496037 A0A096LPK6 155 aa8.15□□□□□ -1.1
SMARCAL1-213ENST00000496037 ARPC4-TTLL3A0A0A6YYG9 625 aa8.15□□□□□ -1.1
SMARCAL1-213ENST00000496037 IGHV2OR16-5A0A0B4J2B6 119 aa8.15□□□□□ -1.1
SMARCAL1-213ENST00000496037 MDFIC2A0A1B0GVS7 189 aa8.15□□□□□ -1.1
SMARCAL1-213ENST00000496037 GNG14A0A1W2PPG7 69 aa8.15□□□□□ -1.1
SMARCAL1-213ENST00000496037 A0A1W2PPW3 197 aa8.15□□□□□ -1.1
SMARCAL1-213ENST00000496037 DHHO43323 396 aa8.15□□□□□ -1.1
SMARCAL1-213ENST00000496037 SLC22A3O75751 556 aa8.15□□□□□ -1.1
SMARCAL1-213ENST00000496037 IGKV3-15P01624 115 aa8.15□□□□□ -1.1
SMARCAL1-213ENST00000496037 CELA3BP08861 270 aa8.15□□□□□ -1.1
SMARCAL1-213ENST00000496037 ALOX5P09917 674 aa8.15□□□□□ -1.1
SMARCAL1-213ENST00000496037 TFPIP10646 304 aa8.15□□□□□ -1.1
SMARCAL1-213ENST00000496037 NTSP30990 170 aa8.15□□□□□ -1.1
SMARCAL1-213ENST00000496037 PRKAA2P54646 552 aa8.15□□□□□ -1.1
SMARCAL1-213ENST00000496037 PROK1P58294 105 aa8.15□□□□□ -1.1
SMARCAL1-213ENST00000496037 TEKQ02763 1124 aa8.15□□□□□ -1.1
SMARCAL1-213ENST00000496037 NPRL3Q12980 569 aa8.15□□□□□ -1.1
SMARCAL1-213ENST00000496037 ZNF154Q13106 437 aa8.15□□□□□ -1.1
SMARCAL1-213ENST00000496037 QPRTQ15274 297 aa8.15□□□□□ -1.1
SMARCAL1-213ENST00000496037 TIGD2Q4W5G0 525 aa8.15□□□□□ -1.1
SMARCAL1-213ENST00000496037 KLHL22Q53GT1 634 aa8.15□□□□□ -1.1
SMARCAL1-213ENST00000496037 SLC25A53Q5H9E4 307 aa8.15□□□□□ -1.1
SMARCAL1-213ENST00000496037 EXOSC6Q5RKV6 272 aaKnown RBP8.15□□□□□ -1.1
SMARCAL1-213ENST00000496037 C9orf139Q6ZV77 190 aa8.15□□□□□ -1.1
SMARCAL1-213ENST00000496037 ZAR1Q86SH2 424 aa8.15□□□□□ -1.1
SMARCAL1-213ENST00000496037 ISCA2Q86U28 154 aa8.15□□□□□ -1.1
SMARCAL1-213ENST00000496037 PARP8Q8N3A8 854 aa8.15□□□□□ -1.1
SMARCAL1-213ENST00000496037 POMGNT2Q8NAT1 580 aa8.15□□□□□ -1.1
SMARCAL1-213ENST00000496037 IL17RDQ8NFM7 739 aa8.15□□□□□ -1.1
SMARCAL1-213ENST00000496037 RFWD2Q8NHY2 731 aa8.15□□□□□ -1.1
SMARCAL1-213ENST00000496037 FAM76AQ8TAV0 307 aa8.15□□□□□ -1.1
SMARCAL1-213ENST00000496037 GPR119Q8TDV5 335 aa8.15□□□□□ -1.1
SMARCAL1-213ENST00000496037 RAB1CQ92928 201 aa8.15□□□□□ -1.1
SMARCAL1-213ENST00000496037 UTP4Q969X6 686 aaKnown RBP8.15□□□□□ -1.1
SMARCAL1-213ENST00000496037 LRRC39Q96DD0 335 aa8.15□□□□□ -1.1
SMARCAL1-213ENST00000496037 KTI12Q96EK9 354 aaPredicted RBP8.15□□□□□ -1.1
SMARCAL1-213ENST00000496037 SLC47A1Q96FL8 570 aa8.15□□□□□ -1.1
SMARCAL1-213ENST00000496037 BOD1Q96IK1 185 aa8.15□□□□□ -1.1
SMARCAL1-213ENST00000496037 NOL11Q9H8H0 719 aaKnown RBP8.15□□□□□ -1.1
SMARCAL1-213ENST00000496037 NMRAL1Q9HBL8 299 aa8.15□□□□□ -1.1
SMARCAL1-213ENST00000496037 NOX3Q9HBY0 568 aa8.15□□□□□ -1.1
SMARCAL1-213ENST00000496037 CRLF2Q9HC73 371 aa8.15□□□□□ -1.1
SMARCAL1-213ENST00000496037 TBCCD1Q9NVR7 557 aa8.15□□□□□ -1.1
SMARCAL1-213ENST00000496037 UBAP1Q9NZ09 502 aa8.15□□□□□ -1.1
SMARCAL1-213ENST00000496037 TXNDC16Q9P2K2 825 aa8.15□□□□□ -1.1
SMARCAL1-213ENST00000496037 ZNF346Q9UL40 294 aaKnown RBP8.15□□□□□ -1.1
SMARCAL1-213ENST00000496037 WIPI2Q9Y4P8 454 aa8.15□□□□□ -1.1
SMARCAL1-213ENST00000496037 NOX1Q9Y5S8 564 aa8.15□□□□□ -1.1
SMARCAL1-213ENST00000496037 SPIN1Q9Y657 262 aaPredicted RBP8.15□□□□□ -1.1
SMARCAL1-213ENST00000496037 PCLOQ9Y6V0 5065 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms