RNA–Protein interactions for RNA: ENST00000495293.5

RBM39-240, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 759 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-240ENST00000495293 TTC36A6NLP5 189 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 EVPLLA8MZ36 301 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 MYO1GB0I1T2 1018 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 NPIPA5E9PKD4 350 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 G3V2T6 193 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 H0YAE9 185 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 LSM1O15116 133 aaKnown RBP4.07□□□□□ -1.76
RBM39-240ENST00000495293 ACOX3O15254 700 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 HS6ST1O60243 411 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 PRKNO60260 465 aaPredicted RBP4.07□□□□□ -1.76
RBM39-240ENST00000495293 CDC40O60508 579 aaKnown RBP eCLIP4.07□□□□□ -1.76
RBM39-240ENST00000495293 REM1O75628 298 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 NEURL1O76050 574 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 SOX30O94993 753 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 OR6B1O95007 311 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 SNX4O95219 450 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 LRATO95237 230 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 IGKV3-11P04433 115 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 IL6P05231 212 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 TFAP2AP05549 437 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 SPARCP09486 303 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 THRBP10828 461 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 BCKDHAP12694 445 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 ABOP16442 354 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 ZNF26P17031 533 aaPredicted RBP4.07□□□□□ -1.76
RBM39-240ENST00000495293 NAGAP17050 411 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 SDC1P18827 310 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 PRPS1L1P21108 318 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 DRD5P21918 477 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 HTR1EP28566 365 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 IL12BP29460 328 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 SOX3P41225 446 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 PPICP45877 212 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 PCP4P48539 62 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 SERPINB10P48595 397 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 GSK3BP49841 420 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 RAD23AP54725 363 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 HPCAP84074 193 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 EMX2Q04743 252 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 PLCXD2Q0VAA5 305 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 ZNF155Q12901 538 aaPredicted RBP4.07□□□□□ -1.76
RBM39-240ENST00000495293 HSPB3Q12988 150 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 APOFQ13790 326 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 EXOSC7Q15024 291 aaKnown RBP4.07□□□□□ -1.76
RBM39-240ENST00000495293 KIAA0040Q15053 153 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 EBPQ15125 230 aaKnown RBP4.07□□□□□ -1.76
RBM39-240ENST00000495293 ATP6AP1Q15904 470 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 EIF2S3LQ2VIR3 472 aaKnown RBP4.07□□□□□ -1.76
RBM39-240ENST00000495293 RFX4Q33E94 735 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 ODF3L2Q3SX64 289 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 UGT3A2Q3SY77 523 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 TRMT12Q53H54 448 aaKnown RBP4.07□□□□□ -1.76
RBM39-240ENST00000495293 PRR30Q53SZ7 412 aaPredicted RBP4.07□□□□□ -1.76
RBM39-240ENST00000495293 ZNF628Q5EBL2 1059 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 RBM48Q5RL73 367 aaKnown RBP4.07□□□□□ -1.76
RBM39-240ENST00000495293 C6orf136Q5SQH8 315 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 OTUD3Q5T2D3 398 aaPredicted RBP4.07□□□□□ -1.76
RBM39-240ENST00000495293 GPR139Q6DWJ6 353 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 GLYATQ6IB77 296 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 FAM71E1Q6IPT2 247 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 MTFR2Q6P444 385 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 BHLHB9Q6PI77 547 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 TMEM107Q6UX40 140 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 DEF8Q6ZN54 512 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 C16orf47Q6ZP98 133 aaPredicted RBP4.07□□□□□ -1.76
RBM39-240ENST00000495293 DGAT2L6Q6ZPD8 337 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 NUP54Q7Z3B4 507 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 PATL1Q86TB9 770 aaKnown RBP4.07□□□□□ -1.76
RBM39-240ENST00000495293 SLC22A16Q86VW1 577 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 CARM1Q86X55 608 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 CHERPQ8IWX8 916 aaKnown RBP4.07□□□□□ -1.76
RBM39-240ENST00000495293 C9orf40Q8IXQ3 194 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 C8orf59Q8N0T1 100 aaPredicted RBP4.07□□□□□ -1.76
RBM39-240ENST00000495293 GHDCQ8N2G8 530 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 SVOPLQ8N434 492 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 LIX1Q8N485 282 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 SETD9Q8NE22 299 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 OR2T12Q8NG77 320 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 OR8J3Q8NGG0 315 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 OR9I1Q8NGQ6 314 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 OR9A2Q8NGT5 310 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 OR2T11Q8NH01 316 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 ZNF675Q8TD23 568 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 FIG4Q92562 907 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 NR4A3Q92570 626 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 KAT2AQ92830 837 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 BORCS5Q969J3 196 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 SPACA9Q96E40 222 aaPredicted RBP4.07□□□□□ -1.76
RBM39-240ENST00000495293 JSRP1Q96MG2 331 aaPredicted RBP4.07□□□□□ -1.76
RBM39-240ENST00000495293 ZNF681Q96N22 645 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 RDH12Q96NR8 316 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 SECISBP2Q96T21 854 aaKnown RBP4.07□□□□□ -1.76
RBM39-240ENST00000495293 RBM4BQ9BQ04 359 aaKnown RBP4.07□□□□□ -1.76
RBM39-240ENST00000495293 FAM173AQ9BQD7 235 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 TUBA1CQ9BQE3 449 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 GPATCH1Q9BRR8 931 aaKnown RBP4.07□□□□□ -1.76
RBM39-240ENST00000495293 DOHHQ9BU89 302 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 RBM4Q9BWF3 364 aaKnown RBP4.07□□□□□ -1.76
RBM39-240ENST00000495293 OR10A4Q9H209 315 aa4.07□□□□□ -1.76
RBM39-240ENST00000495293 TUBB1Q9H4B7 451 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms